RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
ZNF541-203ENST00000391901 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
ZNF541-203ENST00000391901 PDE4CQ08493 712 aa17.31■□□□□ 0.36
ZNF541-203ENST00000391901 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
ZNF541-203ENST00000391901 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
ZNF541-203ENST00000391901 MBD3O95983 291 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 MX1P20591 662 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 PDCP20941 246 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 FLIIQ13045 1269 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 PCDHB15Q9Y5E8 787 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 STK3Q13188 491 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
ZNF541-203ENST00000391901 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
ZNF541-203ENST00000391901 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
ZNF541-203ENST00000391901 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
ZNF541-203ENST00000391901 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 KIF1BPQ96EK5 621 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
ZNF541-203ENST00000391901 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
ZNF541-203ENST00000391901 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 TTC39AQ5SRH9 613 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 UPF3BQ9BZI7 483 aaKnown RBP17.29■□□□□ 0.36
ZNF541-203ENST00000391901 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 SDF4Q9BRK5 362 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 IL16Q14005 1332 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
ZNF541-203ENST00000391901 CEP126Q9P2H0 1117 aa17.28■□□□□ 0.36
ZNF541-203ENST00000391901 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
ZNF541-203ENST00000391901 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
ZNF541-203ENST00000391901 CIZ1Q9ULV3 898 aaPredicted RBP17.28■□□□□ 0.36
ZNF541-203ENST00000391901 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
ZNF541-203ENST00000391901 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
ZNF541-203ENST00000391901 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
ZNF541-203ENST00000391901 ARHGEF12Q9NZN5 1544 aa17.27■□□□□ 0.36
ZNF541-203ENST00000391901 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.36
ZNF541-203ENST00000391901 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.35
ZNF541-203ENST00000391901 MTERF4Q7Z6M4 381 aaKnown RBP17.27■□□□□ 0.35
ZNF541-203ENST00000391901 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.35
ZNF541-203ENST00000391901 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.35
ZNF541-203ENST00000391901 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
ZNF541-203ENST00000391901 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
ZNF541-203ENST00000391901 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
ZNF541-203ENST00000391901 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
ZNF541-203ENST00000391901 R3HCC1Q9Y3T6 440 aaKnown RBP17.26■□□□□ 0.35
ZNF541-203ENST00000391901 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
ZNF541-203ENST00000391901 LARP1Q6PKG0 1096 aaKnown RBP17.26■□□□□ 0.35
ZNF541-203ENST00000391901 ZNF592Q92610 1267 aa17.26■□□□□ 0.35
ZNF541-203ENST00000391901 ANXA1P04083 346 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 TPM3P06753 285 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 TEX14Q8IWB6 1497 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
ZNF541-203ENST00000391901 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
ZNF541-203ENST00000391901 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
ZNF541-203ENST00000391901 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 PTPRCP08575 1304 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 MYD88Q99836 296 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
ZNF541-203ENST00000391901 ADGRL2O95490 1459 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 SAMD9Q5K651 1589 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 MPHOSPH8Q99549 860 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 TRIM34Q9BYJ4 488 aa17.24■□□□□ 0.35
ZNF541-203ENST00000391901 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
ZNF541-203ENST00000391901 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
ZNF541-203ENST00000391901 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
ZNF541-203ENST00000391901 LARP1BQ659C4 914 aaKnown RBP17.23■□□□□ 0.35
ZNF541-203ENST00000391901 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
ZNF541-203ENST00000391901 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
ZNF541-203ENST00000391901 UHRF1BP1Q6BDS2 1440 aa17.23■□□□□ 0.35
ZNF541-203ENST00000391901 RLBP1P12271 317 aa17.22■□□□□ 0.35
ZNF541-203ENST00000391901 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
ZNF541-203ENST00000391901 PDRG1Q9NUG6 133 aa17.22■□□□□ 0.35
ZNF541-203ENST00000391901 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
ZNF541-203ENST00000391901 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
ZNF541-203ENST00000391901 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
ZNF541-203ENST00000391901 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
ZNF541-203ENST00000391901 TSR1Q2NL82 804 aaKnown RBP17.22■□□□□ 0.35
ZNF541-203ENST00000391901 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
ZNF541-203ENST00000391901 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.35
ZNF541-203ENST00000391901 HOOK1Q9UJC3 728 aaKnown RBP17.22■□□□□ 0.35
ZNF541-203ENST00000391901 CCDC8Q9H0W5 538 aaPredicted RBP17.21■□□□□ 0.35
ZNF541-203ENST00000391901 ESPNB1AK53 854 aa17.21■□□□□ 0.35
ZNF541-203ENST00000391901 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
ZNF541-203ENST00000391901 MEIS3Q99687 375 aa17.21■□□□□ 0.35
ZNF541-203ENST00000391901 A0A1W2PP64 1363 aa17.21■□□□□ 0.35
ZNF541-203ENST00000391901 TPM1P09493 284 aa17.21■□□□□ 0.34
ZNF541-203ENST00000391901 BMP2KLQ5H9B9 411 aa17.21■□□□□ 0.34
ZNF541-203ENST00000391901 TSHZ3Q63HK5 1081 aa17.21■□□□□ 0.34
ZNF541-203ENST00000391901 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.34
ZNF541-203ENST00000391901 COL17A1Q9UMD9 1497 aaPredicted RBP17.21■□□□□ 0.34
ZNF541-203ENST00000391901 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
ZNF541-203ENST00000391901 KINO60870 393 aaKnown RBP17.2■□□□□ 0.34
ZNF541-203ENST00000391901 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms