RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 C8orf58Q8NAV2 365 aa25.95■■□□□ 1.74
ME3-202ENST00000393324 CHL1O00533 1208 aa25.94■■□□□ 1.74
ME3-202ENST00000393324 IPO8O15397 1037 aaKnown RBP25.94■■□□□ 1.74
ME3-202ENST00000393324 DDX17Q92841 729 aaKnown RBP25.94■■□□□ 1.74
ME3-202ENST00000393324 ALS2Q96Q42 1657 aa25.94■■□□□ 1.74
ME3-202ENST00000393324 BRPF1P55201 1214 aaPredicted RBP25.94■■□□□ 1.74
ME3-202ENST00000393324 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
ME3-202ENST00000393324 TCERG1O14776 1098 aaKnown RBP25.93■■□□□ 1.74
ME3-202ENST00000393324 CRB1P82279 1406 aa25.92■■□□□ 1.74
ME3-202ENST00000393324 NBPF6Q5VWK0 638 aa25.92■■□□□ 1.74
ME3-202ENST00000393324 NBPF4Q96M43 638 aa25.92■■□□□ 1.74
ME3-202ENST00000393324 NPHP3Q7Z494 1330 aa25.91■■□□□ 1.74
ME3-202ENST00000393324 HTATSF1O43719 755 aaKnown RBP25.9■■□□□ 1.74
ME3-202ENST00000393324 MRPL50Q8N5N7 158 aaKnown RBP25.9■■□□□ 1.74
ME3-202ENST00000393324 IGHDP01880 384 aa25.89■■□□□ 1.74
ME3-202ENST00000393324 SKAP1Q86WV1 359 aa25.89■■□□□ 1.74
ME3-202ENST00000393324 ZNF335Q9H4Z2 1342 aaPredicted RBP25.89■■□□□ 1.73
ME3-202ENST00000393324 RGPD2P0DJD1 1756 aa25.89■■□□□ 1.73
ME3-202ENST00000393324 GNAT3A8MTJ3 354 aa25.88■■□□□ 1.73
ME3-202ENST00000393324 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
ME3-202ENST00000393324 ITPRIPQ8IWB1 547 aa25.86■■□□□ 1.73
ME3-202ENST00000393324 LRRC59Q96AG4 307 aaKnown RBP25.86■■□□□ 1.73
ME3-202ENST00000393324 DDX19BQ9UMR2 479 aa25.86■■□□□ 1.73
ME3-202ENST00000393324 PCDHB15Q9Y5E8 787 aa25.86■■□□□ 1.73
ME3-202ENST00000393324 KIAA0232Q92628 1395 aa25.85■■□□□ 1.73
ME3-202ENST00000393324 MSH5O43196 834 aa25.85■■□□□ 1.73
ME3-202ENST00000393324 TMEM57Q8N5G2 664 aa25.85■■□□□ 1.73
ME3-202ENST00000393324 MIS18AQ9NYP9 233 aa25.85■■□□□ 1.73
ME3-202ENST00000393324 MAP3K5Q99683 1374 aa25.85■■□□□ 1.73
ME3-202ENST00000393324 KRT24Q2M2I5 525 aa25.84■■□□□ 1.73
ME3-202ENST00000393324 HAP1P54257 671 aaPredicted RBP25.84■■□□□ 1.73
ME3-202ENST00000393324 ZC3H6P61129 1189 aaKnown RBP25.84■■□□□ 1.73
ME3-202ENST00000393324 ANKRD24Q8TF21 1146 aa25.84■■□□□ 1.73
ME3-202ENST00000393324 ARHGAP45Q92619 1136 aa25.84■■□□□ 1.73
ME3-202ENST00000393324 AXIN2Q9Y2T1 843 aa25.84■■□□□ 1.73
ME3-202ENST00000393324 TSPYL4Q9UJ04 414 aa25.83■■□□□ 1.73
ME3-202ENST00000393324 TNS3Q68CZ2 1445 aa25.82■■□□□ 1.72
ME3-202ENST00000393324 PXDNQ92626 1479 aa25.82■■□□□ 1.72
ME3-202ENST00000393324 LRRC37A3O60309 1634 aa25.81■■□□□ 1.72
ME3-202ENST00000393324 BRINP3Q76B58 766 aa25.81■■□□□ 1.72
ME3-202ENST00000393324 RGPD5Q99666 1765 aa25.81■■□□□ 1.72
ME3-202ENST00000393324 IL17REQ8NFR9 667 aa25.8■■□□□ 1.72
ME3-202ENST00000393324 SPATA31A3Q5VYP0 1347 aa25.79■■□□□ 1.72
ME3-202ENST00000393324 CABLES1Q8TDN4 633 aa25.78■■□□□ 1.72
ME3-202ENST00000393324 SLAIN2Q9P270 581 aa25.78■■□□□ 1.72
ME3-202ENST00000393324 NCAPD2Q15021 1401 aa25.77■■□□□ 1.72
ME3-202ENST00000393324 RWDD1Q9H446 243 aaPredicted RBP25.76■■□□□ 1.71
ME3-202ENST00000393324 ZBTB40Q9NUA8 1239 aa25.75■■□□□ 1.71
ME3-202ENST00000393324 ERBB3P21860 1342 aa25.75■■□□□ 1.71
ME3-202ENST00000393324 PLEKHO1Q53GL0 409 aaPredicted RBP25.75■■□□□ 1.71
ME3-202ENST00000393324 PDE4AP27815 886 aa25.74■■□□□ 1.71
ME3-202ENST00000393324 TAF7Q15545 349 aaPredicted RBP25.74■■□□□ 1.71
ME3-202ENST00000393324 API5Q9BZZ5 524 aaKnown RBP25.74■■□□□ 1.71
ME3-202ENST00000393324 CAMTA1Q9Y6Y1 1673 aa25.74■■□□□ 1.71
ME3-202ENST00000393324 ABCC4O15439 1325 aa25.73■■□□□ 1.71
ME3-202ENST00000393324 RGS3P49796 1198 aa25.73■■□□□ 1.71
ME3-202ENST00000393324 AMOTQ4VCS5 1084 aa25.73■■□□□ 1.71
ME3-202ENST00000393324 ZNF530Q6P9A1 599 aaPredicted RBP25.72■■□□□ 1.71
ME3-202ENST00000393324 BABAM1Q9NWV8 329 aa25.72■■□□□ 1.71
ME3-202ENST00000393324 CEMIPQ8WUJ3 1361 aa25.71■■□□□ 1.71
ME3-202ENST00000393324 CRYBG1Q9Y4K1 1723 aa25.71■■□□□ 1.71
ME3-202ENST00000393324 AKAP4Q5JQC9 854 aa25.71■■□□□ 1.71
ME3-202ENST00000393324 BACH2Q9BYV9 841 aa25.71■■□□□ 1.71
ME3-202ENST00000393324 COL18A1P39060 1754 aa25.7■■□□□ 1.7
ME3-202ENST00000393324 LMO7Q8WWI1 1683 aa25.7■■□□□ 1.7
ME3-202ENST00000393324 CHMP4BQ9H444 224 aaKnown RBP25.69■■□□□ 1.7
ME3-202ENST00000393324 LGR6Q9HBX8 967 aa25.69■■□□□ 1.7
ME3-202ENST00000393324 ZBTB7BO15156 539 aaPredicted RBP25.68■■□□□ 1.7
ME3-202ENST00000393324 SOS2Q07890 1332 aaPredicted RBP25.68■■□□□ 1.7
ME3-202ENST00000393324 SLC4A2P04920 1241 aa25.67■■□□□ 1.7
ME3-202ENST00000393324 HDAC1Q13547 482 aaPredicted RBP25.67■■□□□ 1.7
ME3-202ENST00000393324 CHRNA2Q15822 529 aa25.67■■□□□ 1.7
ME3-202ENST00000393324 NLRP2Q9NX02 1062 aa25.67■■□□□ 1.7
ME3-202ENST00000393324 C1orf141Q5JVX7 400 aa25.66■■□□□ 1.7
ME3-202ENST00000393324 PTPRCP08575 1304 aa25.65■■□□□ 1.7
ME3-202ENST00000393324 MPRIPQ6WCQ1 1025 aa25.65■■□□□ 1.7
ME3-202ENST00000393324 CPDO75976 1380 aa25.65■■□□□ 1.7
ME3-202ENST00000393324 ABCC6O95255 1503 aa25.64■■□□□ 1.69
ME3-202ENST00000393324 CSB-PGBD3P0DP91 1061 aa25.63■■□□□ 1.69
ME3-202ENST00000393324 PDZRN3Q9UPQ7 1066 aa25.63■■□□□ 1.69
ME3-202ENST00000393324 RGS12O14924 1447 aa25.63■■□□□ 1.69
ME3-202ENST00000393324 TEFQ10587 303 aa25.63■■□□□ 1.69
ME3-202ENST00000393324 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
ME3-202ENST00000393324 SOS1Q07889 1333 aaPredicted RBP25.62■■□□□ 1.69
ME3-202ENST00000393324 RAPGEF4Q8WZA2 1011 aa25.62■■□□□ 1.69
ME3-202ENST00000393324 STK31Q9BXU1 1019 aa25.61■■□□□ 1.69
ME3-202ENST00000393324 CCDC30Q5VVM6 783 aa25.61■■□□□ 1.69
ME3-202ENST00000393324 INTS3Q68E01 1043 aaKnown RBP25.61■■□□□ 1.69
ME3-202ENST00000393324 RNMTO43148 476 aaKnown RBP25.6■■□□□ 1.69
ME3-202ENST00000393324 FAM208AQ9UK61 1670 aaKnown RBP25.6■■□□□ 1.69
ME3-202ENST00000393324 G2E3Q7L622 706 aa25.59■■□□□ 1.69
ME3-202ENST00000393324 FAM161AQ3B820 660 aa25.59■■□□□ 1.69
ME3-202ENST00000393324 CACNA1FO60840 1977 aa25.58■■□□□ 1.69
ME3-202ENST00000393324 C1orf115Q9H7X2 142 aa25.58■■□□□ 1.69
ME3-202ENST00000393324 KDM3BQ7LBC6 1761 aa25.58■■□□□ 1.69
ME3-202ENST00000393324 TATP17735 454 aaPredicted RBP25.57■■□□□ 1.68
ME3-202ENST00000393324 NECTIN2Q92692 538 aa25.57■■□□□ 1.68
ME3-202ENST00000393324 OVOS2A0A0G2JMS6 1433 aa25.57■■□□□ 1.68
ME3-202ENST00000393324 BTBD11A6QL63 1104 aa25.57■■□□□ 1.68
ME3-202ENST00000393324 SMC5Q8IY18 1101 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms