RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 BCL9O00512 1426 aa11.7□□□□□ -0.54
APLF-202ENST00000394342 IL2RBP14784 551 aa11.7□□□□□ -0.54
APLF-202ENST00000394342 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
APLF-202ENST00000394342 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
APLF-202ENST00000394342 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
APLF-202ENST00000394342 EXOC5O00471 708 aa11.69□□□□□ -0.54
APLF-202ENST00000394342 PER1O15534 1290 aaPredicted RBP11.69□□□□□ -0.54
APLF-202ENST00000394342 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
APLF-202ENST00000394342 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
APLF-202ENST00000394342 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
APLF-202ENST00000394342 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
APLF-202ENST00000394342 MORC1Q86VD1 984 aa11.68□□□□□ -0.54
APLF-202ENST00000394342 MEGF6O75095 1541 aa11.67□□□□□ -0.54
APLF-202ENST00000394342 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
APLF-202ENST00000394342 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
APLF-202ENST00000394342 BAG6P46379 1132 aa11.67□□□□□ -0.54
APLF-202ENST00000394342 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
APLF-202ENST00000394342 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
APLF-202ENST00000394342 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
APLF-202ENST00000394342 TRIM37O94972 964 aa11.66□□□□□ -0.54
APLF-202ENST00000394342 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
APLF-202ENST00000394342 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
APLF-202ENST00000394342 SRCAPQ6ZRS2 3230 aa11.65□□□□□ -0.54
APLF-202ENST00000394342 PARD3Q8TEW0 1356 aa11.65□□□□□ -0.55
APLF-202ENST00000394342 LY75O60449 1722 aa11.64□□□□□ -0.55
APLF-202ENST00000394342 USHBP1Q8N6Y0 703 aa11.64□□□□□ -0.55
APLF-202ENST00000394342 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
APLF-202ENST00000394342 TATP17735 454 aaPredicted RBP11.63□□□□□ -0.55
APLF-202ENST00000394342 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
APLF-202ENST00000394342 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
APLF-202ENST00000394342 PLEKHG2Q9H7P9 1386 aa11.63□□□□□ -0.55
APLF-202ENST00000394342 APBA3O96018 575 aa11.62□□□□□ -0.55
APLF-202ENST00000394342 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
APLF-202ENST00000394342 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
APLF-202ENST00000394342 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
APLF-202ENST00000394342 ZCRB1Q8TBF4 217 aaKnown RBP11.62□□□□□ -0.55
APLF-202ENST00000394342 EYA1Q99502 592 aa11.62□□□□□ -0.55
APLF-202ENST00000394342 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
APLF-202ENST00000394342 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
APLF-202ENST00000394342 CAMKK2Q96RR4 588 aa11.61□□□□□ -0.55
APLF-202ENST00000394342 IGSF1Q8N6C5 1336 aa11.6□□□□□ -0.55
APLF-202ENST00000394342 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
APLF-202ENST00000394342 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
APLF-202ENST00000394342 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
APLF-202ENST00000394342 PLSCR1O15162 318 aa11.59□□□□□ -0.55
APLF-202ENST00000394342 MTHFSP49914 203 aa11.59□□□□□ -0.55
APLF-202ENST00000394342 EZH2Q15910 746 aaKnown RBP11.59□□□□□ -0.55
APLF-202ENST00000394342 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
APLF-202ENST00000394342 TUBGCP6Q96RT7 1819 aa11.58□□□□□ -0.56
APLF-202ENST00000394342 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
APLF-202ENST00000394342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.58□□□□□ -0.56
APLF-202ENST00000394342 IL13P35225 146 aa11.57□□□□□ -0.56
APLF-202ENST00000394342 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
APLF-202ENST00000394342 ACSBG1Q96GR2 724 aa11.57□□□□□ -0.56
APLF-202ENST00000394342 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
APLF-202ENST00000394342 KDRP35968 1356 aa11.56□□□□□ -0.56
APLF-202ENST00000394342 KCNQ2O43526 872 aa11.56□□□□□ -0.56
APLF-202ENST00000394342 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
APLF-202ENST00000394342 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
APLF-202ENST00000394342 C5P01031 1676 aa11.55□□□□□ -0.56
APLF-202ENST00000394342 CYP27B1O15528 508 aa11.55□□□□□ -0.56
APLF-202ENST00000394342 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
APLF-202ENST00000394342 LRP5O75197 1615 aa11.55□□□□□ -0.56
APLF-202ENST00000394342 CASZ1Q86V15 1759 aa11.54□□□□□ -0.56
APLF-202ENST00000394342 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
APLF-202ENST00000394342 CAPN15O75808 1086 aa11.54□□□□□ -0.56
APLF-202ENST00000394342 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
APLF-202ENST00000394342 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
APLF-202ENST00000394342 SULT6B1Q6IMI4 303 aa11.53□□□□□ -0.56
APLF-202ENST00000394342 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
APLF-202ENST00000394342 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
APLF-202ENST00000394342 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
APLF-202ENST00000394342 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.56
APLF-202ENST00000394342 SIPA1L3O60292 1781 aaPredicted RBP11.52□□□□□ -0.57
APLF-202ENST00000394342 PHKG2P15735 406 aa11.52□□□□□ -0.57
APLF-202ENST00000394342 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
APLF-202ENST00000394342 AMOTQ4VCS5 1084 aa11.52□□□□□ -0.57
APLF-202ENST00000394342 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.57
APLF-202ENST00000394342 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
APLF-202ENST00000394342 SYTL4Q96C24 671 aaPredicted RBP11.52□□□□□ -0.57
APLF-202ENST00000394342 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
APLF-202ENST00000394342 ZNF831Q5JPB2 1677 aa11.52□□□□□ -0.57
APLF-202ENST00000394342 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
APLF-202ENST00000394342 TXNRD1Q16881 649 aa11.51□□□□□ -0.57
APLF-202ENST00000394342 PROM2Q8N271 834 aa11.51□□□□□ -0.57
APLF-202ENST00000394342 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
APLF-202ENST00000394342 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
APLF-202ENST00000394342 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
APLF-202ENST00000394342 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
APLF-202ENST00000394342 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
APLF-202ENST00000394342 SLC27A3Q5K4L6 730 aa11.49□□□□□ -0.57
APLF-202ENST00000394342 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
APLF-202ENST00000394342 COL24A1Q17RW2 1714 aa11.49□□□□□ -0.57
APLF-202ENST00000394342 HMOX1P09601 288 aa11.48□□□□□ -0.57
APLF-202ENST00000394342 RALBP1Q15311 655 aa11.48□□□□□ -0.57
APLF-202ENST00000394342 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
APLF-202ENST00000394342 NUDCQ9Y266 331 aa11.48□□□□□ -0.57
APLF-202ENST00000394342 KDM6AO15550 1401 aaPredicted RBP11.48□□□□□ -0.57
APLF-202ENST00000394342 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
APLF-202ENST00000394342 UBR2Q8IWV8 1755 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms