RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 FIBPO43427 364 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 HS1BP3Q53T59 392 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 MAP4K4O95819 1239 aaPredicted RBP14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 TET3O43151 1660 aa14.29□□□□□ -0.12
R3HDM2-203ENST00000393811 GOLGA6L4A6NEF3 574 aa14.28□□□□□ -0.12
R3HDM2-203ENST00000393811 MTERF4Q7Z6M4 381 aaKnown RBP14.28□□□□□ -0.12
R3HDM2-203ENST00000393811 ZFYVE16Q7Z3T8 1539 aa14.28□□□□□ -0.12
R3HDM2-203ENST00000393811 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
R3HDM2-203ENST00000393811 SLC52A1Q9NWF4 448 aa14.28□□□□□ -0.12
R3HDM2-203ENST00000393811 KIF1BO60333 1816 aa14.28□□□□□ -0.12
R3HDM2-203ENST00000393811 ABCC4O15439 1325 aa14.27□□□□□ -0.12
R3HDM2-203ENST00000393811 PLEKHG5O94827 1062 aa14.27□□□□□ -0.12
R3HDM2-203ENST00000393811 IL1RAPL2Q9NP60 686 aa14.27□□□□□ -0.12
R3HDM2-203ENST00000393811 GNAI2P04899 355 aa14.27□□□□□ -0.13
R3HDM2-203ENST00000393811 CYB5RLQ6IPT4 315 aa14.27□□□□□ -0.13
R3HDM2-203ENST00000393811 LRRCC1Q9C099 1032 aa14.27□□□□□ -0.13
R3HDM2-203ENST00000393811 NPATQ14207 1427 aa14.27□□□□□ -0.13
R3HDM2-203ENST00000393811 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
R3HDM2-203ENST00000393811 PDE1AP54750 535 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 SHROOM2Q13796 1616 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 AEBP1Q8IUX7 1158 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 SPC24Q8NBT2 197 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 MCM5P33992 734 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
R3HDM2-203ENST00000393811 WDR33Q9C0J8 1336 aaKnown RBP14.25□□□□□ -0.13
R3HDM2-203ENST00000393811 VPS37CA5D8V6 355 aaPredicted RBP14.25□□□□□ -0.13
R3HDM2-203ENST00000393811 C14orf37Q86TY3 774 aa14.25□□□□□ -0.13
R3HDM2-203ENST00000393811 BCL11BQ9C0K0 894 aaPredicted RBP14.25□□□□□ -0.13
R3HDM2-203ENST00000393811 MX1P20591 662 aa14.25□□□□□ -0.13
R3HDM2-203ENST00000393811 FBXO31Q5XUX0 539 aaPredicted RBP14.25□□□□□ -0.13
R3HDM2-203ENST00000393811 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
R3HDM2-203ENST00000393811 TTC12Q9H892 705 aaPredicted RBP14.24□□□□□ -0.13
R3HDM2-203ENST00000393811 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■□□□ 12.5
R3HDM2-203ENST00000393811 AK9Q5TCS8 1911 aa14.24□□□□□ -0.13
R3HDM2-203ENST00000393811 ZNF500O60304 480 aaPredicted RBP14.24□□□□□ -0.13
R3HDM2-203ENST00000393811 HCLS1P14317 486 aaPredicted RBP14.24□□□□□ -0.13
R3HDM2-203ENST00000393811 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 TSC1Q92574 1164 aa14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 ATP6V1DQ9Y5K8 247 aa14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 SURF6O75683 361 aaKnown RBP14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
R3HDM2-203ENST00000393811 MSH6P52701 1360 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 ADCY5O95622 1261 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 BRPF1P55201 1214 aaPredicted RBP14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 HMGN5P82970 282 aaKnown RBP14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 LTV1Q96GA3 475 aaPredicted RBP14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 ESYT1Q9BSJ8 1104 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 GOLGA6L6A8MZA4 724 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 DTNBO60941 627 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 IL13P35225 146 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 C17orf53Q8N3J3 647 aaPredicted RBP14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 GADD45BO75293 160 aaPredicted RBP14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 GNAI3P08754 354 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 CBX1P83916 185 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 CLEC17AQ6ZS10 378 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
R3HDM2-203ENST00000393811 QRICH2Q9H0J4 1663 aa14.21□□□□□ -0.13
R3HDM2-203ENST00000393811 AMPHP49418 695 aa14.21□□□□□ -0.13
R3HDM2-203ENST00000393811 TERF1P54274 439 aa14.21□□□□□ -0.13
R3HDM2-203ENST00000393811 ZDHHC9Q9Y397 364 aa14.21□□□□□ -0.13
R3HDM2-203ENST00000393811 SHPRHQ149N8 1683 aa14.21□□□□□ -0.14
R3HDM2-203ENST00000393811 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.14
R3HDM2-203ENST00000393811 NUDT16Q96DE0 195 aaKnown RBP14.21□□□□□ -0.14
R3HDM2-203ENST00000393811 EIF2S2P20042 333 aaKnown RBP14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 FAM184AQ8NB25 1140 aa14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 DIAPH3Q9NSV4 1193 aa14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 PALD1Q9ULE6 856 aa14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 CNPY2Q9Y2B0 182 aa14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 ZCCHC11Q5TAX3 1644 aaKnown RBP14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 G2E3Q7L622 706 aa14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
R3HDM2-203ENST00000393811 ZFYVE9O95405 1425 aa14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 PTPRCP08575 1304 aa14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 NOLC1Q14978 699 aaKnown RBP eCLIP14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 CCDC183Q5T5S1 534 aa14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 KIF3AQ9Y496 699 aa14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 KIAA1210Q9ULL0 1709 aa14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 EFCAB6Q5THR3 1501 aa14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
R3HDM2-203ENST00000393811 BRD1O95696 1058 aa14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 CYP2E1P05181 493 aaPredicted RBP14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 GIMAP6Q6P9H5 292 aa14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 PDLIM2Q96JY6 352 aa14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 LRRFIP2Q9Y608 721 aaKnown RBP14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 CCDC61Q9Y6R9 512 aa14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 PTCH1Q13635 1447 aa14.18□□□□□ -0.14
R3HDM2-203ENST00000393811 ZNF853P0CG23 659 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms