RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CRISPLD2Q9H0B8 497 aa9.2□□□□□ -0.94
RTN4-205ENST00000394609 ACEP12821 1306 aa9.2□□□□□ -0.94
RTN4-205ENST00000394609 NEFLP07196 543 aa9.19□□□□□ -0.94
RTN4-205ENST00000394609 PDE4AP27815 886 aa9.19□□□□□ -0.94
RTN4-205ENST00000394609 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
RTN4-205ENST00000394609 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
RTN4-205ENST00000394609 PLEKHG3A1L390 1219 aa9.19□□□□□ -0.94
RTN4-205ENST00000394609 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
RTN4-205ENST00000394609 ERICH6BQ5W0A0 696 aa9.19□□□□□ -0.94
RTN4-205ENST00000394609 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
RTN4-205ENST00000394609 PSEN2P49810 448 aa9.18□□□□□ -0.94
RTN4-205ENST00000394609 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
RTN4-205ENST00000394609 NGDNQ8NEJ9 315 aaKnown RBP9.18□□□□□ -0.94
RTN4-205ENST00000394609 CFAP53Q96M91 514 aa9.18□□□□□ -0.94
RTN4-205ENST00000394609 RBM19Q9Y4C8 960 aaKnown RBP9.18□□□□□ -0.94
RTN4-205ENST00000394609 USP32Q8NFA0 1604 aa9.18□□□□□ -0.94
RTN4-205ENST00000394609 BLMP54132 1417 aaPredicted RBP9.17□□□□□ -0.94
RTN4-205ENST00000394609 EDC4Q6P2E9 1401 aaKnown RBP9.17□□□□□ -0.94
RTN4-205ENST00000394609 HRO43593 1189 aa9.17□□□□□ -0.94
RTN4-205ENST00000394609 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
RTN4-205ENST00000394609 APAF1O14727 1248 aa9.17□□□□□ -0.94
RTN4-205ENST00000394609 PROSER2Q86WR7 435 aaPredicted RBP9.17□□□□□ -0.94
RTN4-205ENST00000394609 COG3Q96JB2 828 aa9.17□□□□□ -0.94
RTN4-205ENST00000394609 ADGRB2O60241 1585 aa9.17□□□□□ -0.94
RTN4-205ENST00000394609 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
RTN4-205ENST00000394609 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
RTN4-205ENST00000394609 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
RTN4-205ENST00000394609 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
RTN4-205ENST00000394609 POLKQ9UBT6 870 aa9.16□□□□□ -0.94
RTN4-205ENST00000394609 INSRP06213 1382 aa9.16□□□□□ -0.94
RTN4-205ENST00000394609 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.94
RTN4-205ENST00000394609 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
RTN4-205ENST00000394609 UPF1Q92900 1129 aaKnown RBP eCLIP9.15□□□□□ -0.948e-30■■□□□ 13.3
RTN4-205ENST00000394609 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
RTN4-205ENST00000394609 PLA2G2EQ9NZK7 142 aa9.15□□□□□ -0.94
RTN4-205ENST00000394609 NUDCQ9Y266 331 aa9.15□□□□□ -0.94
RTN4-205ENST00000394609 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.94
RTN4-205ENST00000394609 RRS1Q15050 365 aaKnown RBP9.15□□□□□ -0.95
RTN4-205ENST00000394609 EMILIN1Q9Y6C2 1016 aa9.15□□□□□ -0.95
RTN4-205ENST00000394609 USP6P35125 1406 aa9.14□□□□□ -0.95
RTN4-205ENST00000394609 IRX6P78412 446 aaPredicted RBP9.14□□□□□ -0.95
RTN4-205ENST00000394609 ESCO1Q5FWF5 840 aa9.14□□□□□ -0.95
RTN4-205ENST00000394609 ZNF454Q8N9F8 522 aa9.14□□□□□ -0.95
RTN4-205ENST00000394609 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
RTN4-205ENST00000394609 SLC4A5Q9BY07 1137 aa9.13□□□□□ -0.95
RTN4-205ENST00000394609 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
RTN4-205ENST00000394609 DIAPH1O60610 1272 aaKnown RBP9.13□□□□□ -0.95
RTN4-205ENST00000394609 PDE3BQ13370 1112 aa9.13□□□□□ -0.95
RTN4-205ENST00000394609 NEUROD2Q15784 382 aa9.13□□□□□ -0.95
RTN4-205ENST00000394609 NUTM2GQ5VZR2 741 aa9.13□□□□□ -0.95
RTN4-205ENST00000394609 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
RTN4-205ENST00000394609 CHD2O14647 1828 aaKnown RBP9.12□□□□□ -0.95
RTN4-205ENST00000394609 ANKARQ7Z5J8 1434 aa9.12□□□□□ -0.95
RTN4-205ENST00000394609 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
RTN4-205ENST00000394609 RUNDC1Q96C34 613 aa9.12□□□□□ -0.95
RTN4-205ENST00000394609 ORAI2Q96SN7 254 aa9.12□□□□□ -0.95
RTN4-205ENST00000394609 TCP11L2Q8N4U5 519 aa9.11□□□□□ -0.95
RTN4-205ENST00000394609 SSH2Q76I76 1423 aa9.11□□□□□ -0.95
RTN4-205ENST00000394609 FOSBP53539 338 aa9.11□□□□□ -0.95
RTN4-205ENST00000394609 PSME1Q06323 249 aa9.11□□□□□ -0.95
RTN4-205ENST00000394609 C19orf44Q9H6X5 657 aa9.11□□□□□ -0.95
RTN4-205ENST00000394609 PNPLA6Q8IY17 1366 aa9.11□□□□□ -0.95
RTN4-205ENST00000394609 LMTK3Q96Q04 1460 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 TTC21AQ8NDW8 1320 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 ZNF521Q96K83 1311 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 TOPAZ1Q8N9V7 1692 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 TMEM94Q12767 1356 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 FOXO3O43524 673 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 PTPREP23469 700 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 XPCQ01831 940 aaPredicted RBP9.1□□□□□ -0.95
RTN4-205ENST00000394609 ABTB2Q8N961 1025 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 KCTD12Q96CX2 325 aaKnown RBP9.1□□□□□ -0.95
RTN4-205ENST00000394609 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
RTN4-205ENST00000394609 AATKQ6ZMQ8 1374 aa9.09□□□□□ -0.95
RTN4-205ENST00000394609 GTPBP6O43824 516 aaPredicted RBP9.09□□□□□ -0.95
RTN4-205ENST00000394609 DDX27Q96GQ7 796 aaKnown RBP9.09□□□□□ -0.95
RTN4-205ENST00000394609 ANO8Q9HCE9 1232 aaPredicted RBP9.09□□□□□ -0.95
RTN4-205ENST00000394609 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
RTN4-205ENST00000394609 COL3A1P02461 1466 aaPredicted RBP9.09□□□□□ -0.95
RTN4-205ENST00000394609 MON2Q7Z3U7 1717 aa9.09□□□□□ -0.95
RTN4-205ENST00000394609 NALCNQ8IZF0 1738 aa9.09□□□□□ -0.95
RTN4-205ENST00000394609 HMOX1P09601 288 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 RGPD8O14715 1765 aaPredicted RBP9.08□□□□□ -0.96
RTN4-205ENST00000394609 AKAP12Q02952 1782 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 SHPRHQ149N8 1683 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 EVI5O60447 810 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 ATF3P18847 181 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 IL13P35225 146 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 PLEKHF1Q96S99 279 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 RCAN3Q9UKA8 241 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 ITSN1Q15811 1721 aa9.08□□□□□ -0.96
RTN4-205ENST00000394609 FMN2Q9NZ56 1722 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 ANKRD26Q9UPS8 1709 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 SLFN5Q08AF3 891 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 MFSD10Q14728 455 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 DUSP27Q5VZP5 1158 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms