RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 UBAC1Q9BSL1 405 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 EXOSC9Q06265 439 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 CFAP100Q494V2 611 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 PLEKHO1Q53GL0 409 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 ESCO1Q5FWF5 840 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 COMMD10Q9Y6G5 202 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 SF3B2Q13435 895 aaKnown RBP6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 PDCL2Q8N4E4 241 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 TRERF1Q96PN7 1200 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 DDX23Q9BUQ8 820 aaKnown RBP6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 GSTTP1A0A1W2PQM5 241 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 POLR3GO15318 223 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 SLC4A2P04920 1241 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 LIG1P18858 919 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 TWISTNBQ3B726 338 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 BICDL1Q6ZP65 573 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 PPM1EQ8WY54 764 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 TMCO5BA8MYB1 307 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 BCAR3O75815 825 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 CDKL5O76039 1030 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 ZSCAN25Q6NSZ9 544 aa6.65□□□□□ -1.35
GAPVD1-206ENST00000394104 SMC1AQ14683 1233 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 GRIPAP1Q4V328 841 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 KLHL10Q6JEL2 608 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 LARP1Q6PKG0 1096 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 GAS2L2Q8NHY3 880 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 GCC1Q96CN9 775 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 ADAMTS8Q9UP79 889 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 CETN2P41208 172 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 CDCA7LQ96GN5 454 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 ZFP91Q96JP5 570 aaPredicted RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 DHX57Q6P158 1386 aaKnown RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 MACROD2A1Z1Q3 448 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 GCOM1H8Y6P7 765 aaPredicted RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 MYZAPP0CAP1 466 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 MTHFSP49914 203 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 UBXN4Q92575 508 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 TSG101Q99816 390 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 TMEM132EQ6IEE7 984 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 CACNA2D4Q7Z3S7 1137 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC85AQ96PX6 553 aaPredicted RBP6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 CEP131Q9UPN4 1083 aa6.64□□□□□ -1.35
GAPVD1-206ENST00000394104 BLOC1S2Q6QNY1 142 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 LUZP1Q86V48 1076 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 FERMT2Q96AC1 680 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 PRKAR2BP31323 418 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 DNAI2Q9GZS0 605 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 LRP2BPQ9P2M1 347 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 SYCE3A1L190 88 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 PPP1R12BO60237 982 aaPredicted RBP6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 CASTP20810 708 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 KIF5CO60282 957 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 TATP17735 454 aaPredicted RBP6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 TNIP1Q15025 636 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 PPP4R3AQ6IN85 833 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 SEC63Q9UGP8 760 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 FKBP15Q5T1M5 1219 aa6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 IPO4Q8TEX9 1081 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-206ENST00000394104 MAP9Q49MG5 647 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC150Q8NCX0 1101 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 GPRASP1Q5JY77 1395 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 CTNNA2P26232 953 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 AAMPQ13685 434 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 WDR70Q9NW82 654 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 URI1O94763 535 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 WASF1Q92558 559 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 PTPN14Q15678 1187 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 MAP3K11Q16584 847 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 HOOK3Q86VS8 718 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 TMEM87AQ8NBN3 555 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 CPLX3Q8WVH0 158 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 IDH1O75874 414 aaKnown RBP6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 IMMTQ16891 758 aaKnown RBP6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 KIF4BQ2VIQ3 1234 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 NUP88Q99567 741 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 GBP3Q9H0R5 595 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC88BA6NC98 1476 aa6.62□□□□□ -1.35
GAPVD1-206ENST00000394104 CCT4P50991 539 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 GUCY1B3Q02153 619 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 TOM1L2Q6ZVM7 507 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 PLCD3Q8N3E9 789 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 TCP11L2Q8N4U5 519 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 ANKRD18BA2A2Z9 1011 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 NUTM1Q86Y26 1132 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 TRMT1Q9NXH9 659 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 POLR3DP05423 398 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 MINDY4BA8MYZ0 360 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 MICALCLQ6ZW33 695 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 CHD1LQ86WJ1 897 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC83Q8IWF9 413 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 DRC1Q96MC2 740 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 LMAN1P49257 510 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 IL1RAPL2Q9NP60 686 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms