RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
CDCA4-202ENST00000392590 APBA3O96018 575 aa27.96■■■□□ 2.07
CDCA4-202ENST00000392590 CFAP53Q96M91 514 aa27.93■■■□□ 2.06
CDCA4-202ENST00000392590 BCL11BQ9C0K0 894 aaPredicted RBP27.93■■■□□ 2.06
CDCA4-202ENST00000392590 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 SPG7Q9UQ90 795 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 PARD3Q8TEW0 1356 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 PCDH11XQ9BZA7 1347 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 PCDH11YQ9BZA8 1340 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 EN1Q05925 392 aaPredicted RBP27.92■■■□□ 2.06
CDCA4-202ENST00000392590 AEBP1Q8IUX7 1158 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 ACSBG1Q96GR2 724 aa27.92■■■□□ 2.06
CDCA4-202ENST00000392590 PTF1AQ7RTS3 328 aa27.91■■■□□ 2.06
CDCA4-202ENST00000392590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.91■■■□□ 2.06
CDCA4-202ENST00000392590 RGPD1P0DJD0 1748 aa27.89■■■□□ 2.06
CDCA4-202ENST00000392590 KCNQ2O43526 872 aa27.89■■■□□ 2.06
CDCA4-202ENST00000392590 RALBP1Q15311 655 aa27.89■■■□□ 2.06
CDCA4-202ENST00000392590 CYP27B1O15528 508 aa27.87■■■□□ 2.05
CDCA4-202ENST00000392590 U2SURPO15042 1029 aaKnown RBP27.87■■■□□ 2.05
CDCA4-202ENST00000392590 PLEKHO1Q53GL0 409 aaPredicted RBP27.86■■■□□ 2.05
CDCA4-202ENST00000392590 KDRP35968 1356 aa27.86■■■□□ 2.05
CDCA4-202ENST00000392590 COL3A1P02461 1466 aaPredicted RBP27.85■■■□□ 2.05
CDCA4-202ENST00000392590 HMOX1P09601 288 aa27.85■■■□□ 2.05
CDCA4-202ENST00000392590 EZH2Q15910 746 aaKnown RBP27.85■■■□□ 2.05
CDCA4-202ENST00000392590 CAMKK2Q96RR4 588 aa27.85■■■□□ 2.05
CDCA4-202ENST00000392590 PLEKHG2Q9H7P9 1386 aa27.85■■■□□ 2.05
CDCA4-202ENST00000392590 AMOTQ4VCS5 1084 aa27.84■■■□□ 2.05
CDCA4-202ENST00000392590 TNS1Q9HBL0 1735 aaKnown RBP27.83■■■□□ 2.05
CDCA4-202ENST00000392590 PRIM1P49642 420 aaKnown RBP27.83■■■□□ 2.05
CDCA4-202ENST00000392590 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
CDCA4-202ENST00000392590 IFNL2Q8IZJ0 200 aa27.82■■■□□ 2.04
CDCA4-202ENST00000392590 SYTL4Q96C24 671 aaPredicted RBP27.82■■■□□ 2.04
CDCA4-202ENST00000392590 PLSCR1O15162 318 aa27.82■■■□□ 2.04
CDCA4-202ENST00000392590 PHKG2P15735 406 aa27.8■■■□□ 2.04
CDCA4-202ENST00000392590 NKX1-1Q15270 411 aaPredicted RBP27.8■■■□□ 2.04
CDCA4-202ENST00000392590 SHANK3Q9BYB0 1731 aa27.8■■■□□ 2.04
CDCA4-202ENST00000392590 SBF2Q86WG5 1849 aa27.79■■■□□ 2.04
CDCA4-202ENST00000392590 PKD1L3Q7Z443 1732 aa27.78■■■□□ 2.04
CDCA4-202ENST00000392590 ZNF530Q6P9A1 599 aaPredicted RBP27.77■■■□□ 2.04
CDCA4-202ENST00000392590 U2AF1L5P0DN76 240 aaPredicted RBP27.76■■■□□ 2.03
CDCA4-202ENST00000392590 U2AF1Q01081 240 aaKnown RBP eCLIP27.76■■■□□ 2.03
CDCA4-202ENST00000392590 MYBBP1AQ9BQG0 1328 aaKnown RBP27.76■■■□□ 2.03
CDCA4-202ENST00000392590 PRKRIP1Q9H875 184 aaPredicted RBP27.75■■■□□ 2.03
CDCA4-202ENST00000392590 NHSQ6T4R5 1651 aa27.75■■■□□ 2.03
CDCA4-202ENST00000392590 HSP90AB1P08238 724 aaKnown RBP27.74■■■□□ 2.03
CDCA4-202ENST00000392590 C1orf141Q5JVX7 400 aa27.74■■■□□ 2.03
CDCA4-202ENST00000392590 MPRIPQ6WCQ1 1025 aa27.72■■■□□ 2.03
CDCA4-202ENST00000392590 PROM2Q8N271 834 aa27.72■■■□□ 2.03
CDCA4-202ENST00000392590 DCAF5Q96JK2 942 aa27.71■■■□□ 2.03
CDCA4-202ENST00000392590 TXNRD1Q16881 649 aa27.7■■■□□ 2.02
CDCA4-202ENST00000392590 MTHFSDQ2M296 383 aaKnown RBP27.69■■■□□ 2.02
CDCA4-202ENST00000392590 RSPH6AQ9H0K4 717 aa27.69■■■□□ 2.02
CDCA4-202ENST00000392590 FCHSD2O94868 740 aa27.68■■■□□ 2.02
CDCA4-202ENST00000392590 PRKAR2BP31323 418 aa27.68■■■□□ 2.02
CDCA4-202ENST00000392590 AKAP4Q5JQC9 854 aa27.68■■■□□ 2.02
CDCA4-202ENST00000392590 DOT1LQ8TEK3 1739 aa27.68■■■□□ 2.02
CDCA4-202ENST00000392590 KAT6BQ8WYB5 2073 aa27.67■■■□□ 2.02
CDCA4-202ENST00000392590 NBPF14Q5TI25 921 aa27.67■■■□□ 2.02
CDCA4-202ENST00000392590 PIGBQ92521 554 aa27.67■■■□□ 2.02
CDCA4-202ENST00000392590 TMOD3Q9NYL9 352 aa27.66■■■□□ 2.02
CDCA4-202ENST00000392590 ERVV-2B6SEH9 535 aa27.65■■■□□ 2.02
CDCA4-202ENST00000392590 PHACTR3Q96KR7 559 aa27.64■■■□□ 2.02
CDCA4-202ENST00000392590 BTAF1O14981 1849 aa27.63■■■□□ 2.01
CDCA4-202ENST00000392590 GAS2L2Q8NHY3 880 aa27.63■■■□□ 2.01
CDCA4-202ENST00000392590 CABP4P57796 275 aa27.62■■■□□ 2.01
CDCA4-202ENST00000392590 RGPD3A6NKT7 1758 aaPredicted RBP27.61■■■□□ 2.01
CDCA4-202ENST00000392590 RGPD4Q7Z3J3 1758 aa27.61■■■□□ 2.01
CDCA4-202ENST00000392590 KDM6AO15550 1401 aaPredicted RBP27.61■■■□□ 2.01
CDCA4-202ENST00000392590 SLC27A3Q5K4L6 730 aa27.61■■■□□ 2.01
CDCA4-202ENST00000392590 PSDA5PKW4 1024 aaPredicted RBP27.6■■■□□ 2.01
CDCA4-202ENST00000392590 R3HDM1Q15032 1099 aaKnown RBP27.6■■■□□ 2.01
CDCA4-202ENST00000392590 SMARCC1Q92922 1105 aaPredicted RBP27.6■■■□□ 2.01
CDCA4-202ENST00000392590 TOGARAM1Q9Y4F4 1720 aa27.59■■■□□ 2.01
CDCA4-202ENST00000392590 ANP32CO43423 234 aa27.59■■■□□ 2.01
CDCA4-202ENST00000392590 RREB1Q92766 1687 aa27.59■■■□□ 2.01
CDCA4-202ENST00000392590 LGR6Q9HBX8 967 aa27.58■■■□□ 2.01
CDCA4-202ENST00000392590 LRRC4BQ9NT99 713 aa27.58■■■□□ 2.01
CDCA4-202ENST00000392590 NEFMP07197 916 aa27.57■■■□□ 2
CDCA4-202ENST00000392590 PNNQ9H307 717 aaKnown RBP27.57■■■□□ 2
CDCA4-202ENST00000392590 PALLDQ8WX93 1383 aa27.57■■■□□ 2
CDCA4-202ENST00000392590 GNAT3A8MTJ3 354 aa27.57■■■□□ 2
CDCA4-202ENST00000392590 RNMTO43148 476 aaKnown RBP27.57■■■□□ 2
CDCA4-202ENST00000392590 NFATC2IPQ8NCF5 419 aa27.57■■■□□ 2
CDCA4-202ENST00000392590 CCNL1Q9UK58 526 aaPredicted RBP27.57■■■□□ 2
CDCA4-202ENST00000392590 ASAP1Q9ULH1 1129 aa27.57■■■□□ 2
CDCA4-202ENST00000392590 KCNQ4P56696 695 aa27.56■■■□□ 2
CDCA4-202ENST00000392590 ANO8Q9HCE9 1232 aaPredicted RBP27.55■■■□□ 2
CDCA4-202ENST00000392590 ATG3Q9NT62 314 aa27.55■■■□□ 2
CDCA4-202ENST00000392590 NUP188Q5SRE5 1749 aa27.54■■■□□ 2
CDCA4-202ENST00000392590 STK32BQ9NY57 414 aa27.54■■■□□ 2
CDCA4-202ENST00000392590 MAP3K5Q99683 1374 aa27.54■■■□□ 2
CDCA4-202ENST00000392590 WDR43Q15061 677 aaKnown RBP eCLIP27.53■■■□□ 2
CDCA4-202ENST00000392590 PLEKHF1Q96S99 279 aa27.53■■■□□ 2
CDCA4-202ENST00000392590 SLC52A2Q9HAB3 445 aa27.52■■■□□ 2
CDCA4-202ENST00000392590 ITGB4P16144 1822 aa27.52■■■□□ 2
CDCA4-202ENST00000392590 SLC15A2Q16348 729 aa27.51■■□□□ 1.99
CDCA4-202ENST00000392590 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
CDCA4-202ENST00000392590 MAPK8IP3Q9UPT6 1336 aa27.49■■□□□ 1.99
CDCA4-202ENST00000392590 LOC102724428A0A0B4J2F2 783 aa27.48■■□□□ 1.99
CDCA4-202ENST00000392590 HMGB2P26583 209 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms