RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 LGR6Q9HBX8 967 aa25.95■■□□□ 1.74
PRKCD-202ENST00000394729 GNAT3A8MTJ3 354 aa25.94■■□□□ 1.74
PRKCD-202ENST00000394729 HAP1P54257 671 aaPredicted RBP25.94■■□□□ 1.74
PRKCD-202ENST00000394729 IL17REQ8NFR9 667 aa25.94■■□□□ 1.74
PRKCD-202ENST00000394729 GAS2L2Q8NHY3 880 aa25.94■■□□□ 1.74
PRKCD-202ENST00000394729 MST1RQ04912 1400 aa25.94■■□□□ 1.74
PRKCD-202ENST00000394729 MARF1Q9Y4F3 1742 aaKnown RBP25.93■■□□□ 1.74
PRKCD-202ENST00000394729 MRPL50Q8N5N7 158 aaKnown RBP25.92■■□□□ 1.74
PRKCD-202ENST00000394729 CHL1O00533 1208 aa25.92■■□□□ 1.74
PRKCD-202ENST00000394729 BRINP3Q76B58 766 aa25.92■■□□□ 1.74
PRKCD-202ENST00000394729 CT47B1P0C2W7 299 aaPredicted RBP25.91■■□□□ 1.74
PRKCD-202ENST00000394729 LTN1O94822 1766 aa25.91■■□□□ 1.74
PRKCD-202ENST00000394729 KIF16BQ96L93 1317 aa25.91■■□□□ 1.74
PRKCD-202ENST00000394729 IPO8O15397 1037 aaKnown RBP25.9■■□□□ 1.74
PRKCD-202ENST00000394729 KDRP35968 1356 aa25.9■■□□□ 1.74
PRKCD-202ENST00000394729 ZNF530Q6P9A1 599 aaPredicted RBP25.9■■□□□ 1.74
PRKCD-202ENST00000394729 PDE4AP27815 886 aa25.89■■□□□ 1.74
PRKCD-202ENST00000394729 SLAIN2Q9P270 581 aa25.89■■□□□ 1.73
PRKCD-202ENST00000394729 SLC4A2P04920 1241 aa25.88■■□□□ 1.73
PRKCD-202ENST00000394729 NWD1Q149M9 1564 aa25.88■■□□□ 1.73
PRKCD-202ENST00000394729 SLC4A10Q6U841 1118 aa25.88■■□□□ 1.73
PRKCD-202ENST00000394729 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
PRKCD-202ENST00000394729 F6X3S4 739 aa25.87■■□□□ 1.73
PRKCD-202ENST00000394729 ALDH1L2Q3SY69 923 aa25.87■■□□□ 1.73
PRKCD-202ENST00000394729 ZNF428Q96B54 188 aa25.87■■□□□ 1.73
PRKCD-202ENST00000394729 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
PRKCD-202ENST00000394729 NFAT5O94916 1531 aa25.86■■□□□ 1.73
PRKCD-202ENST00000394729 KCNQ3O43525 872 aa25.85■■□□□ 1.73
PRKCD-202ENST00000394729 G2E3Q7L622 706 aa25.85■■□□□ 1.73
PRKCD-202ENST00000394729 USP35Q9P2H5 1018 aa25.85■■□□□ 1.73
PRKCD-202ENST00000394729 RGPD1P0DJD0 1748 aa25.84■■□□□ 1.73
PRKCD-202ENST00000394729 DDX19BQ9UMR2 479 aa25.84■■□□□ 1.73
PRKCD-202ENST00000394729 CRB1P82279 1406 aa25.84■■□□□ 1.73
PRKCD-202ENST00000394729 RGPD2P0DJD1 1756 aa25.83■■□□□ 1.73
PRKCD-202ENST00000394729 MAP3K5Q99683 1374 aa25.82■■□□□ 1.72
PRKCD-202ENST00000394729 ANXA1P04083 346 aa25.81■■□□□ 1.72
PRKCD-202ENST00000394729 KIAA0232Q92628 1395 aa25.8■■□□□ 1.72
PRKCD-202ENST00000394729 MSH5O43196 834 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 STRN4Q9NRL3 753 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 PDZRN3Q9UPQ7 1066 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 ERBB3P21860 1342 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 STRCQ7RTU9 1775 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 TEFQ10587 303 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 C1orf141Q5JVX7 400 aa25.79■■□□□ 1.72
PRKCD-202ENST00000394729 MS4A1P11836 297 aa25.78■■□□□ 1.72
PRKCD-202ENST00000394729 PRDM11Q9NQV5 511 aa25.78■■□□□ 1.72
PRKCD-202ENST00000394729 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
PRKCD-202ENST00000394729 APBB1O00213 710 aa25.78■■□□□ 1.72
PRKCD-202ENST00000394729 USP19O94966 1318 aa25.78■■□□□ 1.72
PRKCD-202ENST00000394729 RWDD1Q9H446 243 aaPredicted RBP25.78■■□□□ 1.72
PRKCD-202ENST00000394729 TAF7Q15545 349 aaPredicted RBP25.77■■□□□ 1.72
PRKCD-202ENST00000394729 ZBTB40Q9NUA8 1239 aa25.77■■□□□ 1.72
PRKCD-202ENST00000394729 RAPGEF4Q8WZA2 1011 aa25.76■■□□□ 1.71
PRKCD-202ENST00000394729 SPATA31A3Q5VYP0 1347 aa25.76■■□□□ 1.71
PRKCD-202ENST00000394729 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
PRKCD-202ENST00000394729 BACH2Q9BYV9 841 aa25.76■■□□□ 1.71
PRKCD-202ENST00000394729 KIF24Q5T7B8 1368 aa25.75■■□□□ 1.71
PRKCD-202ENST00000394729 PRAMEF22A3QJZ6 481 aa25.74■■□□□ 1.71
PRKCD-202ENST00000394729 MED1Q15648 1581 aaPredicted RBP25.74■■□□□ 1.71
PRKCD-202ENST00000394729 SLC39A6Q13433 755 aa25.73■■□□□ 1.71
PRKCD-202ENST00000394729 RGPD5Q99666 1765 aa25.73■■□□□ 1.71
PRKCD-202ENST00000394729 BTBD11A6QL63 1104 aa25.73■■□□□ 1.71
PRKCD-202ENST00000394729 ZBTB7BO15156 539 aaPredicted RBP25.73■■□□□ 1.71
PRKCD-202ENST00000394729 FKBP5Q13451 457 aaPredicted RBP25.73■■□□□ 1.71
PRKCD-202ENST00000394729 PXDNQ92626 1479 aa25.73■■□□□ 1.71
PRKCD-202ENST00000394729 STK31Q9BXU1 1019 aa25.73■■□□□ 1.71
PRKCD-202ENST00000394729 LNPKQ9C0E8 428 aa25.72■■□□□ 1.71
PRKCD-202ENST00000394729 PHAXQ9H814 394 aaKnown RBP25.71■■□□□ 1.71
PRKCD-202ENST00000394729 HDGFL1Q5TGJ6 251 aa25.7■■□□□ 1.71
PRKCD-202ENST00000394729 TNS3Q68CZ2 1445 aa25.7■■□□□ 1.71
PRKCD-202ENST00000394729 TRPM3Q9HCF6 1732 aaPredicted RBP25.7■■□□□ 1.7
PRKCD-202ENST00000394729 TOM1L2Q6ZVM7 507 aa25.7■■□□□ 1.7
PRKCD-202ENST00000394729 API5Q9BZZ5 524 aaKnown RBP25.7■■□□□ 1.7
PRKCD-202ENST00000394729 MEIS3Q99687 375 aa25.69■■□□□ 1.7
PRKCD-202ENST00000394729 ANP32AP39687 249 aaKnown RBP25.68■■□□□ 1.7
PRKCD-202ENST00000394729 AKAP4Q5JQC9 854 aa25.68■■□□□ 1.7
PRKCD-202ENST00000394729 PIP4K2AP48426 406 aaPredicted RBP25.67■■□□□ 1.7
PRKCD-202ENST00000394729 ABCC4O15439 1325 aa25.66■■□□□ 1.7
PRKCD-202ENST00000394729 XIRP1Q702N8 1843 aaKnown RBP25.66■■□□□ 1.7
PRKCD-202ENST00000394729 RNMTO43148 476 aaKnown RBP25.66■■□□□ 1.7
PRKCD-202ENST00000394729 C8orf34Q49A92 452 aa25.65■■□□□ 1.7
PRKCD-202ENST00000394729 DCCP43146 1447 aa25.65■■□□□ 1.7
PRKCD-202ENST00000394729 TATP17735 454 aaPredicted RBP25.65■■□□□ 1.7
PRKCD-202ENST00000394729 ANKRD45Q5TZF3 282 aa25.65■■□□□ 1.7
PRKCD-202ENST00000394729 SLIT3O75094 1523 aa25.65■■□□□ 1.7
PRKCD-202ENST00000394729 PIP4K2BP78356 416 aa25.64■■□□□ 1.7
PRKCD-202ENST00000394729 FLIIQ13045 1269 aa25.64■■□□□ 1.7
PRKCD-202ENST00000394729 NFATC2IPQ8NCF5 419 aa25.64■■□□□ 1.7
PRKCD-202ENST00000394729 ARHGAP45Q92619 1136 aa25.64■■□□□ 1.7
PRKCD-202ENST00000394729 HTATSF1O43719 755 aaKnown RBP25.64■■□□□ 1.7
PRKCD-202ENST00000394729 SIRT2Q8IXJ6 389 aa25.64■■□□□ 1.7
PRKCD-202ENST00000394729 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.7
PRKCD-202ENST00000394729 KIF1AQ12756 1690 aa25.64■■□□□ 1.69
PRKCD-202ENST00000394729 AMOTQ4VCS5 1084 aa25.63■■□□□ 1.69
PRKCD-202ENST00000394729 CCDC30Q5VVM6 783 aa25.63■■□□□ 1.69
PRKCD-202ENST00000394729 DDX54Q8TDD1 881 aaKnown RBP25.63■■□□□ 1.69
PRKCD-202ENST00000394729 SEC24BO95487 1268 aa25.63■■□□□ 1.69
PRKCD-202ENST00000394729 EVA1CP58658 441 aa25.63■■□□□ 1.69
PRKCD-202ENST00000394729 FAM161AQ3B820 660 aa25.63■■□□□ 1.69
PRKCD-202ENST00000394729 BRPF1P55201 1214 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms