RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 IRAK4Q9NWZ3 460 aa13.72□□□□□ -0.21
LAMB1-203ENST00000393560 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
LAMB1-203ENST00000393560 KDM4AO75164 1064 aa13.72□□□□□ -0.21
LAMB1-203ENST00000393560 SWT1Q5T5J6 900 aaKnown RBP13.72□□□□□ -0.21
LAMB1-203ENST00000393560 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
LAMB1-203ENST00000393560 ABCC1P33527 1531 aa13.71□□□□□ -0.21
LAMB1-203ENST00000393560 KIF3CO14782 793 aa13.71□□□□□ -0.21
LAMB1-203ENST00000393560 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
LAMB1-203ENST00000393560 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
LAMB1-203ENST00000393560 PACS2Q86VP3 889 aa13.71□□□□□ -0.21
LAMB1-203ENST00000393560 CREBRFQ8IUR6 639 aa13.71□□□□□ -0.21
LAMB1-203ENST00000393560 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
LAMB1-203ENST00000393560 TPM3P06753 285 aa13.71□□□□□ -0.22
LAMB1-203ENST00000393560 LIG1P18858 919 aa13.71□□□□□ -0.22
LAMB1-203ENST00000393560 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.22
LAMB1-203ENST00000393560 RAD50Q92878 1312 aa13.71□□□□□ -0.22
LAMB1-203ENST00000393560 NUCKS1Q9H1E3 243 aaKnown RBP13.7□□□□□ -0.22
LAMB1-203ENST00000393560 USP47Q96K76 1375 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
LAMB1-203ENST00000393560 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.7□□□□□ -0.22
LAMB1-203ENST00000393560 KNSTRNQ9Y448 316 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
LAMB1-203ENST00000393560 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-203ENST00000393560 PAX7P23759 505 aa13.69□□□□□ -0.22
LAMB1-203ENST00000393560 CCDC97Q96F63 343 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-203ENST00000393560 FAM210AQ96ND0 272 aa13.69□□□□□ -0.22
LAMB1-203ENST00000393560 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
LAMB1-203ENST00000393560 ZNF445P59923 1031 aa13.69□□□□□ -0.22
LAMB1-203ENST00000393560 SF3A1Q15459 793 aaKnown RBP13.69□□□□□ -0.22
LAMB1-203ENST00000393560 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
LAMB1-203ENST00000393560 CTAGE5O15320 804 aa13.68□□□□□ -0.22
LAMB1-203ENST00000393560 NAA30Q147X3 362 aaPredicted RBP13.68□□□□□ -0.22
LAMB1-203ENST00000393560 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
LAMB1-203ENST00000393560 MAST1Q9Y2H9 1570 aa13.68□□□□□ -0.22
LAMB1-203ENST00000393560 SCP2P22307 547 aa13.68□□□□□ -0.22
LAMB1-203ENST00000393560 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
LAMB1-203ENST00000393560 GOLGA6L22H0YM25 854 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
LAMB1-203ENST00000393560 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 KIF3BO15066 747 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 COQ9O75208 318 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
LAMB1-203ENST00000393560 NAIF1Q69YI7 327 aaPredicted RBP13.67□□□□□ -0.22
LAMB1-203ENST00000393560 DUOX2Q9NRD8 1548 aa13.66□□□□□ -0.22
LAMB1-203ENST00000393560 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
LAMB1-203ENST00000393560 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
LAMB1-203ENST00000393560 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
LAMB1-203ENST00000393560 TRDNQ13061 729 aa13.65□□□□□ -0.22
LAMB1-203ENST00000393560 ZSCAN26Q16670 478 aa13.65□□□□□ -0.22
LAMB1-203ENST00000393560 MCTP2Q6DN12 878 aa13.65□□□□□ -0.22
LAMB1-203ENST00000393560 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
LAMB1-203ENST00000393560 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
LAMB1-203ENST00000393560 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
LAMB1-203ENST00000393560 SRLQ86TD4 932 aa13.64□□□□□ -0.23
LAMB1-203ENST00000393560 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
LAMB1-203ENST00000393560 RRP15Q9Y3B9 282 aaKnown RBP13.64□□□□□ -0.23
LAMB1-203ENST00000393560 PLA2R1Q13018 1463 aa13.64□□□□□ -0.23
LAMB1-203ENST00000393560 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
LAMB1-203ENST00000393560 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
LAMB1-203ENST00000393560 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 TBC1D22AQ8WUA7 517 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 ARHGEF1Q92888 912 aaKnown RBP13.63□□□□□ -0.23
LAMB1-203ENST00000393560 SPTLC3Q9NUV7 552 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 TXLNBQ8N3L3 684 aa13.63□□□□□ -0.23
LAMB1-203ENST00000393560 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
LAMB1-203ENST00000393560 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
LAMB1-203ENST00000393560 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
LAMB1-203ENST00000393560 LRRFIP2Q9Y608 721 aaKnown RBP13.62□□□□□ -0.23
LAMB1-203ENST00000393560 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
LAMB1-203ENST00000393560 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
LAMB1-203ENST00000393560 ZFYVE16Q7Z3T8 1539 aa13.61□□□□□ -0.23
LAMB1-203ENST00000393560 ECEL1O95672 775 aa13.61□□□□□ -0.23
LAMB1-203ENST00000393560 UNC13BO14795 1591 aa13.61□□□□□ -0.23
LAMB1-203ENST00000393560 NEBLO76041 1014 aa13.61□□□□□ -0.23
LAMB1-203ENST00000393560 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
LAMB1-203ENST00000393560 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
LAMB1-203ENST00000393560 CWC15Q9P013 229 aaKnown RBP13.61□□□□□ -0.23
LAMB1-203ENST00000393560 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
LAMB1-203ENST00000393560 MFSD4BQ5TF39 518 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 PROCA1Q8NCQ7 364 aaPredicted RBP13.6□□□□□ -0.23
LAMB1-203ENST00000393560 FAM53CQ9NYF3 392 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 ARAP3Q8WWN8 1544 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 KMT5BQ4FZB7 885 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 JAKMIP3Q5VZ66 844 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 GTF3C6Q969F1 213 aa13.6□□□□□ -0.23
LAMB1-203ENST00000393560 THOC1Q96FV9 657 aaKnown RBP13.6□□□□□ -0.23
LAMB1-203ENST00000393560 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
LAMB1-203ENST00000393560 DDIT3P35638 169 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms