RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 BCL9O00512 1426 aa25.57■■□□□ 1.68
PDLIM7-204ENST00000393546 RALBP1Q15311 655 aa25.57■■□□□ 1.68
PDLIM7-204ENST00000393546 BAG6P46379 1132 aa25.56■■□□□ 1.68
PDLIM7-204ENST00000393546 SULT6B1Q6IMI4 303 aa25.56■■□□□ 1.68
PDLIM7-204ENST00000393546 SPG7Q9UQ90 795 aa25.56■■□□□ 1.68
PDLIM7-204ENST00000393546 RGPD1P0DJD0 1748 aa25.56■■□□□ 1.68
PDLIM7-204ENST00000393546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.55■■□□□ 1.68
PDLIM7-204ENST00000393546 APBA3O96018 575 aa25.54■■□□□ 1.68
PDLIM7-204ENST00000393546 DEFB132Q7Z7B7 95 aa25.54■■□□□ 1.68
PDLIM7-204ENST00000393546 BCL11BQ9C0K0 894 aaPredicted RBP25.53■■□□□ 1.68
PDLIM7-204ENST00000393546 PCDH11XQ9BZA7 1347 aa25.53■■□□□ 1.68
PDLIM7-204ENST00000393546 PCDH11YQ9BZA8 1340 aa25.53■■□□□ 1.68
PDLIM7-204ENST00000393546 AEBP1Q8IUX7 1158 aa25.52■■□□□ 1.68
PDLIM7-204ENST00000393546 KAT6BQ8WYB5 2073 aa25.52■■□□□ 1.68
PDLIM7-204ENST00000393546 SBF2Q86WG5 1849 aa25.51■■□□□ 1.67
PDLIM7-204ENST00000393546 U2SURPO15042 1029 aaKnown RBP25.51■■□□□ 1.67
PDLIM7-204ENST00000393546 ACSBG1Q96GR2 724 aa25.51■■□□□ 1.67
PDLIM7-204ENST00000393546 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
PDLIM7-204ENST00000393546 COL3A1P02461 1466 aaPredicted RBP25.5■■□□□ 1.67
PDLIM7-204ENST00000393546 PLEKHO1Q53GL0 409 aaPredicted RBP25.5■■□□□ 1.67
PDLIM7-204ENST00000393546 PLEKHG2Q9H7P9 1386 aa25.5■■□□□ 1.67
PDLIM7-204ENST00000393546 KDRP35968 1356 aa25.49■■□□□ 1.67
PDLIM7-204ENST00000393546 CYP27B1O15528 508 aa25.49■■□□□ 1.67
PDLIM7-204ENST00000393546 EN1Q05925 392 aaPredicted RBP25.49■■□□□ 1.67
PDLIM7-204ENST00000393546 KCNQ2O43526 872 aa25.48■■□□□ 1.67
PDLIM7-204ENST00000393546 HMOX1P09601 288 aa25.48■■□□□ 1.67
PDLIM7-204ENST00000393546 AMOTQ4VCS5 1084 aa25.48■■□□□ 1.67
PDLIM7-204ENST00000393546 SHANK3Q9BYB0 1731 aa25.48■■□□□ 1.67
PDLIM7-204ENST00000393546 TNS1Q9HBL0 1735 aaKnown RBP25.47■■□□□ 1.67
PDLIM7-204ENST00000393546 PTF1AQ7RTS3 328 aa25.47■■□□□ 1.67
PDLIM7-204ENST00000393546 PKD1L3Q7Z443 1732 aa25.46■■□□□ 1.67
PDLIM7-204ENST00000393546 IFNL2Q8IZJ0 200 aa25.46■■□□□ 1.67
PDLIM7-204ENST00000393546 MYBBP1AQ9BQG0 1328 aaKnown RBP25.44■■□□□ 1.66
PDLIM7-204ENST00000393546 PLSCR1O15162 318 aa25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 PHKG2P15735 406 aa25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 PRIM1P49642 420 aaKnown RBP25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 NKX1-1Q15270 411 aaPredicted RBP25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 EZH2Q15910 746 aaKnown RBP25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 SYTL4Q96C24 671 aaPredicted RBP25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 CAMKK2Q96RR4 588 aa25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 PRKRIP1Q9H875 184 aaPredicted RBP25.43■■□□□ 1.66
PDLIM7-204ENST00000393546 ZNF530Q6P9A1 599 aaPredicted RBP25.42■■□□□ 1.66
PDLIM7-204ENST00000393546 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
PDLIM7-204ENST00000393546 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.664e-6■■□□□ 12.1
PDLIM7-204ENST00000393546 NHSQ6T4R5 1651 aa25.41■■□□□ 1.66
PDLIM7-204ENST00000393546 HSP90AB1P08238 724 aaKnown RBP25.39■■□□□ 1.66
PDLIM7-204ENST00000393546 C1orf141Q5JVX7 400 aa25.39■■□□□ 1.66
PDLIM7-204ENST00000393546 DOT1LQ8TEK3 1739 aa25.36■■□□□ 1.65
PDLIM7-204ENST00000393546 FCHSD2O94868 740 aa25.35■■□□□ 1.65
PDLIM7-204ENST00000393546 DCAF5Q96JK2 942 aa25.35■■□□□ 1.65
PDLIM7-204ENST00000393546 MPRIPQ6WCQ1 1025 aa25.34■■□□□ 1.65
PDLIM7-204ENST00000393546 RSPH6AQ9H0K4 717 aa25.34■■□□□ 1.65
PDLIM7-204ENST00000393546 BTAF1O14981 1849 aa25.34■■□□□ 1.65
PDLIM7-204ENST00000393546 PRKAR2BP31323 418 aa25.33■■□□□ 1.65
PDLIM7-204ENST00000393546 MTHFSDQ2M296 383 aaKnown RBP25.33■■□□□ 1.65
PDLIM7-204ENST00000393546 AKAP4Q5JQC9 854 aa25.33■■□□□ 1.65
PDLIM7-204ENST00000393546 ERVV-2B6SEH9 535 aa25.31■■□□□ 1.64
PDLIM7-204ENST00000393546 ANP32CO43423 234 aa25.31■■□□□ 1.64
PDLIM7-204ENST00000393546 TXNRD1Q16881 649 aa25.3■■□□□ 1.64
PDLIM7-204ENST00000393546 PROM2Q8N271 834 aa25.3■■□□□ 1.64
PDLIM7-204ENST00000393546 GAS2L2Q8NHY3 880 aa25.3■■□□□ 1.64
PDLIM7-204ENST00000393546 TMOD3Q9NYL9 352 aa25.3■■□□□ 1.64
PDLIM7-204ENST00000393546 RGPD3A6NKT7 1758 aaPredicted RBP25.3■■□□□ 1.64
PDLIM7-204ENST00000393546 RGPD4Q7Z3J3 1758 aa25.3■■□□□ 1.64
PDLIM7-204ENST00000393546 PIGBQ92521 554 aa25.29■■□□□ 1.64
PDLIM7-204ENST00000393546 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-204ENST00000393546 NEFMP07197 916 aa25.28■■□□□ 1.64
PDLIM7-204ENST00000393546 NBPF14Q5TI25 921 aa25.28■■□□□ 1.64
PDLIM7-204ENST00000393546 PHACTR3Q96KR7 559 aa25.28■■□□□ 1.64
PDLIM7-204ENST00000393546 ITGB4P16144 1822 aa25.28■■□□□ 1.64
PDLIM7-204ENST00000393546 TOGARAM1Q9Y4F4 1720 aa25.27■■□□□ 1.64
PDLIM7-204ENST00000393546 CABP4P57796 275 aa25.27■■□□□ 1.64
PDLIM7-204ENST00000393546 SMARCC1Q92922 1105 aaPredicted RBP25.26■■□□□ 1.63
PDLIM7-204ENST00000393546 RREB1Q92766 1687 aa25.26■■□□□ 1.63
PDLIM7-204ENST00000393546 KDM6AO15550 1401 aaPredicted RBP25.24■■□□□ 1.63
PDLIM7-204ENST00000393546 SLC27A3Q5K4L6 730 aa25.24■■□□□ 1.63
PDLIM7-204ENST00000393546 GNAT3A8MTJ3 354 aa25.23■■□□□ 1.63
PDLIM7-204ENST00000393546 RNMTO43148 476 aaKnown RBP25.23■■□□□ 1.63
PDLIM7-204ENST00000393546 WDR43Q15061 677 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM7-204ENST00000393546 LGR6Q9HBX8 967 aa25.23■■□□□ 1.63
PDLIM7-204ENST00000393546 NUP188Q5SRE5 1749 aa25.21■■□□□ 1.63
PDLIM7-204ENST00000393546 NFATC2IPQ8NCF5 419 aa25.21■■□□□ 1.63
PDLIM7-204ENST00000393546 MAP3K5Q99683 1374 aa25.2■■□□□ 1.63
PDLIM7-204ENST00000393546 PLEKHF1Q96S99 279 aa25.2■■□□□ 1.62
PDLIM7-204ENST00000393546 ASAP1Q9ULH1 1129 aa25.2■■□□□ 1.62
PDLIM7-204ENST00000393546 PALLDQ8WX93 1383 aa25.19■■□□□ 1.62
PDLIM7-204ENST00000393546 SCN11AQ9UI33 1791 aa25.19■■□□□ 1.62
PDLIM7-204ENST00000393546 R3HDM1Q15032 1099 aaKnown RBP25.19■■□□□ 1.62
PDLIM7-204ENST00000393546 LRRC4BQ9NT99 713 aa25.19■■□□□ 1.62
PDLIM7-204ENST00000393546 CCNL1Q9UK58 526 aaPredicted RBP25.19■■□□□ 1.62
PDLIM7-204ENST00000393546 MAPK8IP3Q9UPT6 1336 aa25.18■■□□□ 1.62
PDLIM7-204ENST00000393546 HMGB2P26583 209 aaKnown RBP25.18■■□□□ 1.62
PDLIM7-204ENST00000393546 SLC52A2Q9HAB3 445 aa25.18■■□□□ 1.62
PDLIM7-204ENST00000393546 ATG3Q9NT62 314 aa25.18■■□□□ 1.62
PDLIM7-204ENST00000393546 PSDA5PKW4 1024 aaPredicted RBP25.17■■□□□ 1.62
PDLIM7-204ENST00000393546 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
PDLIM7-204ENST00000393546 STK32BQ9NY57 414 aa25.17■■□□□ 1.62
PDLIM7-204ENST00000393546 LY75O60449 1722 aa25.16■■□□□ 1.62
PDLIM7-204ENST00000393546 KCNQ4P56696 695 aa25.16■■□□□ 1.62
PDLIM7-204ENST00000393546 IL17REQ8NFR9 667 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms