RNA–Protein interactions for RNA: ENST00000392927.7

SYCP3-203, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-203ENST00000392927 MEGF6O75095 1541 aa16.84■□□□□ 0.29
SYCP3-203ENST00000392927 LRP5O75197 1615 aa16.84■□□□□ 0.29
SYCP3-203ENST00000392927 INSRP06213 1382 aa16.83■□□□□ 0.28
SYCP3-203ENST00000392927 DOT1LQ8TEK3 1739 aa16.82■□□□□ 0.28
SYCP3-203ENST00000392927 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
SYCP3-203ENST00000392927 BTAF1O14981 1849 aa16.82■□□□□ 0.28
SYCP3-203ENST00000392927 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
SYCP3-203ENST00000392927 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
SYCP3-203ENST00000392927 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
SYCP3-203ENST00000392927 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
SYCP3-203ENST00000392927 PANK3Q9H999 370 aa16.8■□□□□ 0.28
SYCP3-203ENST00000392927 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
SYCP3-203ENST00000392927 NSD2O96028 1365 aa16.78■□□□□ 0.28
SYCP3-203ENST00000392927 KAT6BQ8WYB5 2073 aa16.78■□□□□ 0.28
SYCP3-203ENST00000392927 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
SYCP3-203ENST00000392927 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
SYCP3-203ENST00000392927 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
SYCP3-203ENST00000392927 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
SYCP3-203ENST00000392927 KIF7Q2M1P5 1343 aa16.77■□□□□ 0.28
SYCP3-203ENST00000392927 PKD1L3Q7Z443 1732 aa16.77■□□□□ 0.28
SYCP3-203ENST00000392927 PLSCR1O15162 318 aa16.76■□□□□ 0.27
SYCP3-203ENST00000392927 KCNQ2O43526 872 aa16.76■□□□□ 0.27
SYCP3-203ENST00000392927 TNNT2P45379 298 aaPredicted RBP16.76■□□□□ 0.27
SYCP3-203ENST00000392927 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
SYCP3-203ENST00000392927 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
SYCP3-203ENST00000392927 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
SYCP3-203ENST00000392927 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
SYCP3-203ENST00000392927 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
SYCP3-203ENST00000392927 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
SYCP3-203ENST00000392927 POLKQ9UBT6 870 aa16.73■□□□□ 0.27
SYCP3-203ENST00000392927 WASHC2AQ641Q2 1341 aa16.72■□□□□ 0.27
SYCP3-203ENST00000392927 PAPPAQ13219 1627 aa16.72■□□□□ 0.27
SYCP3-203ENST00000392927 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
SYCP3-203ENST00000392927 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
SYCP3-203ENST00000392927 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.27
SYCP3-203ENST00000392927 TXNRD1Q16881 649 aa16.71■□□□□ 0.27
SYCP3-203ENST00000392927 ANO8Q9HCE9 1232 aaPredicted RBP16.71■□□□□ 0.27
SYCP3-203ENST00000392927 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.27
SYCP3-203ENST00000392927 PROM2Q8N271 834 aa16.7■□□□□ 0.26
SYCP3-203ENST00000392927 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
SYCP3-203ENST00000392927 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
SYCP3-203ENST00000392927 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
SYCP3-203ENST00000392927 LY75O60449 1722 aa16.69■□□□□ 0.26
SYCP3-203ENST00000392927 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
SYCP3-203ENST00000392927 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
SYCP3-203ENST00000392927 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
SYCP3-203ENST00000392927 EYA1Q99502 592 aa16.67■□□□□ 0.26
SYCP3-203ENST00000392927 ITGB4P16144 1822 aa16.66■□□□□ 0.26
SYCP3-203ENST00000392927 PRIM1P49642 420 aaKnown RBP16.66■□□□□ 0.26
SYCP3-203ENST00000392927 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
SYCP3-203ENST00000392927 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
SYCP3-203ENST00000392927 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
SYCP3-203ENST00000392927 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
SYCP3-203ENST00000392927 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
SYCP3-203ENST00000392927 CYP27B1O15528 508 aa16.63■□□□□ 0.25
SYCP3-203ENST00000392927 ZBTB22O15209 634 aa16.62■□□□□ 0.25
SYCP3-203ENST00000392927 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
SYCP3-203ENST00000392927 SPG7Q9UQ90 795 aa16.61■□□□□ 0.25
SYCP3-203ENST00000392927 C5P01031 1676 aa16.61■□□□□ 0.25
SYCP3-203ENST00000392927 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
SYCP3-203ENST00000392927 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
SYCP3-203ENST00000392927 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
SYCP3-203ENST00000392927 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
SYCP3-203ENST00000392927 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
SYCP3-203ENST00000392927 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
SYCP3-203ENST00000392927 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
SYCP3-203ENST00000392927 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
SYCP3-203ENST00000392927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
SYCP3-203ENST00000392927 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
SYCP3-203ENST00000392927 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
SYCP3-203ENST00000392927 MPRIPQ6WCQ1 1025 aa16.57■□□□□ 0.24
SYCP3-203ENST00000392927 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
SYCP3-203ENST00000392927 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
SYCP3-203ENST00000392927 PHKG2P15735 406 aa16.56■□□□□ 0.24
SYCP3-203ENST00000392927 KCNQ4P56696 695 aa16.56■□□□□ 0.24
SYCP3-203ENST00000392927 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
SYCP3-203ENST00000392927 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
SYCP3-203ENST00000392927 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
SYCP3-203ENST00000392927 CCNL1Q9UK58 526 aaPredicted RBP16.56■□□□□ 0.24
SYCP3-203ENST00000392927 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
SYCP3-203ENST00000392927 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
SYCP3-203ENST00000392927 KDRP35968 1356 aa16.54■□□□□ 0.24
SYCP3-203ENST00000392927 IL13P35225 146 aa16.54■□□□□ 0.24
SYCP3-203ENST00000392927 MTHFSP49914 203 aa16.54■□□□□ 0.24
SYCP3-203ENST00000392927 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
SYCP3-203ENST00000392927 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
SYCP3-203ENST00000392927 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
SYCP3-203ENST00000392927 PLEKHO1Q53GL0 409 aaPredicted RBP16.52■□□□□ 0.24
SYCP3-203ENST00000392927 PIGBQ92521 554 aa16.52■□□□□ 0.24
SYCP3-203ENST00000392927 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
SYCP3-203ENST00000392927 C4BP0C0L5 1744 aa16.52■□□□□ 0.24
SYCP3-203ENST00000392927 KDM6AO15550 1401 aaPredicted RBP16.52■□□□□ 0.23
SYCP3-203ENST00000392927 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.23
SYCP3-203ENST00000392927 CAPN15O75808 1086 aa16.51■□□□□ 0.23
SYCP3-203ENST00000392927 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
SYCP3-203ENST00000392927 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
SYCP3-203ENST00000392927 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
SYCP3-203ENST00000392927 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
SYCP3-203ENST00000392927 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
SYCP3-203ENST00000392927 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms