RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 LMO7Q8WWI1 1683 aa21.99■■□□□ 1.11
SLC6A4-202ENST00000394821 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
SLC6A4-202ENST00000394821 LMOD3Q0VAK6 560 aa21.98■■□□□ 1.11
SLC6A4-202ENST00000394821 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
SLC6A4-202ENST00000394821 ZNF853P0CG23 659 aa21.97■■□□□ 1.11
SLC6A4-202ENST00000394821 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
SLC6A4-202ENST00000394821 MBIPQ9NS73 344 aa21.97■■□□□ 1.11
SLC6A4-202ENST00000394821 MIS18AQ9NYP9 233 aa21.97■■□□□ 1.11
SLC6A4-202ENST00000394821 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
SLC6A4-202ENST00000394821 IL17REQ8NFR9 667 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 CERKQ8TCT0 537 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 IFT57Q9NWB7 429 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 COL5A2P05997 1499 aaPredicted RBP21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 CRB1P82279 1406 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 ABCC6O95255 1503 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 GNAT3A8MTJ3 354 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 RARSP54136 660 aaKnown RBP21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
SLC6A4-202ENST00000394821 COL22A1Q8NFW1 1626 aaPredicted RBP21.93■■□□□ 1.1
SLC6A4-202ENST00000394821 TSPYL6Q8N831 410 aa21.93■■□□□ 1.1
SLC6A4-202ENST00000394821 MEGF6O75095 1541 aa21.93■■□□□ 1.1
SLC6A4-202ENST00000394821 GNAI1P63096 354 aa21.92■■□□□ 1.1
SLC6A4-202ENST00000394821 RTF1Q92541 710 aaKnown RBP21.92■■□□□ 1.1
SLC6A4-202ENST00000394821 ELL2O00472 640 aaPredicted RBP21.92■■□□□ 1.1
SLC6A4-202ENST00000394821 LARP1Q6PKG0 1096 aaKnown RBP21.92■■□□□ 1.1
SLC6A4-202ENST00000394821 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
SLC6A4-202ENST00000394821 MAP3K5Q99683 1374 aa21.92■■□□□ 1.1
SLC6A4-202ENST00000394821 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
SLC6A4-202ENST00000394821 ZNF530Q6P9A1 599 aaPredicted RBP21.91■■□□□ 1.1
SLC6A4-202ENST00000394821 CALD1Q05682 793 aaKnown RBP21.91■■□□□ 1.1
SLC6A4-202ENST00000394821 WDR17Q8IZU2 1322 aa21.9■■□□□ 1.1
SLC6A4-202ENST00000394821 ADAMTS2O95450 1211 aa21.9■■□□□ 1.1
SLC6A4-202ENST00000394821 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
SLC6A4-202ENST00000394821 BTG4Q9NY30 223 aa21.9■■□□□ 1.1
SLC6A4-202ENST00000394821 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.1
SLC6A4-202ENST00000394821 C8orf58Q8NAV2 365 aa21.89■■□□□ 1.1
SLC6A4-202ENST00000394821 NUTM2BA6NNL0 878 aaPredicted RBP21.89■■□□□ 1.09
SLC6A4-202ENST00000394821 NUTM2EB1AL46 878 aaPredicted RBP21.89■■□□□ 1.09
SLC6A4-202ENST00000394821 CHL1O00533 1208 aa21.89■■□□□ 1.09
SLC6A4-202ENST00000394821 NUTM2AQ8IVF1 878 aaPredicted RBP21.89■■□□□ 1.09
SLC6A4-202ENST00000394821 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
SLC6A4-202ENST00000394821 RAPGEF4Q8WZA2 1011 aa21.88■■□□□ 1.09
SLC6A4-202ENST00000394821 TNNQ9UQP3 1299 aa21.88■■□□□ 1.09
SLC6A4-202ENST00000394821 EVA1CP58658 441 aa21.87■■□□□ 1.09
SLC6A4-202ENST00000394821 USP35Q9P2H5 1018 aa21.87■■□□□ 1.09
SLC6A4-202ENST00000394821 LRRC37A3O60309 1634 aa21.87■■□□□ 1.09
SLC6A4-202ENST00000394821 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
SLC6A4-202ENST00000394821 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
SLC6A4-202ENST00000394821 TCERG1O14776 1098 aaKnown RBP21.86■■□□□ 1.09
SLC6A4-202ENST00000394821 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
SLC6A4-202ENST00000394821 HTATSF1O43719 755 aaKnown RBP21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 AMOTQ4VCS5 1084 aa21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 AKAP4Q5JQC9 854 aa21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 VAMP4O75379 141 aa21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 TATP17735 454 aaPredicted RBP21.85■■□□□ 1.09
SLC6A4-202ENST00000394821 PANK1Q8TE04 598 aa21.84■■□□□ 1.09
SLC6A4-202ENST00000394821 COL14A1Q05707 1796 aaKnown RBP21.83■■□□□ 1.09
SLC6A4-202ENST00000394821 TSPYL4Q9UJ04 414 aa21.83■■□□□ 1.09
SLC6A4-202ENST00000394821 CEMIPQ8WUJ3 1361 aa21.82■■□□□ 1.08
SLC6A4-202ENST00000394821 TWISTNBQ3B726 338 aaPredicted RBP21.82■■□□□ 1.08
SLC6A4-202ENST00000394821 C1orf141Q5JVX7 400 aa21.82■■□□□ 1.08
SLC6A4-202ENST00000394821 SKAP1Q86WV1 359 aa21.82■■□□□ 1.08
SLC6A4-202ENST00000394821 CANXP27824 592 aaKnown RBP21.81■■□□□ 1.08
SLC6A4-202ENST00000394821 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
SLC6A4-202ENST00000394821 SMC4Q9NTJ3 1288 aa21.81■■□□□ 1.08
SLC6A4-202ENST00000394821 CT47B1P0C2W7 299 aaPredicted RBP21.81■■□□□ 1.08
SLC6A4-202ENST00000394821 COG6Q9Y2V7 657 aa21.81■■□□□ 1.08
SLC6A4-202ENST00000394821 CYP27B1O15528 508 aa21.8■■□□□ 1.08
SLC6A4-202ENST00000394821 RNMTO43148 476 aaKnown RBP21.8■■□□□ 1.08
SLC6A4-202ENST00000394821 RLBP1P12271 317 aa21.8■■□□□ 1.08
SLC6A4-202ENST00000394821 PHKG2P15735 406 aa21.79■■□□□ 1.08
SLC6A4-202ENST00000394821 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
SLC6A4-202ENST00000394821 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
SLC6A4-202ENST00000394821 KCNQ3O43525 872 aa21.78■■□□□ 1.08
SLC6A4-202ENST00000394821 PKD1L3Q7Z443 1732 aa21.78■■□□□ 1.08
SLC6A4-202ENST00000394821 CENPQQ7L2Z9 268 aaPredicted RBP21.78■■□□□ 1.08
SLC6A4-202ENST00000394821 SPG7Q9UQ90 795 aa21.78■■□□□ 1.08
SLC6A4-202ENST00000394821 OVOS2A0A0G2JMS6 1433 aa21.78■■□□□ 1.08
SLC6A4-202ENST00000394821 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
SLC6A4-202ENST00000394821 CLUAP1Q96AJ1 413 aa21.77■■□□□ 1.08
SLC6A4-202ENST00000394821 NOB1Q9ULX3 412 aaKnown RBP21.76■■□□□ 1.07
SLC6A4-202ENST00000394821 IL2RBP14784 551 aa21.75■■□□□ 1.07
SLC6A4-202ENST00000394821 HSPA1LP34931 641 aa21.75■■□□□ 1.07
SLC6A4-202ENST00000394821 PARP4Q9UKK3 1724 aaKnown RBP21.75■■□□□ 1.07
SLC6A4-202ENST00000394821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.07
SLC6A4-202ENST00000394821 TEFQ10587 303 aa21.74■■□□□ 1.07
SLC6A4-202ENST00000394821 IFNL2Q8IZJ0 200 aa21.74■■□□□ 1.07
SLC6A4-202ENST00000394821 ADAMTS7Q9UKP4 1686 aa21.74■■□□□ 1.07
SLC6A4-202ENST00000394821 SHANK3Q9BYB0 1731 aa21.73■■□□□ 1.07
SLC6A4-202ENST00000394821 SCN11AQ9UI33 1791 aa21.73■■□□□ 1.07
SLC6A4-202ENST00000394821 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
SLC6A4-202ENST00000394821 ZCRB1Q8TBF4 217 aaKnown RBP21.73■■□□□ 1.07
SLC6A4-202ENST00000394821 JCADQ9P266 1359 aa21.73■■□□□ 1.07
SLC6A4-202ENST00000394821 ALDH1L2Q3SY69 923 aa21.72■■□□□ 1.07
SLC6A4-202ENST00000394821 NRAPQ86VF7 1730 aa21.72■■□□□ 1.07
SLC6A4-202ENST00000394821 SIPA1L3O60292 1781 aaPredicted RBP21.72■■□□□ 1.07
SLC6A4-202ENST00000394821 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms