RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 MORC1Q86VD1 984 aa26.8■■□□□ 1.88
PDCD2-202ENST00000392090 MEGF6O75095 1541 aa26.8■■□□□ 1.88
PDCD2-202ENST00000392090 RREB1Q92766 1687 aa26.79■■□□□ 1.88
PDCD2-202ENST00000392090 TATP17735 454 aaPredicted RBP26.79■■□□□ 1.88
PDCD2-202ENST00000392090 NUP188Q5SRE5 1749 aa26.77■■□□□ 1.88
PDCD2-202ENST00000392090 RGPD3A6NKT7 1758 aaPredicted RBP26.76■■□□□ 1.88
PDCD2-202ENST00000392090 RGPD4Q7Z3J3 1758 aa26.76■■□□□ 1.88
PDCD2-202ENST00000392090 NHSQ6T4R5 1651 aa26.76■■□□□ 1.87
PDCD2-202ENST00000392090 AMER1Q5JTC6 1135 aaPredicted RBP26.71■■□□□ 1.87
PDCD2-202ENST00000392090 SYTL4Q96C24 671 aaPredicted RBP26.71■■□□□ 1.87
PDCD2-202ENST00000392090 EYA1Q99502 592 aa26.71■■□□□ 1.87
PDCD2-202ENST00000392090 EIF4A2Q14240 407 aaKnown RBP26.7■■□□□ 1.86
PDCD2-202ENST00000392090 TXNRD1Q16881 649 aa26.7■■□□□ 1.86
PDCD2-202ENST00000392090 SHANK3Q9BYB0 1731 aa26.7■■□□□ 1.86
PDCD2-202ENST00000392090 PROM2Q8N271 834 aa26.69■■□□□ 1.86
PDCD2-202ENST00000392090 BTAF1O14981 1849 aa26.69■■□□□ 1.86
PDCD2-202ENST00000392090 PCDH11XQ9BZA7 1347 aa26.68■■□□□ 1.86
PDCD2-202ENST00000392090 PCDH11YQ9BZA8 1340 aa26.68■■□□□ 1.86
PDCD2-202ENST00000392090 PRIM1P49642 420 aaKnown RBP26.68■■□□□ 1.86
PDCD2-202ENST00000392090 PER1O15534 1290 aaPredicted RBP26.66■■□□□ 1.86
PDCD2-202ENST00000392090 NCAPD2Q15021 1401 aa26.65■■□□□ 1.86
PDCD2-202ENST00000392090 CC2D1BQ5T0F9 858 aaKnown RBP26.65■■□□□ 1.86
PDCD2-202ENST00000392090 SPG7Q9UQ90 795 aa26.64■■□□□ 1.86
PDCD2-202ENST00000392090 DOT1LQ8TEK3 1739 aa26.64■■□□□ 1.85
PDCD2-202ENST00000392090 ANO8Q9HCE9 1232 aaPredicted RBP26.63■■□□□ 1.85
PDCD2-202ENST00000392090 STK32BQ9NY57 414 aa26.62■■□□□ 1.85
PDCD2-202ENST00000392090 LRP5O75197 1615 aa26.61■■□□□ 1.85
PDCD2-202ENST00000392090 CYP27B1O15528 508 aa26.61■■□□□ 1.85
PDCD2-202ENST00000392090 CNGB1Q14028 1251 aaPredicted RBP26.61■■□□□ 1.85
PDCD2-202ENST00000392090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.59■■□□□ 1.85
PDCD2-202ENST00000392090 IGSF1Q8N6C5 1336 aa26.59■■□□□ 1.85
PDCD2-202ENST00000392090 PKD1L3Q7Z443 1732 aa26.59■■□□□ 1.85
PDCD2-202ENST00000392090 MTHFSP49914 203 aa26.56■■□□□ 1.84
PDCD2-202ENST00000392090 SLC15A2Q16348 729 aa26.56■■□□□ 1.84
PDCD2-202ENST00000392090 SLC27A3Q5K4L6 730 aa26.55■■□□□ 1.84
PDCD2-202ENST00000392090 NPC1L1Q9UHC9 1359 aa26.55■■□□□ 1.84
PDCD2-202ENST00000392090 MPRIPQ6WCQ1 1025 aa26.54■■□□□ 1.84
PDCD2-202ENST00000392090 LRRC4BQ9NT99 713 aa26.54■■□□□ 1.84
PDCD2-202ENST00000392090 IFNL2Q8IZJ0 200 aa26.53■■□□□ 1.84
PDCD2-202ENST00000392090 IL13P35225 146 aa26.52■■□□□ 1.84
PDCD2-202ENST00000392090 NKX1-1Q15270 411 aaPredicted RBP26.52■■□□□ 1.84
PDCD2-202ENST00000392090 PLEKHG2Q9H7P9 1386 aa26.51■■□□□ 1.83
PDCD2-202ENST00000392090 SULT6B1Q6IMI4 303 aa26.51■■□□□ 1.83
PDCD2-202ENST00000392090 SPON1Q9HCB6 807 aa26.51■■□□□ 1.83
PDCD2-202ENST00000392090 PHKG2P15735 406 aa26.5■■□□□ 1.83
PDCD2-202ENST00000392090 PLEKHO1Q53GL0 409 aaPredicted RBP26.5■■□□□ 1.83
PDCD2-202ENST00000392090 AEBP1Q8IUX7 1158 aa26.5■■□□□ 1.83
PDCD2-202ENST00000392090 KCNQ4P56696 695 aa26.49■■□□□ 1.83
PDCD2-202ENST00000392090 CCNL1Q9UK58 526 aaPredicted RBP26.49■■□□□ 1.83
PDCD2-202ENST00000392090 AMOTQ4VCS5 1084 aa26.48■■□□□ 1.83
PDCD2-202ENST00000392090 PDGFDQ9GZP0 370 aaPredicted RBP26.48■■□□□ 1.83
PDCD2-202ENST00000392090 ITGB4P16144 1822 aa26.47■■□□□ 1.83
PDCD2-202ENST00000392090 LY75O60449 1722 aa26.47■■□□□ 1.83
PDCD2-202ENST00000392090 TOGARAM1Q9Y4F4 1720 aa26.47■■□□□ 1.83
PDCD2-202ENST00000392090 PAPPAQ13219 1627 aa26.47■■□□□ 1.83
PDCD2-202ENST00000392090 DIAPH1O60610 1272 aaKnown RBP26.46■■□□□ 1.83
PDCD2-202ENST00000392090 ZBTB7AO95365 584 aa26.45■■□□□ 1.82
PDCD2-202ENST00000392090 ZNF827Q17R98 1081 aa26.45■■□□□ 1.82
PDCD2-202ENST00000392090 ZNF530Q6P9A1 599 aaPredicted RBP26.45■■□□□ 1.82
PDCD2-202ENST00000392090 SMARCC1Q92922 1105 aaPredicted RBP26.45■■□□□ 1.82
PDCD2-202ENST00000392090 TMOD3Q9NYL9 352 aa26.45■■□□□ 1.82
PDCD2-202ENST00000392090 PPP1R1BQ9UD71 204 aaPredicted RBP26.45■■□□□ 1.82
PDCD2-202ENST00000392090 CASZ1Q86V15 1759 aa26.45■■□□□ 1.82
PDCD2-202ENST00000392090 HSP90AB1P08238 724 aaKnown RBP26.44■■□□□ 1.82
PDCD2-202ENST00000392090 PIGBQ92521 554 aa26.44■■□□□ 1.82
PDCD2-202ENST00000392090 PALLDQ8WX93 1383 aa26.44■■□□□ 1.82
PDCD2-202ENST00000392090 AKT1S1Q96B36 256 aa26.43■■□□□ 1.82
PDCD2-202ENST00000392090 KDRP35968 1356 aa26.43■■□□□ 1.82
PDCD2-202ENST00000392090 C1orf141Q5JVX7 400 aa26.42■■□□□ 1.82
PDCD2-202ENST00000392090 TFCP2L1Q9NZI6 479 aa26.42■■□□□ 1.82
PDCD2-202ENST00000392090 HMOX1P09601 288 aa26.4■■□□□ 1.82
PDCD2-202ENST00000392090 HMGB2P26583 209 aaKnown RBP26.4■■□□□ 1.82
PDCD2-202ENST00000392090 DCAF5Q96JK2 942 aa26.4■■□□□ 1.82
PDCD2-202ENST00000392090 ATF5Q9Y2D1 282 aaPredicted RBP26.4■■□□□ 1.82
PDCD2-202ENST00000392090 MTFR1LQ9H019 292 aa26.38■■□□□ 1.81
PDCD2-202ENST00000392090 ERVV-2B6SEH9 535 aa26.37■■□□□ 1.81
PDCD2-202ENST00000392090 CFAP53Q96M91 514 aa26.37■■□□□ 1.81
PDCD2-202ENST00000392090 U2SURPO15042 1029 aaKnown RBP26.36■■□□□ 1.81
PDCD2-202ENST00000392090 ASAP1Q9ULH1 1129 aa26.36■■□□□ 1.81
PDCD2-202ENST00000392090 CABP4P57796 275 aa26.34■■□□□ 1.81
PDCD2-202ENST00000392090 PNPLA7Q6ZV29 1317 aa26.34■■□□□ 1.81
PDCD2-202ENST00000392090 C5P01031 1676 aa26.33■■□□□ 1.81
PDCD2-202ENST00000392090 COL3A1P02461 1466 aaPredicted RBP26.32■■□□□ 1.8
PDCD2-202ENST00000392090 QSER1Q2KHR3 1735 aa26.32■■□□□ 1.8
PDCD2-202ENST00000392090 LOC102724428A0A0B4J2F2 783 aa26.32■■□□□ 1.8
PDCD2-202ENST00000392090 PPP2R1AP30153 589 aa26.32■■□□□ 1.8
PDCD2-202ENST00000392090 PTGER2P43116 358 aa26.32■■□□□ 1.8
PDCD2-202ENST00000392090 SIK1P57059 783 aa26.32■■□□□ 1.8
PDCD2-202ENST00000392090 KDM6AO15550 1401 aaPredicted RBP26.31■■□□□ 1.8
PDCD2-202ENST00000392090 MSH5O43196 834 aa26.31■■□□□ 1.8
PDCD2-202ENST00000392090 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
PDCD2-202ENST00000392090 SLC16A10Q8TF71 515 aa26.31■■□□□ 1.8
PDCD2-202ENST00000392090 ATG3Q9NT62 314 aa26.31■■□□□ 1.8
PDCD2-202ENST00000392090 TUBGCP6Q96RT7 1819 aa26.3■■□□□ 1.8
PDCD2-202ENST00000392090 TAF1LQ8IZX4 1826 aa26.29■■□□□ 1.8
PDCD2-202ENST00000392090 ATP6V1AP38606 617 aa26.28■■□□□ 1.8
PDCD2-202ENST00000392090 AK7Q96M32 723 aa26.28■■□□□ 1.8
PDCD2-202ENST00000392090 NUDCQ9Y266 331 aa26.27■■□□□ 1.8
PDCD2-202ENST00000392090 MTHFSDQ2M296 383 aaKnown RBP26.26■■□□□ 1.79
PDCD2-202ENST00000392090 NFATC2IPQ8NCF5 419 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms