RNA–Protein interactions for RNA: ENST00000393304.5

RAB43-202, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-202ENST00000393304 MRPL50Q8N5N7 158 aaKnown RBP17.26■□□□□ 0.35
RAB43-202ENST00000393304 VAMP4O75379 141 aa17.25■□□□□ 0.35
RAB43-202ENST00000393304 TRMT2AQ8IZ69 625 aaKnown RBP17.25■□□□□ 0.35
RAB43-202ENST00000393304 PDRG1Q9NUG6 133 aa17.25■□□□□ 0.35
RAB43-202ENST00000393304 ERC1Q8IUD2 1116 aa17.25■□□□□ 0.35
RAB43-202ENST00000393304 NEUROD6Q96NK8 337 aa17.25■□□□□ 0.35
RAB43-202ENST00000393304 CEBPZQ03701 1054 aaKnown RBP17.24■□□□□ 0.35
RAB43-202ENST00000393304 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
RAB43-202ENST00000393304 KINO60870 393 aaKnown RBP17.24■□□□□ 0.35
RAB43-202ENST00000393304 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
RAB43-202ENST00000393304 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
RAB43-202ENST00000393304 ZSCAN31Q96LW9 406 aaPredicted RBP17.24■□□□□ 0.35
RAB43-202ENST00000393304 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
RAB43-202ENST00000393304 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
RAB43-202ENST00000393304 STK3Q13188 491 aa17.24■□□□□ 0.35
RAB43-202ENST00000393304 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
RAB43-202ENST00000393304 MCM5P33992 734 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 TMX3Q96JJ7 454 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 PTPRCP08575 1304 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 CCDC183Q5T5S1 534 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 BLOC1S2Q6QNY1 142 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 NAT10Q9H0A0 1025 aaKnown RBP17.23■□□□□ 0.35
RAB43-202ENST00000393304 MEIS3Q99687 375 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 KDM5CP41229 1560 aa17.23■□□□□ 0.35
RAB43-202ENST00000393304 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
RAB43-202ENST00000393304 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
RAB43-202ENST00000393304 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
RAB43-202ENST00000393304 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
RAB43-202ENST00000393304 LRSAM1Q6UWE0 723 aa17.22■□□□□ 0.35
RAB43-202ENST00000393304 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
RAB43-202ENST00000393304 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
RAB43-202ENST00000393304 ZBTB7BO15156 539 aaPredicted RBP17.21■□□□□ 0.35
RAB43-202ENST00000393304 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
RAB43-202ENST00000393304 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
RAB43-202ENST00000393304 FANCAO15360 1455 aa17.21■□□□□ 0.34
RAB43-202ENST00000393304 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 TRDNQ13061 729 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 SPATA32Q96LK8 384 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
RAB43-202ENST00000393304 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
RAB43-202ENST00000393304 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
RAB43-202ENST00000393304 APPP05067 770 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
RAB43-202ENST00000393304 AACSQ86V21 672 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 SIL1Q9H173 461 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
RAB43-202ENST00000393304 TRIM29Q14134 588 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 LIMCH1Q9UPQ0 1083 aa17.2■□□□□ 0.34
RAB43-202ENST00000393304 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
RAB43-202ENST00000393304 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 PDE1AP54750 535 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 MAP3K11Q16584 847 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 MNS1Q8NEH6 495 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
RAB43-202ENST00000393304 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 GOLGA6L1Q8N7Z2 621 aa17.19■□□□□ 0.34
RAB43-202ENST00000393304 GNAT3A8MTJ3 354 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 NPHP1O15259 732 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
RAB43-202ENST00000393304 FLIIQ13045 1269 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
RAB43-202ENST00000393304 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 PRPF40BQ6NWY9 871 aaKnown RBP17.18■□□□□ 0.34
RAB43-202ENST00000393304 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
RAB43-202ENST00000393304 CAMK4Q16566 473 aa17.17■□□□□ 0.34
RAB43-202ENST00000393304 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
RAB43-202ENST00000393304 PDIA4P13667 645 aaKnown RBP17.17■□□□□ 0.34
RAB43-202ENST00000393304 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
RAB43-202ENST00000393304 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
RAB43-202ENST00000393304 ZKSCAN5Q9Y2L8 839 aa17.17■□□□□ 0.34
RAB43-202ENST00000393304 DENND4BO75064 1496 aaPredicted RBP17.16■□□□□ 0.34
RAB43-202ENST00000393304 ADCY5O95622 1261 aa17.16■□□□□ 0.34
RAB43-202ENST00000393304 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
RAB43-202ENST00000393304 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
RAB43-202ENST00000393304 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
RAB43-202ENST00000393304 ARGLU1Q9NWB6 273 aaPredicted RBP17.16■□□□□ 0.34
RAB43-202ENST00000393304 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
RAB43-202ENST00000393304 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
RAB43-202ENST00000393304 TULP1O00294 542 aaPredicted RBP17.15■□□□□ 0.34
RAB43-202ENST00000393304 STX6O43752 255 aa17.15■□□□□ 0.34
RAB43-202ENST00000393304 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
RAB43-202ENST00000393304 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
RAB43-202ENST00000393304 OFD1O75665 1012 aa17.15■□□□□ 0.34
RAB43-202ENST00000393304 SMC2O95347 1197 aa17.15■□□□□ 0.34
RAB43-202ENST00000393304 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
RAB43-202ENST00000393304 ME1P48163 572 aa17.15■□□□□ 0.34
RAB43-202ENST00000393304 ZNF396Q96N95 335 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms