RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 TATP17735 454 aaPredicted RBP16.13■□□□□ 0.17
RFC4-202ENST00000392481 EYA1Q99502 592 aa16.13■□□□□ 0.17
RFC4-202ENST00000392481 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
RFC4-202ENST00000392481 EIF4A2Q14240 407 aaKnown RBP16.12■□□□□ 0.17
RFC4-202ENST00000392481 RGPD3A6NKT7 1758 aaPredicted RBP16.12■□□□□ 0.17
RFC4-202ENST00000392481 RGPD4Q7Z3J3 1758 aa16.12■□□□□ 0.17
RFC4-202ENST00000392481 KCNQ2O43526 872 aa16.11■□□□□ 0.17
RFC4-202ENST00000392481 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
RFC4-202ENST00000392481 RREB1Q92766 1687 aa16.11■□□□□ 0.17
RFC4-202ENST00000392481 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
RFC4-202ENST00000392481 ACSBG1Q96GR2 724 aa16.11■□□□□ 0.17
RFC4-202ENST00000392481 SHANK3Q9BYB0 1731 aa16.1■□□□□ 0.17
RFC4-202ENST00000392481 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.17
RFC4-202ENST00000392481 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.17
RFC4-202ENST00000392481 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.16
RFC4-202ENST00000392481 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
RFC4-202ENST00000392481 MTHFSP49914 203 aa16.07■□□□□ 0.16
RFC4-202ENST00000392481 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
RFC4-202ENST00000392481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■■□□ 17.2
RFC4-202ENST00000392481 PKD1L3Q7Z443 1732 aa16.06■□□□□ 0.16
RFC4-202ENST00000392481 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
RFC4-202ENST00000392481 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
RFC4-202ENST00000392481 PROM2Q8N271 834 aa16.06■□□□□ 0.16
RFC4-202ENST00000392481 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
RFC4-202ENST00000392481 BTAF1O14981 1849 aa16.06■□□□□ 0.16
RFC4-202ENST00000392481 CYP27B1O15528 508 aa16.05■□□□□ 0.16
RFC4-202ENST00000392481 PRIM1P49642 420 aaKnown RBP16.05■□□□□ 0.16
RFC4-202ENST00000392481 R3HDM1Q15032 1099 aaKnown RBP16.05■□□□□ 0.16
RFC4-202ENST00000392481 TXNRD1Q16881 649 aa16.04■□□□□ 0.16
RFC4-202ENST00000392481 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
RFC4-202ENST00000392481 IL13P35225 146 aa16.03■□□□□ 0.16
RFC4-202ENST00000392481 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
RFC4-202ENST00000392481 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
RFC4-202ENST00000392481 NKX1-1Q15270 411 aaPredicted RBP16.02■□□□□ 0.15
RFC4-202ENST00000392481 KDRP35968 1356 aa16■□□□□ 0.15
RFC4-202ENST00000392481 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
RFC4-202ENST00000392481 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
RFC4-202ENST00000392481 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
RFC4-202ENST00000392481 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
RFC4-202ENST00000392481 PHKG2P15735 406 aa15.99■□□□□ 0.15
RFC4-202ENST00000392481 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
RFC4-202ENST00000392481 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
RFC4-202ENST00000392481 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
RFC4-202ENST00000392481 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
RFC4-202ENST00000392481 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
RFC4-202ENST00000392481 TOGARAM1Q9Y4F4 1720 aa15.96■□□□□ 0.15
RFC4-202ENST00000392481 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
RFC4-202ENST00000392481 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.15
RFC4-202ENST00000392481 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
RFC4-202ENST00000392481 COL3A1P02461 1466 aaPredicted RBP15.96■□□□□ 0.14
RFC4-202ENST00000392481 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
RFC4-202ENST00000392481 ZNF530Q6P9A1 599 aaPredicted RBP15.95■□□□□ 0.14
RFC4-202ENST00000392481 ITGB4P16144 1822 aa15.95■□□□□ 0.14
RFC4-202ENST00000392481 LY75O60449 1722 aa15.95■□□□□ 0.14
RFC4-202ENST00000392481 LRP5O75197 1615 aa15.95■□□□□ 0.14
RFC4-202ENST00000392481 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
RFC4-202ENST00000392481 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
RFC4-202ENST00000392481 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
RFC4-202ENST00000392481 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
RFC4-202ENST00000392481 PIGBQ92521 554 aa15.94■□□□□ 0.14
RFC4-202ENST00000392481 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
RFC4-202ENST00000392481 HMOX1P09601 288 aa15.93■□□□□ 0.14
RFC4-202ENST00000392481 C1orf141Q5JVX7 400 aa15.93■□□□□ 0.14
RFC4-202ENST00000392481 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
RFC4-202ENST00000392481 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
RFC4-202ENST00000392481 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
RFC4-202ENST00000392481 CCNL1Q9UK58 526 aaPredicted RBP15.92■□□□□ 0.14
RFC4-202ENST00000392481 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
RFC4-202ENST00000392481 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
RFC4-202ENST00000392481 HMGB2P26583 209 aaKnown RBP15.91■□□□□ 0.14
RFC4-202ENST00000392481 KCNQ4P56696 695 aa15.91■□□□□ 0.14
RFC4-202ENST00000392481 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
RFC4-202ENST00000392481 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
RFC4-202ENST00000392481 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
RFC4-202ENST00000392481 CASZ1Q86V15 1759 aa15.89■□□□□ 0.13
RFC4-202ENST00000392481 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
RFC4-202ENST00000392481 SPON1Q9HCB6 807 aa15.89■□□□□ 0.13
RFC4-202ENST00000392481 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
RFC4-202ENST00000392481 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
RFC4-202ENST00000392481 PDGFDQ9GZP0 370 aaPredicted RBP15.88■□□□□ 0.13
RFC4-202ENST00000392481 ASAP1Q9ULH1 1129 aa15.87■□□□□ 0.13
RFC4-202ENST00000392481 CABP4P57796 275 aa15.86■□□□□ 0.13
RFC4-202ENST00000392481 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
RFC4-202ENST00000392481 ATG3Q9NT62 314 aa15.86■□□□□ 0.13
RFC4-202ENST00000392481 LOC102724428A0A0B4J2F2 783 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 SIK1P57059 783 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 RALBP1Q15311 655 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 QSER1Q2KHR3 1735 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 SCN11AQ9UI33 1791 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 ZBTB7AO95365 584 aa15.85■□□□□ 0.13
RFC4-202ENST00000392481 C5P01031 1676 aa15.84■□□□□ 0.13
RFC4-202ENST00000392481 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
RFC4-202ENST00000392481 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
RFC4-202ENST00000392481 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
RFC4-202ENST00000392481 NFATC2IPQ8NCF5 419 aa15.84■□□□□ 0.13
RFC4-202ENST00000392481 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
RFC4-202ENST00000392481 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
RFC4-202ENST00000392481 FCHSD2O94868 740 aa15.83■□□□□ 0.12
RFC4-202ENST00000392481 GAS2L2Q8NHY3 880 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms