RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 CRB1P82279 1406 aa30.47■■■□□ 2.47
CNN3-202ENST00000394202 MCM10Q7L590 875 aa30.46■■■□□ 2.47
CNN3-202ENST00000394202 SLIT2O94813 1529 aa30.46■■■□□ 2.47
CNN3-202ENST00000394202 PLEKHO1Q53GL0 409 aaPredicted RBP30.45■■■□□ 2.47
CNN3-202ENST00000394202 NGLY1Q96IV0 654 aa30.45■■■□□ 2.47
CNN3-202ENST00000394202 TATP17735 454 aaPredicted RBP30.45■■■□□ 2.46
CNN3-202ENST00000394202 E9PSI1 815 aa30.44■■■□□ 2.46
CNN3-202ENST00000394202 LMOD3Q0VAK6 560 aa30.43■■■□□ 2.46
CNN3-202ENST00000394202 AMOTQ4VCS5 1084 aa30.43■■■□□ 2.46
CNN3-202ENST00000394202 ZNF530Q6P9A1 599 aaPredicted RBP30.42■■■□□ 2.46
CNN3-202ENST00000394202 NRAPQ86VF7 1730 aa30.41■■■□□ 2.46
CNN3-202ENST00000394202 GNAT3A8MTJ3 354 aa30.41■■■□□ 2.46
CNN3-202ENST00000394202 MAP3K5Q99683 1374 aa30.4■■■□□ 2.46
CNN3-202ENST00000394202 IL17REQ8NFR9 667 aa30.39■■■□□ 2.46
CNN3-202ENST00000394202 BCL9LQ86UU0 1499 aa30.39■■■□□ 2.45
CNN3-202ENST00000394202 IL2RBP14784 551 aa30.38■■■□□ 2.45
CNN3-202ENST00000394202 FNBP4Q8N3X1 1017 aaPredicted RBP30.38■■■□□ 2.45
CNN3-202ENST00000394202 RTF1Q92541 710 aaKnown RBP30.38■■■□□ 2.45
CNN3-202ENST00000394202 TSR2Q969E8 191 aaKnown RBP30.38■■■□□ 2.45
CNN3-202ENST00000394202 IL16Q14005 1332 aa30.38■■■□□ 2.45
CNN3-202ENST00000394202 OVOS2A0A0G2JMS6 1433 aa30.37■■■□□ 2.45
CNN3-202ENST00000394202 UNC5CLQ8IV45 518 aa30.37■■■□□ 2.45
CNN3-202ENST00000394202 NWD2Q9ULI1 1742 aa30.36■■■□□ 2.45
CNN3-202ENST00000394202 AKAP4Q5JQC9 854 aa30.36■■■□□ 2.45
CNN3-202ENST00000394202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.36■■■□□ 2.457e-11■■■□□ 15.6
CNN3-202ENST00000394202 LAS1LQ9Y4W2 734 aaKnown RBP30.36■■■□□ 2.45
CNN3-202ENST00000394202 HTATSF1O43719 755 aaKnown RBP30.35■■■□□ 2.45
CNN3-202ENST00000394202 MEX3CQ5U5Q3 659 aaKnown RBP30.35■■■□□ 2.45
CNN3-202ENST00000394202 LGR6Q9HBX8 967 aa30.35■■■□□ 2.45
CNN3-202ENST00000394202 SPG7Q9UQ90 795 aa30.35■■■□□ 2.45
CNN3-202ENST00000394202 SPATA31A1Q5TZJ5 1347 aa30.35■■■□□ 2.45
CNN3-202ENST00000394202 MPRIPQ6WCQ1 1025 aa30.34■■■□□ 2.45
CNN3-202ENST00000394202 CYP27B1O15528 508 aa30.34■■■□□ 2.45
CNN3-202ENST00000394202 ZNF853P0CG23 659 aa30.33■■■□□ 2.45
CNN3-202ENST00000394202 C1orf141Q5JVX7 400 aa30.33■■■□□ 2.45
CNN3-202ENST00000394202 FANCIQ9NVI1 1328 aa30.33■■■□□ 2.45
CNN3-202ENST00000394202 MYH16Q9H6N6 1097 aa30.32■■■□□ 2.44
CNN3-202ENST00000394202 SPATA31A5Q5VU36 1347 aa30.32■■■□□ 2.44
CNN3-202ENST00000394202 SPATA31A7Q8IWB4 1347 aa30.32■■■□□ 2.44
CNN3-202ENST00000394202 CALD1Q05682 793 aaKnown RBP30.32■■■□□ 2.44
CNN3-202ENST00000394202 ZCRB1Q8TBF4 217 aaKnown RBP30.32■■■□□ 2.44
CNN3-202ENST00000394202 PHKG2P15735 406 aa30.31■■■□□ 2.44
CNN3-202ENST00000394202 USP21Q9UK80 565 aa30.31■■■□□ 2.44
CNN3-202ENST00000394202 CCDC9Q9Y3X0 531 aaKnown RBP30.31■■■□□ 2.44
CNN3-202ENST00000394202 CFAP44Q96MT7 982 aa30.3■■■□□ 2.44
CNN3-202ENST00000394202 IFT57Q9NWB7 429 aa30.3■■■□□ 2.44
CNN3-202ENST00000394202 DISP2A7MBM2 1401 aa30.3■■■□□ 2.44
CNN3-202ENST00000394202 PKD1L3Q7Z443 1732 aa30.3■■■□□ 2.44
CNN3-202ENST00000394202 FBXO41Q8TF61 875 aa30.3■■■□□ 2.44
CNN3-202ENST00000394202 PLEKHG2Q9H7P9 1386 aa30.3■■■□□ 2.44
CNN3-202ENST00000394202 MIS18AQ9NYP9 233 aa30.29■■■□□ 2.44
CNN3-202ENST00000394202 PARP4Q9UKK3 1724 aaKnown RBP30.29■■■□□ 2.44
CNN3-202ENST00000394202 CEMIPQ8WUJ3 1361 aa30.28■■■□□ 2.44
CNN3-202ENST00000394202 MBIPQ9NS73 344 aa30.28■■■□□ 2.44
CNN3-202ENST00000394202 SUPT16HQ9Y5B9 1047 aaKnown RBP30.28■■■□□ 2.44
CNN3-202ENST00000394202 GNAI1P63096 354 aa30.28■■■□□ 2.44
CNN3-202ENST00000394202 VPS72Q15906 364 aa30.27■■■□□ 2.44
CNN3-202ENST00000394202 IFNL2Q8IZJ0 200 aa30.27■■■□□ 2.44
CNN3-202ENST00000394202 AFF2P51816 1311 aa30.27■■■□□ 2.44
CNN3-202ENST00000394202 RNMTO43148 476 aaKnown RBP30.26■■■□□ 2.44
CNN3-202ENST00000394202 CHL1O00533 1208 aa30.25■■■□□ 2.43
CNN3-202ENST00000394202 EXOSC9Q06265 439 aaKnown RBP30.24■■■□□ 2.43
CNN3-202ENST00000394202 DDX54Q8TDD1 881 aaKnown RBP30.24■■■□□ 2.43
CNN3-202ENST00000394202 RCAN3Q9UKA8 241 aa30.24■■■□□ 2.43
CNN3-202ENST00000394202 LRRC37A3O60309 1634 aa30.24■■■□□ 2.43
CNN3-202ENST00000394202 THRAP3Q9Y2W1 955 aaKnown RBP30.24■■■□□ 2.43
CNN3-202ENST00000394202 KDM6AO15550 1401 aaPredicted RBP30.23■■■□□ 2.43
CNN3-202ENST00000394202 PCDH11XQ9BZA7 1347 aa30.23■■■□□ 2.43
CNN3-202ENST00000394202 PCDH11YQ9BZA8 1340 aa30.23■■■□□ 2.43
CNN3-202ENST00000394202 SHANK3Q9BYB0 1731 aa30.21■■■□□ 2.43
CNN3-202ENST00000394202 TAF7Q15545 349 aaPredicted RBP30.2■■■□□ 2.43
CNN3-202ENST00000394202 BARGINQ6ZT62 677 aa30.19■■■□□ 2.42
CNN3-202ENST00000394202 FAM98CQ17RN3 349 aaKnown RBP30.19■■■□□ 2.42
CNN3-202ENST00000394202 DCAF5Q96JK2 942 aa30.18■■■□□ 2.42
CNN3-202ENST00000394202 ADAMTS7Q9UKP4 1686 aa30.18■■■□□ 2.42
CNN3-202ENST00000394202 TSPYL4Q9UJ04 414 aa30.17■■■□□ 2.42
CNN3-202ENST00000394202 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.17■■■□□ 2.42
CNN3-202ENST00000394202 WNK3Q9BYP7 1800 aa30.17■■■□□ 2.42
CNN3-202ENST00000394202 EXOC5O00471 708 aa30.17■■■□□ 2.42
CNN3-202ENST00000394202 TEFQ10587 303 aa30.17■■■□□ 2.42
CNN3-202ENST00000394202 KRT24Q2M2I5 525 aa30.17■■■□□ 2.42
CNN3-202ENST00000394202 TSPYL6Q8N831 410 aa30.17■■■□□ 2.42
CNN3-202ENST00000394202 VIRMAQ69YN4 1812 aaKnown RBP30.16■■■□□ 2.42
CNN3-202ENST00000394202 C8orf58Q8NAV2 365 aa30.15■■■□□ 2.42
CNN3-202ENST00000394202 CDCA7Q9BWT1 371 aaPredicted RBP30.15■■■□□ 2.42
CNN3-202ENST00000394202 NKX1-1Q15270 411 aaPredicted RBP30.15■■■□□ 2.42
CNN3-202ENST00000394202 ELL2O00472 640 aaPredicted RBP30.14■■■□□ 2.42
CNN3-202ENST00000394202 HSP90AB1P08238 724 aaKnown RBP30.14■■■□□ 2.42
CNN3-202ENST00000394202 NFATC2IPQ8NCF5 419 aa30.13■■■□□ 2.41
CNN3-202ENST00000394202 SCN11AQ9UI33 1791 aa30.13■■■□□ 2.41
CNN3-202ENST00000394202 DDB1Q16531 1140 aa30.12■■■□□ 2.41
CNN3-202ENST00000394202 GJD4Q96KN9 370 aaPredicted RBP30.12■■■□□ 2.41
CNN3-202ENST00000394202 SLC52A2Q9HAB3 445 aa30.12■■■□□ 2.41
CNN3-202ENST00000394202 TNS2Q63HR2 1409 aa30.12■■■□□ 2.41
CNN3-202ENST00000394202 KCNQ3O43525 872 aa30.12■■■□□ 2.41
CNN3-202ENST00000394202 ATRNO75882 1429 aa30.11■■■□□ 2.41
CNN3-202ENST00000394202 BTBD11A6QL63 1104 aa30.1■■■□□ 2.41
CNN3-202ENST00000394202 BCAR3O75815 825 aa30.1■■■□□ 2.41
CNN3-202ENST00000394202 TRPC5Q9UL62 973 aaPredicted RBP30.1■■■□□ 2.41
CNN3-202ENST00000394202 RNF123Q5XPI4 1314 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms