RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 IL16Q14005 1332 aa20.04■□□□□ 0.8
SNX9-201ENST00000392185 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 RLBP1P12271 317 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 MCTP1Q6DN14 999 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 AACSQ86V21 672 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 IFNL2Q8IZJ0 200 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 DNAAF4Q8WXU2 420 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 DDX17Q92841 729 aaKnown RBP20.03■□□□□ 0.8
SNX9-201ENST00000392185 MYD88Q99836 296 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 CDC42BPAQ5VT25 1732 aa20.03■□□□□ 0.8
SNX9-201ENST00000392185 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
SNX9-201ENST00000392185 NGLY1Q96IV0 654 aa20.02■□□□□ 0.8
SNX9-201ENST00000392185 FLT4P35916 1363 aa20.02■□□□□ 0.8
SNX9-201ENST00000392185 CCDC27Q2M243 656 aa20.02■□□□□ 0.79
SNX9-201ENST00000392185 FBXW7Q969H0 707 aa20.02■□□□□ 0.79
SNX9-201ENST00000392185 RSPH6AQ9H0K4 717 aa20.02■□□□□ 0.79
SNX9-201ENST00000392185 VPS37CA5D8V6 355 aaPredicted RBP20.01■□□□□ 0.79
SNX9-201ENST00000392185 GOLGA6L3A6NEY3 463 aa20.01■□□□□ 0.79
SNX9-201ENST00000392185 FOSBP53539 338 aa20.01■□□□□ 0.79
SNX9-201ENST00000392185 ERC1Q8IUD2 1116 aa20.01■□□□□ 0.79
SNX9-201ENST00000392185 JARID2Q92833 1246 aaPredicted RBP20.01■□□□□ 0.79
SNX9-201ENST00000392185 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
SNX9-201ENST00000392185 METP08581 1390 aa20■□□□□ 0.79
SNX9-201ENST00000392185 ZBTB3Q9H5J0 574 aa20■□□□□ 0.79
SNX9-201ENST00000392185 PIP4K2AP48426 406 aaPredicted RBP20■□□□□ 0.79
SNX9-201ENST00000392185 SF3A1Q15459 793 aaKnown RBP20■□□□□ 0.79
SNX9-201ENST00000392185 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
SNX9-201ENST00000392185 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
SNX9-201ENST00000392185 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
SNX9-201ENST00000392185 DRC7Q8IY82 874 aa19.99■□□□□ 0.79
SNX9-201ENST00000392185 KIF3AQ9Y496 699 aa19.99■□□□□ 0.79
SNX9-201ENST00000392185 TRDNQ13061 729 aa19.99■□□□□ 0.79
SNX9-201ENST00000392185 MEIS3Q99687 375 aa19.99■□□□□ 0.79
SNX9-201ENST00000392185 ATP5J2-PTCD1G3V325 749 aa19.99■□□□□ 0.79
SNX9-201ENST00000392185 HOXC9P31274 260 aa19.99■□□□□ 0.79
SNX9-201ENST00000392185 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
SNX9-201ENST00000392185 STARD3NLO95772 234 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 PTMSP20962 102 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 EXOC5O00471 708 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 FMNL2Q96PY5 1086 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 VAMP4O75379 141 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 NFKBIBQ15653 356 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 NPC1L1Q9UHC9 1359 aa19.98■□□□□ 0.79
SNX9-201ENST00000392185 CPLX1O14810 134 aa19.97■□□□□ 0.79
SNX9-201ENST00000392185 PRDM15P57071 1507 aaPredicted RBP19.97■□□□□ 0.79
SNX9-201ENST00000392185 IL13P35225 146 aa19.97■□□□□ 0.79
SNX9-201ENST00000392185 SMC3Q9UQE7 1217 aa19.97■□□□□ 0.79
SNX9-201ENST00000392185 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
SNX9-201ENST00000392185 CEP126Q9P2H0 1117 aa19.96■□□□□ 0.79
SNX9-201ENST00000392185 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
SNX9-201ENST00000392185 MAP3K2Q9Y2U5 619 aa19.96■□□□□ 0.79
SNX9-201ENST00000392185 CWC27Q6UX04 472 aaKnown RBP19.95■□□□□ 0.78
SNX9-201ENST00000392185 FKBP4Q02790 459 aaKnown RBP eCLIP19.95■□□□□ 0.78
SNX9-201ENST00000392185 GPTP24298 496 aa19.95■□□□□ 0.78
SNX9-201ENST00000392185 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
SNX9-201ENST00000392185 A0A087WZG4 1122 aa19.95■□□□□ 0.78
SNX9-201ENST00000392185 TSHZ3Q63HK5 1081 aa19.95■□□□□ 0.78
SNX9-201ENST00000392185 RALYLQ86SE5 291 aaKnown RBP19.95■□□□□ 0.78
SNX9-201ENST00000392185 MPHOSPH8Q99549 860 aa19.95■□□□□ 0.78
SNX9-201ENST00000392185 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
SNX9-201ENST00000392185 CDK11BP21127 795 aaKnown RBP19.94■□□□□ 0.78
SNX9-201ENST00000392185 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
SNX9-201ENST00000392185 RAD21O60216 631 aa19.94■□□□□ 0.78
SNX9-201ENST00000392185 PTPRCP08575 1304 aa19.94■□□□□ 0.78
SNX9-201ENST00000392185 KIF1BPQ96EK5 621 aa19.93■□□□□ 0.78
SNX9-201ENST00000392185 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
SNX9-201ENST00000392185 NFATC2IPQ8NCF5 419 aa19.93■□□□□ 0.78
SNX9-201ENST00000392185 MRPL50Q8N5N7 158 aaKnown RBP19.93■□□□□ 0.78
SNX9-201ENST00000392185 IP6K1Q92551 441 aa19.93■□□□□ 0.78
SNX9-201ENST00000392185 CCDC8Q9H0W5 538 aaPredicted RBP19.93■□□□□ 0.78
SNX9-201ENST00000392185 HYPKQ9NX55 129 aa19.93■□□□□ 0.78
SNX9-201ENST00000392185 TRPM2O94759 1503 aa19.93■□□□□ 0.78
SNX9-201ENST00000392185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.92■□□□□ 0.78
SNX9-201ENST00000392185 NOL10Q9BSC4 688 aaKnown RBP19.92■□□□□ 0.78
SNX9-201ENST00000392185 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
SNX9-201ENST00000392185 MX1P20591 662 aa19.92■□□□□ 0.78
SNX9-201ENST00000392185 CCDC158Q5M9N0 1113 aa19.92■□□□□ 0.78
SNX9-201ENST00000392185 NFXL1Q6ZNB6 911 aa19.92■□□□□ 0.78
SNX9-201ENST00000392185 PLEKHG3A1L390 1219 aa19.92■□□□□ 0.78
SNX9-201ENST00000392185 KDM4AO75164 1064 aa19.92■□□□□ 0.78
SNX9-201ENST00000392185 NAP1L5Q96NT1 182 aaPredicted RBP19.92■□□□□ 0.78
SNX9-201ENST00000392185 UBAP1LF5GYI3 381 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 AKAP17AQ02040 695 aaKnown RBP19.91■□□□□ 0.78
SNX9-201ENST00000392185 UBE3BQ7Z3V4 1068 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
SNX9-201ENST00000392185 ATP6V1DQ9Y5K8 247 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 TTC39AQ5SRH9 613 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 BOLA2Q9H3K6 86 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 GSE1Q14687 1217 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 CSPP1Q1MSJ5 1256 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 KDM5DQ9BY66 1539 aa19.91■□□□□ 0.78
SNX9-201ENST00000392185 RABEP1Q15276 862 aa19.9■□□□□ 0.78
SNX9-201ENST00000392185 AKAP4Q5JQC9 854 aa19.9■□□□□ 0.78
SNX9-201ENST00000392185 PPP1R42Q7Z4L9 355 aa19.9■□□□□ 0.78
SNX9-201ENST00000392185 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
SNX9-201ENST00000392185 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
SNX9-201ENST00000392185 RASSF8Q8NHQ8 419 aa19.9■□□□□ 0.78
SNX9-201ENST00000392185 STK11IPQ8N1F8 1099 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms