RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 GJD4Q96KN9 370 aaPredicted RBP2.96□□□□□ -1.94
SNORD28B-201ENST00000390993 NSFL1CQ9UNZ2 370 aaKnown RBP2.96□□□□□ -1.94
SNORD28B-201ENST00000390993 RNF225M0QZC1 329 aaPredicted RBP2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 GNRH1P01148 92 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 ITGA6P23229 1130 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 ABL2P42684 1182 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 CTSOP43234 321 aaPredicted RBP2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 ERVK-9P63128 1117 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 USP4Q13107 963 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 ESCO1Q5FWF5 840 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 PRICKLE2Q7Z3G6 844 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 RNF135Q8IUD6 432 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 CCDC155Q8N6L0 562 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 MTMR14Q8NCE2 650 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 RNF217Q8TC41 542 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 TRERF1Q96PN7 1200 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 OCSTAMPQ9BR26 566 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 SNRKQ9NRH2 765 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 DOLKQ9UPQ8 538 aa2.95□□□□□ -1.94
SNORD28B-201ENST00000390993 A0A1W2PRU2 124 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 LILRA1O75019 489 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 RNF144AP50876 292 aaPredicted RBP2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 MAP3K10Q02779 954 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 FLIIQ13045 1269 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 SEMA3FQ13275 785 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 GNASQ5JWF2 1037 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 RIPOR1Q6ZS17 1223 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 NANOS1Q8WY41 292 aaKnown RBP2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 ENAMQ9NRM1 1142 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 CEP126Q9P2H0 1117 aa2.94□□□□□ -1.94
SNORD28B-201ENST00000390993 ERBB4Q15303 1308 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 SLC35F4A4IF30 521 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 CSB-PGBD3P0DP91 1061 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 ADD1P35611 737 aaKnown RBP2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 CLN3Q13286 438 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 MAP7D1Q3KQU3 841 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 WDR44Q5JSH3 913 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 TMEM214Q6NUQ4 689 aaKnown RBP2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 TAS1R3Q7RTX0 852 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 PGBD3Q8N328 593 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 VWA5B2Q8N398 1253 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 ZSCAN10Q96SZ4 725 aaPredicted RBP2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 GAS2L1Q99501 681 aaPredicted RBP2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 TBC1D2BQ9UPU7 963 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 PHF24Q9UPV7 400 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 DYRK1BQ9Y463 629 aa2.93□□□□□ -1.94
SNORD28B-201ENST00000390993 WASLO00401 505 aaPredicted RBP2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 RHOQP17081 205 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 MARSP56192 900 aaKnown RBP2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 OXLD1Q5BKU9 147 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 FOXD4L5Q5VV16 416 aaPredicted RBP2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 TRIM22Q8IYM9 498 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 SVOPQ8N4V2 548 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 CNKSR1Q969H4 720 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 CNTNAP3BQ96NU0 1288 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 ESYT1Q9BSJ8 1104 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 COL25A1Q9BXS0 654 aaPredicted RBP2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 CNTNAP3Q9BZ76 1288 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 GDPD2Q9HCC8 539 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 ARHGEF10LQ9HCE6 1279 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 TIMMDC1Q9NPL8 285 aa2.92□□□□□ -1.94
SNORD28B-201ENST00000390993 A0A1B0GTH6 734 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 SPATA31C2B4DYI2 1134 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 TRAK2O60296 914 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 LZTS3O60299 673 aaPredicted RBP2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 F11P03951 625 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 UBTFP17480 764 aaKnown RBP2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 POU4F2Q12837 409 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 EML3Q32P44 896 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 EFHC2Q5JST6 749 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 NBPF10Q6P3W6 841 aaKnown RBP2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 PODNQ7Z5L7 613 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 NBPF15Q8N660 670 aa2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 RBM19Q9Y4C8 960 aaKnown RBP2.91□□□□□ -1.94
SNORD28B-201ENST00000390993 BACH1O14867 736 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 SCTRP47872 440 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 CENPCQ03188 943 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 SRSF11Q05519 484 aaKnown RBP2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 PSME1Q06323 249 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 VAC14Q08AM6 782 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 MCM6Q14566 821 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 LBRQ14739 615 aaKnown RBP2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 TLR1Q15399 786 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 TBC1D9Q6ZT07 1266 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 PLPP7Q8NBV4 271 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 SCARF2Q96GP6 870 aaPredicted RBP2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 XAGE2Q96GT9 111 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 GRIP2Q9C0E4 1043 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 NUCKS1Q9H1E3 243 aaKnown RBP2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 OSBPL3Q9H4L5 887 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 RAB6BQ9NRW1 208 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 NOD1Q9Y239 953 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 CHMP3Q9Y3E7 222 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 GJA3Q9Y6H8 435 aa2.9□□□□□ -1.95
SNORD28B-201ENST00000390993 SENP3-EIF4A1A0A087X0R7 540 aa2.89□□□□□ -1.95
SNORD28B-201ENST00000390993 PHF20L1A8MW92 1017 aa2.89□□□□□ -1.95
SNORD28B-201ENST00000390993 PIK3R2O00459 728 aa2.89□□□□□ -1.95
SNORD28B-201ENST00000390993 ADAMTS2O95450 1211 aa2.89□□□□□ -1.95
SNORD28B-201ENST00000390993 PRKCSHP14314 528 aaPredicted RBP2.89□□□□□ -1.95
SNORD28B-201ENST00000390993 TATP17735 454 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms