RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
IGHV3-53-201ENST00000390627 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
IGHV3-53-201ENST00000390627 COL3A1P02461 1466 aaPredicted RBP20.24■□□□□ 0.83
IGHV3-53-201ENST00000390627 DDX54Q8TDD1 881 aaKnown RBP20.23■□□□□ 0.83
IGHV3-53-201ENST00000390627 TRIM37O94972 964 aa20.22■□□□□ 0.83
IGHV3-53-201ENST00000390627 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
IGHV3-53-201ENST00000390627 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
IGHV3-53-201ENST00000390627 PKD1L3Q7Z443 1732 aa20.22■□□□□ 0.83
IGHV3-53-201ENST00000390627 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
IGHV3-53-201ENST00000390627 KDRP35968 1356 aa20.21■□□□□ 0.83
IGHV3-53-201ENST00000390627 SULT6B1Q6IMI4 303 aa20.21■□□□□ 0.83
IGHV3-53-201ENST00000390627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
IGHV3-53-201ENST00000390627 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
IGHV3-53-201ENST00000390627 TNS1Q9HBL0 1735 aaKnown RBP20.2■□□□□ 0.82
IGHV3-53-201ENST00000390627 BAG6P46379 1132 aa20.19■□□□□ 0.82
IGHV3-53-201ENST00000390627 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
IGHV3-53-201ENST00000390627 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
IGHV3-53-201ENST00000390627 SBF2Q86WG5 1849 aa20.18■□□□□ 0.82
IGHV3-53-201ENST00000390627 MYBBP1AQ9BQG0 1328 aaKnown RBP20.18■□□□□ 0.82
IGHV3-53-201ENST00000390627 U2SURPO15042 1029 aaKnown RBP20.17■□□□□ 0.82
IGHV3-53-201ENST00000390627 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
IGHV3-53-201ENST00000390627 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
IGHV3-53-201ENST00000390627 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
IGHV3-53-201ENST00000390627 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
IGHV3-53-201ENST00000390627 APBA3O96018 575 aa20.15■□□□□ 0.82
IGHV3-53-201ENST00000390627 HMOX1P09601 288 aa20.15■□□□□ 0.82
IGHV3-53-201ENST00000390627 DEFB132Q7Z7B7 95 aa20.15■□□□□ 0.82
IGHV3-53-201ENST00000390627 PRKRIP1Q9H875 184 aaPredicted RBP20.15■□□□□ 0.82
IGHV3-53-201ENST00000390627 CYP27B1O15528 508 aa20.14■□□□□ 0.81
IGHV3-53-201ENST00000390627 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
IGHV3-53-201ENST00000390627 IFNL2Q8IZJ0 200 aa20.13■□□□□ 0.81
IGHV3-53-201ENST00000390627 DOT1LQ8TEK3 1739 aa20.12■□□□□ 0.81
IGHV3-53-201ENST00000390627 PHKG2P15735 406 aa20.11■□□□□ 0.81
IGHV3-53-201ENST00000390627 EN1Q05925 392 aaPredicted RBP20.11■□□□□ 0.81
IGHV3-53-201ENST00000390627 KCNQ2O43526 872 aa20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 ZNF530Q6P9A1 599 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 KAT6BQ8WYB5 2073 aa20.1■□□□□ 0.81
IGHV3-53-201ENST00000390627 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
IGHV3-53-201ENST00000390627 PTF1AQ7RTS3 328 aa20.09■□□□□ 0.81
IGHV3-53-201ENST00000390627 SYTL4Q96C24 671 aaPredicted RBP20.09■□□□□ 0.81
IGHV3-53-201ENST00000390627 RGPD3A6NKT7 1758 aaPredicted RBP20.08■□□□□ 0.81
IGHV3-53-201ENST00000390627 RGPD4Q7Z3J3 1758 aa20.08■□□□□ 0.81
IGHV3-53-201ENST00000390627 PLSCR1O15162 318 aa20.08■□□□□ 0.81
IGHV3-53-201ENST00000390627 PRIM1P49642 420 aaKnown RBP20.08■□□□□ 0.81
IGHV3-53-201ENST00000390627 CAMKK2Q96RR4 588 aa20.07■□□□□ 0.8
IGHV3-53-201ENST00000390627 BTAF1O14981 1849 aa20.06■□□□□ 0.8
IGHV3-53-201ENST00000390627 ANP32CO43423 234 aa20.06■□□□□ 0.8
IGHV3-53-201ENST00000390627 EZH2Q15910 746 aaKnown RBP20.06■□□□□ 0.8
IGHV3-53-201ENST00000390627 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
IGHV3-53-201ENST00000390627 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
IGHV3-53-201ENST00000390627 FCHSD2O94868 740 aa20.05■□□□□ 0.8
IGHV3-53-201ENST00000390627 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
IGHV3-53-201ENST00000390627 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
IGHV3-53-201ENST00000390627 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
IGHV3-53-201ENST00000390627 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
IGHV3-53-201ENST00000390627 MTHFSDQ2M296 383 aaKnown RBP20.03■□□□□ 0.8
IGHV3-53-201ENST00000390627 RREB1Q92766 1687 aa20.03■□□□□ 0.8
IGHV3-53-201ENST00000390627 NEFMP07197 916 aa20.02■□□□□ 0.8
IGHV3-53-201ENST00000390627 PNNQ9H307 717 aaKnown RBP20.02■□□□□ 0.8
IGHV3-53-201ENST00000390627 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.79
IGHV3-53-201ENST00000390627 MPRIPQ6WCQ1 1025 aa20.01■□□□□ 0.79
IGHV3-53-201ENST00000390627 TMOD3Q9NYL9 352 aa20.01■□□□□ 0.79
IGHV3-53-201ENST00000390627 ITGB4P16144 1822 aa20■□□□□ 0.79
IGHV3-53-201ENST00000390627 ERVV-2B6SEH9 535 aa20■□□□□ 0.79
IGHV3-53-201ENST00000390627 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
IGHV3-53-201ENST00000390627 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
IGHV3-53-201ENST00000390627 TXNRD1Q16881 649 aa19.98■□□□□ 0.79
IGHV3-53-201ENST00000390627 PIGBQ92521 554 aa19.98■□□□□ 0.79
IGHV3-53-201ENST00000390627 PHACTR3Q96KR7 559 aa19.98■□□□□ 0.79
IGHV3-53-201ENST00000390627 NUP188Q5SRE5 1749 aa19.98■□□□□ 0.79
IGHV3-53-201ENST00000390627 CABP4P57796 275 aa19.97■□□□□ 0.79
IGHV3-53-201ENST00000390627 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
IGHV3-53-201ENST00000390627 SCN11AQ9UI33 1791 aa19.96■□□□□ 0.79
IGHV3-53-201ENST00000390627 GNAT3A8MTJ3 354 aa19.96■□□□□ 0.79
IGHV3-53-201ENST00000390627 SLC27A3Q5K4L6 730 aa19.96■□□□□ 0.79
IGHV3-53-201ENST00000390627 MAPK8IP3Q9UPT6 1336 aa19.96■□□□□ 0.79
IGHV3-53-201ENST00000390627 RNMTO43148 476 aaKnown RBP19.95■□□□□ 0.78
IGHV3-53-201ENST00000390627 NBPF14Q5TI25 921 aa19.95■□□□□ 0.78
IGHV3-53-201ENST00000390627 PROM2Q8N271 834 aa19.95■□□□□ 0.78
IGHV3-53-201ENST00000390627 PALLDQ8WX93 1383 aa19.95■□□□□ 0.78
IGHV3-53-201ENST00000390627 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
IGHV3-53-201ENST00000390627 MRC1P22897 1456 aa19.94■□□□□ 0.78
IGHV3-53-201ENST00000390627 LY75O60449 1722 aa19.94■□□□□ 0.78
IGHV3-53-201ENST00000390627 PLEKHF1Q96S99 279 aa19.94■□□□□ 0.78
IGHV3-53-201ENST00000390627 SLC52A2Q9HAB3 445 aa19.92■□□□□ 0.78
IGHV3-53-201ENST00000390627 LGR6Q9HBX8 967 aa19.92■□□□□ 0.78
IGHV3-53-201ENST00000390627 VIRMAQ69YN4 1812 aaKnown RBP19.91■□□□□ 0.78
IGHV3-53-201ENST00000390627 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
IGHV3-53-201ENST00000390627 NFATC2IPQ8NCF5 419 aa19.91■□□□□ 0.78
IGHV3-53-201ENST00000390627 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
IGHV3-53-201ENST00000390627 CCNL1Q9UK58 526 aaPredicted RBP19.91■□□□□ 0.78
IGHV3-53-201ENST00000390627 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
IGHV3-53-201ENST00000390627 ASAP1Q9ULH1 1129 aa19.9■□□□□ 0.78
IGHV3-53-201ENST00000390627 HTATSF1O43719 755 aaKnown RBP19.89■□□□□ 0.77
IGHV3-53-201ENST00000390627 NFE2L2Q16236 605 aa19.89■□□□□ 0.77
IGHV3-53-201ENST00000390627 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms