RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 FER1L4A9Z1Z3 1794 aa18.69■□□□□ 0.58
SHTN1-204ENST00000392903 RGPD8O14715 1765 aaPredicted RBP18.69■□□□□ 0.58
SHTN1-204ENST00000392903 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
SHTN1-204ENST00000392903 SLIT1O75093 1534 aa18.69■□□□□ 0.58
SHTN1-204ENST00000392903 SKOR2Q2VWA4 1001 aaPredicted RBP18.69■□□□□ 0.58
SHTN1-204ENST00000392903 GAS2L3Q86XJ1 694 aa18.69■□□□□ 0.58
SHTN1-204ENST00000392903 SNX21Q969T3 373 aa18.69■□□□□ 0.58
SHTN1-204ENST00000392903 NRKQ7Z2Y5 1582 aa18.69■□□□□ 0.58
SHTN1-204ENST00000392903 KCNA6P17658 529 aa18.68■□□□□ 0.58
SHTN1-204ENST00000392903 PTMSP20962 102 aa18.68■□□□□ 0.58
SHTN1-204ENST00000392903 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
SHTN1-204ENST00000392903 C1orf115Q9H7X2 142 aa18.68■□□□□ 0.58
SHTN1-204ENST00000392903 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
SHTN1-204ENST00000392903 KRT24Q2M2I5 525 aa18.68■□□□□ 0.58
SHTN1-204ENST00000392903 BRPF1P55201 1214 aaPredicted RBP18.67■□□□□ 0.58
SHTN1-204ENST00000392903 MAP3K19Q56UN5 1328 aa18.67■□□□□ 0.58
SHTN1-204ENST00000392903 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
SHTN1-204ENST00000392903 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
SHTN1-204ENST00000392903 GBP4Q96PP9 640 aa18.66■□□□□ 0.58
SHTN1-204ENST00000392903 ZBTB7BO15156 539 aaPredicted RBP18.66■□□□□ 0.58
SHTN1-204ENST00000392903 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
SHTN1-204ENST00000392903 RBM25P49756 843 aaKnown RBP18.65■□□□□ 0.58
SHTN1-204ENST00000392903 PEAK1Q9H792 1746 aa18.65■□□□□ 0.58
SHTN1-204ENST00000392903 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
SHTN1-204ENST00000392903 FOXO3O43524 673 aa18.64■□□□□ 0.58
SHTN1-204ENST00000392903 RAB3GAP1Q15042 981 aa18.64■□□□□ 0.58
SHTN1-204ENST00000392903 PPP1R9BQ96SB3 815 aa18.64■□□□□ 0.58
SHTN1-204ENST00000392903 NLRP6P59044 892 aa18.64■□□□□ 0.57
SHTN1-204ENST00000392903 CCDC173Q0VFZ6 552 aa18.64■□□□□ 0.57
SHTN1-204ENST00000392903 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.57
SHTN1-204ENST00000392903 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
SHTN1-204ENST00000392903 USP31Q70CQ4 1352 aa18.64■□□□□ 0.57
SHTN1-204ENST00000392903 AMPHP49418 695 aa18.63■□□□□ 0.57
SHTN1-204ENST00000392903 KIAA1211Q6ZU35 1233 aa18.63■□□□□ 0.57
SHTN1-204ENST00000392903 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
SHTN1-204ENST00000392903 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
SHTN1-204ENST00000392903 LNPKQ9C0E8 428 aa18.63■□□□□ 0.57
SHTN1-204ENST00000392903 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
SHTN1-204ENST00000392903 TERF1P54274 439 aa18.62■□□□□ 0.57
SHTN1-204ENST00000392903 ZSCAN30Q86W11 494 aa18.61■□□□□ 0.57
SHTN1-204ENST00000392903 OFD1O75665 1012 aa18.61■□□□□ 0.57
SHTN1-204ENST00000392903 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
SHTN1-204ENST00000392903 CHL1O00533 1208 aa18.6■□□□□ 0.57
SHTN1-204ENST00000392903 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
SHTN1-204ENST00000392903 C14orf37Q86TY3 774 aa18.6■□□□□ 0.57
SHTN1-204ENST00000392903 IBTKQ9P2D0 1353 aaPredicted RBP18.59■□□□□ 0.57
SHTN1-204ENST00000392903 NUCB1Q02818 461 aa18.59■□□□□ 0.57
SHTN1-204ENST00000392903 EYA1Q99502 592 aa18.59■□□□□ 0.57
SHTN1-204ENST00000392903 ABCC4O15439 1325 aa18.59■□□□□ 0.57
SHTN1-204ENST00000392903 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
SHTN1-204ENST00000392903 ANKRD45Q5TZF3 282 aa18.58■□□□□ 0.57
SHTN1-204ENST00000392903 CHD1LQ86WJ1 897 aa18.58■□□□□ 0.56
SHTN1-204ENST00000392903 FLT4P35916 1363 aa18.58■□□□□ 0.56
SHTN1-204ENST00000392903 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
SHTN1-204ENST00000392903 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
SHTN1-204ENST00000392903 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.57■□□□□ 0.56
SHTN1-204ENST00000392903 SIRT2Q8IXJ6 389 aa18.57■□□□□ 0.56
SHTN1-204ENST00000392903 LTV1Q96GA3 475 aaPredicted RBP18.57■□□□□ 0.56
SHTN1-204ENST00000392903 API5Q9BZZ5 524 aaKnown RBP18.57■□□□□ 0.56
SHTN1-204ENST00000392903 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
SHTN1-204ENST00000392903 PIK3R4Q99570 1358 aa18.57■□□□□ 0.56
SHTN1-204ENST00000392903 RIMS1Q86UR5 1692 aaKnown RBP18.56■□□□□ 0.56
SHTN1-204ENST00000392903 CLEC17AQ6ZS10 378 aa18.56■□□□□ 0.56
SHTN1-204ENST00000392903 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
SHTN1-204ENST00000392903 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
SHTN1-204ENST00000392903 ANP32BQ92688 251 aaKnown RBP18.55■□□□□ 0.56
SHTN1-204ENST00000392903 RGPD1P0DJD0 1748 aa18.55■□□□□ 0.56
SHTN1-204ENST00000392903 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
SHTN1-204ENST00000392903 XRN1Q8IZH2 1706 aaKnown RBP18.54■□□□□ 0.56
SHTN1-204ENST00000392903 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
SHTN1-204ENST00000392903 MAP7D2Q96T17 732 aa18.54■□□□□ 0.56
SHTN1-204ENST00000392903 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
SHTN1-204ENST00000392903 CEP170BQ9Y4F5 1589 aaPredicted RBP18.53■□□□□ 0.56
SHTN1-204ENST00000392903 MSNP26038 577 aaKnown RBP18.53■□□□□ 0.56
SHTN1-204ENST00000392903 KLHL40Q2TBA0 621 aa18.53■□□□□ 0.56
SHTN1-204ENST00000392903 HS1BP3Q53T59 392 aa18.53■□□□□ 0.56
SHTN1-204ENST00000392903 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
SHTN1-204ENST00000392903 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
SHTN1-204ENST00000392903 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
SHTN1-204ENST00000392903 HOXC9P31274 260 aa18.52■□□□□ 0.56
SHTN1-204ENST00000392903 CRB1P82279 1406 aa18.52■□□□□ 0.56
SHTN1-204ENST00000392903 PLEKHG5O94827 1062 aa18.52■□□□□ 0.55
SHTN1-204ENST00000392903 GCC1Q96CN9 775 aa18.52■□□□□ 0.55
SHTN1-204ENST00000392903 KIF2CQ99661 725 aa18.52■□□□□ 0.55
SHTN1-204ENST00000392903 IGSF1Q8N6C5 1336 aa18.52■□□□□ 0.55
SHTN1-204ENST00000392903 GOLGA6L22H0YM25 854 aa18.51■□□□□ 0.55
SHTN1-204ENST00000392903 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
SHTN1-204ENST00000392903 ANKARQ7Z5J8 1434 aa18.5■□□□□ 0.55
SHTN1-204ENST00000392903 KDRP35968 1356 aa18.5■□□□□ 0.55
SHTN1-204ENST00000392903 HAP1P54257 671 aaPredicted RBP18.5■□□□□ 0.55
SHTN1-204ENST00000392903 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
SHTN1-204ENST00000392903 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
SHTN1-204ENST00000392903 KIAA0232Q92628 1395 aa18.49■□□□□ 0.55
SHTN1-204ENST00000392903 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
SHTN1-204ENST00000392903 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
SHTN1-204ENST00000392903 INTS3Q68E01 1043 aaKnown RBP18.49■□□□□ 0.55
SHTN1-204ENST00000392903 PRDM4Q9UKN5 801 aa18.49■□□□□ 0.55
SHTN1-204ENST00000392903 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
SHTN1-204ENST00000392903 BMP2KLQ5H9B9 411 aa18.48■□□□□ 0.55
SHTN1-204ENST00000392903 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms