RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
TRAF3IP2-208ENST00000392556 ANP32AP39687 249 aaKnown RBP15.11■□□□□ 0.01
TRAF3IP2-208ENST00000392556 TMF1P82094 1093 aa15.11■□□□□ 0.01
TRAF3IP2-208ENST00000392556 STK32BQ9NY57 414 aa15.11■□□□□ 0.01
TRAF3IP2-208ENST00000392556 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
TRAF3IP2-208ENST00000392556 PPP1R1BQ9UD71 204 aaPredicted RBP15.11■□□□□ 0.01
TRAF3IP2-208ENST00000392556 LTN1O94822 1766 aa15.1■□□□□ 0.01
TRAF3IP2-208ENST00000392556 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
TRAF3IP2-208ENST00000392556 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
TRAF3IP2-208ENST00000392556 NHSQ6T4R5 1651 aa15.1■□□□□ 0.01
TRAF3IP2-208ENST00000392556 PROM2Q8N271 834 aa15.08■□□□□ 0.01
TRAF3IP2-208ENST00000392556 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0
TRAF3IP2-208ENST00000392556 ANP32CO43423 234 aa15.07■□□□□ 0
TRAF3IP2-208ENST00000392556 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
TRAF3IP2-208ENST00000392556 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
TRAF3IP2-208ENST00000392556 USP47Q96K76 1375 aa15.07■□□□□ 0
TRAF3IP2-208ENST00000392556 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
TRAF3IP2-208ENST00000392556 SLC15A2Q16348 729 aa15.07■□□□□ 0
TRAF3IP2-208ENST00000392556 AMPHP49418 695 aa15.06■□□□□ 0
TRAF3IP2-208ENST00000392556 CASZ1Q86V15 1759 aa15.06■□□□□ 0
TRAF3IP2-208ENST00000392556 PTF1AQ7RTS3 328 aa15.05■□□□□ 0
TRAF3IP2-208ENST00000392556 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
TRAF3IP2-208ENST00000392556 HOXC9P31274 260 aa15.05■□□□□ -0
TRAF3IP2-208ENST00000392556 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
TRAF3IP2-208ENST00000392556 SRCAPQ6ZRS2 3230 aa15.04■□□□□ -0
TRAF3IP2-208ENST00000392556 SMG6Q86US8 1419 aaKnown RBP15.04■□□□□ -0
TRAF3IP2-208ENST00000392556 ZMYND15Q9H091 742 aa15.04■□□□□ -0
TRAF3IP2-208ENST00000392556 MTFR1LQ9H019 292 aa15.03■□□□□ -0
TRAF3IP2-208ENST00000392556 FYB1O15117 783 aa15.02□□□□□ -0.01
TRAF3IP2-208ENST00000392556 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
TRAF3IP2-208ENST00000392556 ACSBG1Q96GR2 724 aa15.01□□□□□ -0.01
TRAF3IP2-208ENST00000392556 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
TRAF3IP2-208ENST00000392556 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
TRAF3IP2-208ENST00000392556 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
TRAF3IP2-208ENST00000392556 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
TRAF3IP2-208ENST00000392556 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 INSRP06213 1382 aa14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 PTGER2P43116 358 aa14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 DDX54Q8TDD1 881 aaKnown RBP14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 BRPF3Q9ULD4 1205 aa14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 BTAF1O14981 1849 aa14.99□□□□□ -0.01
TRAF3IP2-208ENST00000392556 FLT4P35916 1363 aa14.98□□□□□ -0.01
TRAF3IP2-208ENST00000392556 ZBTB7AO95365 584 aa14.98□□□□□ -0.01
TRAF3IP2-208ENST00000392556 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
TRAF3IP2-208ENST00000392556 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
TRAF3IP2-208ENST00000392556 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
TRAF3IP2-208ENST00000392556 NEFMP07197 916 aa14.97□□□□□ -0.01
TRAF3IP2-208ENST00000392556 TATP17735 454 aaPredicted RBP14.96□□□□□ -0.01
TRAF3IP2-208ENST00000392556 YY1P25490 414 aa14.95□□□□□ -0.02
TRAF3IP2-208ENST00000392556 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
TRAF3IP2-208ENST00000392556 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
TRAF3IP2-208ENST00000392556 NSD2O96028 1365 aa14.95□□□□□ -0.02
TRAF3IP2-208ENST00000392556 B4GALNT3Q6L9W6 998 aa14.95□□□□□ -0.02
TRAF3IP2-208ENST00000392556 QSER1Q2KHR3 1735 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 MEGF6O75095 1541 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 PLEKHG2Q9H7P9 1386 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 PCDH11XQ9BZA7 1347 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 PCDH11YQ9BZA8 1340 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 GSE1Q14687 1217 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 RRS1Q15050 365 aaKnown RBP14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 NBPF6Q5VWK0 638 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 NBPF4Q96M43 638 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 KIF20BQ96Q89 1820 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 PRIM1P49642 420 aaKnown RBP14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 VSIG10Q8N0Z9 540 aa14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 PDGFDQ9GZP0 370 aaPredicted RBP14.94□□□□□ -0.02
TRAF3IP2-208ENST00000392556 ARXQ96QS3 562 aa14.93□□□□□ -0.02
TRAF3IP2-208ENST00000392556 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
TRAF3IP2-208ENST00000392556 MYOM1P52179 1685 aa14.93□□□□□ -0.02
TRAF3IP2-208ENST00000392556 SYT17Q9BSW7 474 aa14.92□□□□□ -0.02
TRAF3IP2-208ENST00000392556 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
TRAF3IP2-208ENST00000392556 POLD1P28340 1107 aa14.92□□□□□ -0.02
TRAF3IP2-208ENST00000392556 HNRNPUQ00839 825 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRAF3IP2-208ENST00000392556 SYTL4Q96C24 671 aaPredicted RBP14.92□□□□□ -0.02
TRAF3IP2-208ENST00000392556 ZNF827Q17R98 1081 aa14.91□□□□□ -0.02
TRAF3IP2-208ENST00000392556 FBLN1P23142 703 aa14.91□□□□□ -0.02
TRAF3IP2-208ENST00000392556 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
TRAF3IP2-208ENST00000392556 FHDC1Q9C0D6 1143 aaPredicted RBP14.91□□□□□ -0.02
TRAF3IP2-208ENST00000392556 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
TRAF3IP2-208ENST00000392556 CARD14Q9BXL6 1004 aa14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 DOT1LQ8TEK3 1739 aa14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 SHANK3Q9BYB0 1731 aa14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 LY75O60449 1722 aa14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 TFCP2L1Q9NZI6 479 aa14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 CCNL1Q9UK58 526 aaPredicted RBP14.9□□□□□ -0.02
TRAF3IP2-208ENST00000392556 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
TRAF3IP2-208ENST00000392556 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
TRAF3IP2-208ENST00000392556 PNPLA7Q6ZV29 1317 aa14.89□□□□□ -0.03
TRAF3IP2-208ENST00000392556 SPG7Q9UQ90 795 aa14.88□□□□□ -0.03
TRAF3IP2-208ENST00000392556 COL24A1Q17RW2 1714 aa14.87□□□□□ -0.03
TRAF3IP2-208ENST00000392556 RGPD2P0DJD1 1756 aa14.87□□□□□ -0.03
TRAF3IP2-208ENST00000392556 NKX1-1Q15270 411 aaPredicted RBP14.87□□□□□ -0.03
TRAF3IP2-208ENST00000392556 ANKRD26Q9UPS8 1709 aa14.87□□□□□ -0.03
TRAF3IP2-208ENST00000392556 KAT6BQ8WYB5 2073 aa14.87□□□□□ -0.03
TRAF3IP2-208ENST00000392556 EIF4G2P78344 907 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAF3IP2-208ENST00000392556 USHBP1Q8N6Y0 703 aa14.86□□□□□ -0.03
TRAF3IP2-208ENST00000392556 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms