RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 TRDNQ13061 729 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 CCDC158Q5M9N0 1113 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 ERICH2A1L162 156 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 CNTROBQ8N137 903 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 EXOSC9Q06265 439 aaKnown RBP9.88□□□□□ -0.83
ATXN3-203ENST00000393287 POLKQ9UBT6 870 aa9.88□□□□□ -0.83
ATXN3-203ENST00000393287 LARP1Q6PKG0 1096 aaKnown RBP9.88□□□□□ -0.83
ATXN3-203ENST00000393287 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
ATXN3-203ENST00000393287 COG6Q9Y2V7 657 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 NCOA3Q9Y6Q9 1424 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 KIDINS220Q9ULH0 1771 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-203ENST00000393287 HOXC9P31274 260 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 CLASRPQ8N2M8 674 aaKnown RBP9.87□□□□□ -0.83
ATXN3-203ENST00000393287 NECTIN2Q92692 538 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 PTPRCP08575 1304 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 TOMM22Q9NS69 142 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 ATP6V1DQ9Y5K8 247 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 TPM4P67936 248 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
ATXN3-203ENST00000393287 SBNO1A3KN83 1393 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 SLC4A2P04920 1241 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
ATXN3-203ENST00000393287 PCDH11XQ9BZA7 1347 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 PCDH11YQ9BZA8 1340 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 MPRIPQ6WCQ1 1025 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 DDX17Q92841 729 aaKnown RBP9.86□□□□□ -0.83
ATXN3-203ENST00000393287 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 IGHMBP2P38935 993 aaKnown RBP9.86□□□□□ -0.83
ATXN3-203ENST00000393287 AKAP4Q5JQC9 854 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 CNNM1Q9NRU3 951 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 BCL2L13Q9BXK5 485 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-203ENST00000393287 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
ATXN3-203ENST00000393287 PTCH1Q13635 1447 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 TTC39AQ5SRH9 613 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 SPATA31D1Q6ZQQ2 1576 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 AKAP2Q9Y2D5 859 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 PSMA5P28066 241 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 EIF4A2Q14240 407 aaKnown RBP9.85□□□□□ -0.83
ATXN3-203ENST00000393287 NBPF14Q5TI25 921 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 JCADQ9P266 1359 aa9.85□□□□□ -0.83
ATXN3-203ENST00000393287 RPAP2Q8IXW5 612 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 AK7Q96M32 723 aa9.84□□□□□ -0.83
ATXN3-203ENST00000393287 NOP58Q9Y2X3 529 aaKnown RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 RAB11FIP3O75154 756 aa9.84□□□□□ -0.83
ATXN3-203ENST00000393287 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
ATXN3-203ENST00000393287 PRR36Q9H6K5 1346 aa9.84□□□□□ -0.83
ATXN3-203ENST00000393287 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 TRIM44Q96DX7 344 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 DBF4Q9UBU7 674 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-203ENST00000393287 CAMSAP1Q5T5Y3 1602 aa9.84□□□□□ -0.83
ATXN3-203ENST00000393287 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
ATXN3-203ENST00000393287 CDC45O75419 566 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 TRIM29Q14134 588 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 DCAF5Q96JK2 942 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 ADAMTS13Q76LX8 1427 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 MPHOSPH8Q99549 860 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 FRMPD1Q5SYB0 1578 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 ATP7BP35670 1465 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 NOB1Q9ULX3 412 aaKnown RBP9.83□□□□□ -0.84
ATXN3-203ENST00000393287 INSRP06213 1382 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 ATF7IPQ6VMQ6 1270 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 SLFN5Q08AF3 891 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 SART3Q15020 963 aaKnown RBP9.83□□□□□ -0.84
ATXN3-203ENST00000393287 EYA1Q99502 592 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 NEUROD6Q96NK8 337 aa9.83□□□□□ -0.84
ATXN3-203ENST00000393287 QTRT2Q9H974 415 aaKnown RBP9.83□□□□□ -0.84
ATXN3-203ENST00000393287 SNRPA1P09661 255 aaKnown RBP9.82□□□□□ -0.84
ATXN3-203ENST00000393287 PPP1R42Q7Z4L9 355 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 SPATA31A6Q5VVP1 1343 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 LAMC1P11047 1609 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 RXRBP28702 533 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 DUSP27Q5VZP5 1158 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
ATXN3-203ENST00000393287 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 MARCH6O60337 910 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 BAG6P46379 1132 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 ST5P78524 1137 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 MADDQ8WXG6 1647 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 PHF14O94880 888 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 APPP05067 770 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 PTMAP06454 111 aaKnown RBP9.81□□□□□ -0.84
ATXN3-203ENST00000393287 FBLN1P23142 703 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 FAM184AQ8NB25 1140 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 EXOC6Q8TAG9 804 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 MVPQ14764 893 aaKnown RBP9.81□□□□□ -0.84
ATXN3-203ENST00000393287 MCM10Q7L590 875 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms