RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 KCNH5Q8NCM2 988 aa22.11■■□□□ 1.13
TGFA-202ENST00000394241 KNSTRNQ9Y448 316 aa22.11■■□□□ 1.13
TGFA-202ENST00000394241 BTAF1O14981 1849 aa22.1■■□□□ 1.13
TGFA-202ENST00000394241 KAT6BQ8WYB5 2073 aa22.1■■□□□ 1.13
TGFA-202ENST00000394241 ZNF827Q17R98 1081 aa22.1■■□□□ 1.13
TGFA-202ENST00000394241 PELP1Q8IZL8 1130 aaKnown RBP22.1■■□□□ 1.13
TGFA-202ENST00000394241 ACSBG1Q96GR2 724 aa22.1■■□□□ 1.13
TGFA-202ENST00000394241 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
TGFA-202ENST00000394241 NSD2O96028 1365 aa22.1■■□□□ 1.13
TGFA-202ENST00000394241 GOLGB1Q14789 3259 aaKnown RBP22.09■■□□□ 1.13
TGFA-202ENST00000394241 ABCC6O95255 1503 aa22.08■■□□□ 1.13
TGFA-202ENST00000394241 SOX12O15370 315 aa22.08■■□□□ 1.13
TGFA-202ENST00000394241 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
TGFA-202ENST00000394241 QSER1Q2KHR3 1735 aa22.07■■□□□ 1.12
TGFA-202ENST00000394241 LTN1O94822 1766 aa22.07■■□□□ 1.12
TGFA-202ENST00000394241 POLD1P28340 1107 aa22.06■■□□□ 1.12
TGFA-202ENST00000394241 SLC16A10Q8TF71 515 aa22.06■■□□□ 1.12
TGFA-202ENST00000394241 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
TGFA-202ENST00000394241 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
TGFA-202ENST00000394241 PER1O15534 1290 aaPredicted RBP22.03■■□□□ 1.12
TGFA-202ENST00000394241 AMER1Q5JTC6 1135 aaPredicted RBP22.02■■□□□ 1.12
TGFA-202ENST00000394241 NLGN2Q8NFZ4 835 aa22.02■■□□□ 1.12
TGFA-202ENST00000394241 AKT1S1Q96B36 256 aa22.02■■□□□ 1.12
TGFA-202ENST00000394241 NPC1L1Q9UHC9 1359 aa22■■□□□ 1.11
TGFA-202ENST00000394241 TUBGCP6Q96RT7 1819 aa21.99■■□□□ 1.11
TGFA-202ENST00000394241 GRIN3BO60391 1043 aa21.99■■□□□ 1.11
TGFA-202ENST00000394241 PNPLA7Q6ZV29 1317 aa21.99■■□□□ 1.11
TGFA-202ENST00000394241 IL2RBP14784 551 aa21.98■■□□□ 1.11
TGFA-202ENST00000394241 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
TGFA-202ENST00000394241 YBX3P16989 372 aaKnown RBP eCLIP21.97■■□□□ 1.11
TGFA-202ENST00000394241 SLC27A3Q5K4L6 730 aa21.97■■□□□ 1.11
TGFA-202ENST00000394241 MORC1Q86VD1 984 aa21.97■■□□□ 1.11
TGFA-202ENST00000394241 NLRP2Q9NX02 1062 aa21.97■■□□□ 1.11
TGFA-202ENST00000394241 RTL1A6NKG5 1358 aa21.97■■□□□ 1.11
TGFA-202ENST00000394241 TFCP2L1Q9NZI6 479 aa21.96■■□□□ 1.11
TGFA-202ENST00000394241 ERBB3P21860 1342 aa21.96■■□□□ 1.11
TGFA-202ENST00000394241 ATP10DQ9P241 1426 aa21.96■■□□□ 1.11
TGFA-202ENST00000394241 CC2D1BQ5T0F9 858 aaKnown RBP21.95■■□□□ 1.1
TGFA-202ENST00000394241 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
TGFA-202ENST00000394241 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
TGFA-202ENST00000394241 MAP2P11137 1827 aaKnown RBP21.93■■□□□ 1.1
TGFA-202ENST00000394241 FBLN1P23142 703 aa21.93■■□□□ 1.1
TGFA-202ENST00000394241 TNNT2P45379 298 aaPredicted RBP21.93■■□□□ 1.1
TGFA-202ENST00000394241 KIF24Q5T7B8 1368 aa21.92■■□□□ 1.1
TGFA-202ENST00000394241 AMPHP49418 695 aa21.92■■□□□ 1.1
TGFA-202ENST00000394241 FLT4P35916 1363 aa21.91■■□□□ 1.1
TGFA-202ENST00000394241 HSPA6P17066 643 aa21.91■■□□□ 1.1
TGFA-202ENST00000394241 CNGB1Q14028 1251 aaPredicted RBP21.91■■□□□ 1.1
TGFA-202ENST00000394241 GPBP1L1Q9HC44 474 aaPredicted RBP21.91■■□□□ 1.1
TGFA-202ENST00000394241 SMG6Q86US8 1419 aaKnown RBP21.9■■□□□ 1.1
TGFA-202ENST00000394241 FAM208AQ9UK61 1670 aaKnown RBP21.89■■□□□ 1.1
TGFA-202ENST00000394241 HOXC9P31274 260 aa21.89■■□□□ 1.09
TGFA-202ENST00000394241 KCNQ4P56696 695 aa21.89■■□□□ 1.09
TGFA-202ENST00000394241 IP6K1Q92551 441 aa21.89■■□□□ 1.09
TGFA-202ENST00000394241 EMILIN1Q9Y6C2 1016 aa21.89■■□□□ 1.09
TGFA-202ENST00000394241 LY75O60449 1722 aa21.89■■□□□ 1.09
TGFA-202ENST00000394241 ANKRD24Q8TF21 1146 aa21.87■■□□□ 1.09
TGFA-202ENST00000394241 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
TGFA-202ENST00000394241 DDX54Q8TDD1 881 aaKnown RBP21.86■■□□□ 1.09
TGFA-202ENST00000394241 POLKQ9UBT6 870 aa21.86■■□□□ 1.09
TGFA-202ENST00000394241 ADCY9O60503 1353 aa21.85■■□□□ 1.09
TGFA-202ENST00000394241 INSRP06213 1382 aa21.85■■□□□ 1.09
TGFA-202ENST00000394241 DOT1LQ8TEK3 1739 aa21.84■■□□□ 1.09
TGFA-202ENST00000394241 MSH5O43196 834 aa21.84■■□□□ 1.09
TGFA-202ENST00000394241 SYTL4Q96C24 671 aaPredicted RBP21.84■■□□□ 1.09
TGFA-202ENST00000394241 ZNF526Q8TF50 670 aaPredicted RBP21.83■■□□□ 1.09
TGFA-202ENST00000394241 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
TGFA-202ENST00000394241 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
TGFA-202ENST00000394241 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
TGFA-202ENST00000394241 LTV1Q96GA3 475 aaPredicted RBP21.81■■□□□ 1.08
TGFA-202ENST00000394241 MSL1Q68DK7 614 aa21.8■■□□□ 1.08
TGFA-202ENST00000394241 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
TGFA-202ENST00000394241 CD2APQ9Y5K6 639 aa21.8■■□□□ 1.08
TGFA-202ENST00000394241 RGPD2P0DJD1 1756 aa21.77■■□□□ 1.08
TGFA-202ENST00000394241 MTHFSP49914 203 aa21.77■■□□□ 1.08
TGFA-202ENST00000394241 RALBP1Q15311 655 aa21.76■■□□□ 1.07
TGFA-202ENST00000394241 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
TGFA-202ENST00000394241 C5P01031 1676 aa21.74■■□□□ 1.07
TGFA-202ENST00000394241 EIF4A2Q14240 407 aaKnown RBP21.73■■□□□ 1.07
TGFA-202ENST00000394241 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
TGFA-202ENST00000394241 KIF3CO14782 793 aa21.71■■□□□ 1.07
TGFA-202ENST00000394241 APLP1P51693 650 aa21.7■■□□□ 1.06
TGFA-202ENST00000394241 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
TGFA-202ENST00000394241 CFAP53Q96M91 514 aa21.7■■□□□ 1.06
TGFA-202ENST00000394241 PRKRIP1Q9H875 184 aaPredicted RBP21.7■■□□□ 1.06
TGFA-202ENST00000394241 MYBBP1AQ9BQG0 1328 aaKnown RBP21.7■■□□□ 1.06
TGFA-202ENST00000394241 NCAPD2Q15021 1401 aa21.7■■□□□ 1.06
TGFA-202ENST00000394241 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
TGFA-202ENST00000394241 NBPF6Q5VWK0 638 aa21.69■■□□□ 1.06
TGFA-202ENST00000394241 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
TGFA-202ENST00000394241 NBPF4Q96M43 638 aa21.69■■□□□ 1.06
TGFA-202ENST00000394241 IGSF1Q8N6C5 1336 aa21.68■■□□□ 1.06
TGFA-202ENST00000394241 USHBP1Q8N6Y0 703 aa21.67■■□□□ 1.06
TGFA-202ENST00000394241 MEGF6O75095 1541 aa21.66■■□□□ 1.06
TGFA-202ENST00000394241 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
TGFA-202ENST00000394241 HMGB2P26583 209 aaKnown RBP21.66■■□□□ 1.06
TGFA-202ENST00000394241 IL13P35225 146 aa21.66■■□□□ 1.06
TGFA-202ENST00000394241 EYA1Q99502 592 aa21.66■■□□□ 1.06
TGFA-202ENST00000394241 WWC3Q9ULE0 1092 aa21.66■■□□□ 1.06
TGFA-202ENST00000394241 ANP32CO43423 234 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms