RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 USHBP1Q8N6Y0 703 aa15.62■□□□□ 0.09
IGHV4-28-201ENST00000390612 PKD1L3Q7Z443 1732 aa15.62■□□□□ 0.09
IGHV4-28-201ENST00000390612 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
IGHV4-28-201ENST00000390612 KCNQ2O43526 872 aa15.61■□□□□ 0.09
IGHV4-28-201ENST00000390612 PROM2Q8N271 834 aa15.61■□□□□ 0.09
IGHV4-28-201ENST00000390612 ZCRB1Q8TBF4 217 aaKnown RBP15.61■□□□□ 0.09
IGHV4-28-201ENST00000390612 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
IGHV4-28-201ENST00000390612 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
IGHV4-28-201ENST00000390612 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
IGHV4-28-201ENST00000390612 EYA1Q99502 592 aa15.6■□□□□ 0.09
IGHV4-28-201ENST00000390612 EIF4A2Q14240 407 aaKnown RBP15.59■□□□□ 0.09
IGHV4-28-201ENST00000390612 RAPGEF4Q8WZA2 1011 aa15.59■□□□□ 0.09
IGHV4-28-201ENST00000390612 DOT1LQ8TEK3 1739 aa15.58■□□□□ 0.08
IGHV4-28-201ENST00000390612 TATP17735 454 aaPredicted RBP15.58■□□□□ 0.08
IGHV4-28-201ENST00000390612 DDX54Q8TDD1 881 aaKnown RBP15.58■□□□□ 0.08
IGHV4-28-201ENST00000390612 ACSBG1Q96GR2 724 aa15.57■□□□□ 0.08
IGHV4-28-201ENST00000390612 IGSF1Q8N6C5 1336 aa15.56■□□□□ 0.08
IGHV4-28-201ENST00000390612 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
IGHV4-28-201ENST00000390612 ITGB4P16144 1822 aa15.56■□□□□ 0.08
IGHV4-28-201ENST00000390612 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
IGHV4-28-201ENST00000390612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.55■□□□□ 0.08
IGHV4-28-201ENST00000390612 LRP5O75197 1615 aa15.54■□□□□ 0.08
IGHV4-28-201ENST00000390612 CYP27B1O15528 508 aa15.54■□□□□ 0.08
IGHV4-28-201ENST00000390612 R3HDM1Q15032 1099 aaKnown RBP15.54■□□□□ 0.08
IGHV4-28-201ENST00000390612 TXNRD1Q16881 649 aa15.54■□□□□ 0.08
IGHV4-28-201ENST00000390612 LY75O60449 1722 aa15.54■□□□□ 0.08
IGHV4-28-201ENST00000390612 PCDH11XQ9BZA7 1347 aa15.53■□□□□ 0.08
IGHV4-28-201ENST00000390612 PCDH11YQ9BZA8 1340 aa15.53■□□□□ 0.08
IGHV4-28-201ENST00000390612 NKX1-1Q15270 411 aaPredicted RBP15.53■□□□□ 0.08
IGHV4-28-201ENST00000390612 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
IGHV4-28-201ENST00000390612 IL13P35225 146 aa15.52■□□□□ 0.08
IGHV4-28-201ENST00000390612 PRIM1P49642 420 aaKnown RBP15.52■□□□□ 0.08
IGHV4-28-201ENST00000390612 NBPF14Q5TI25 921 aa15.52■□□□□ 0.08
IGHV4-28-201ENST00000390612 PAPPAQ13219 1627 aa15.52■□□□□ 0.08
IGHV4-28-201ENST00000390612 MTHFSP49914 203 aa15.51■□□□□ 0.07
IGHV4-28-201ENST00000390612 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
IGHV4-28-201ENST00000390612 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
IGHV4-28-201ENST00000390612 KDRP35968 1356 aa15.5■□□□□ 0.07
IGHV4-28-201ENST00000390612 SPG7Q9UQ90 795 aa15.5■□□□□ 0.07
IGHV4-28-201ENST00000390612 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
IGHV4-28-201ENST00000390612 LRRC4BQ9NT99 713 aa15.48■□□□□ 0.07
IGHV4-28-201ENST00000390612 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
IGHV4-28-201ENST00000390612 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
IGHV4-28-201ENST00000390612 QSER1Q2KHR3 1735 aa15.46■□□□□ 0.07
IGHV4-28-201ENST00000390612 TAF1LQ8IZX4 1826 aa15.46■□□□□ 0.07
IGHV4-28-201ENST00000390612 PHKG2P15735 406 aa15.46■□□□□ 0.07
IGHV4-28-201ENST00000390612 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
IGHV4-28-201ENST00000390612 SLC15A2Q16348 729 aa15.45■□□□□ 0.06
IGHV4-28-201ENST00000390612 IFNL2Q8IZJ0 200 aa15.45■□□□□ 0.06
IGHV4-28-201ENST00000390612 SYTL4Q96C24 671 aaPredicted RBP15.45■□□□□ 0.06
IGHV4-28-201ENST00000390612 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
IGHV4-28-201ENST00000390612 TUBGCP6Q96RT7 1819 aa15.45■□□□□ 0.06
IGHV4-28-201ENST00000390612 SULT6B1Q6IMI4 303 aa15.44■□□□□ 0.06
IGHV4-28-201ENST00000390612 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
IGHV4-28-201ENST00000390612 PLEKHO1Q53GL0 409 aaPredicted RBP15.43■□□□□ 0.06
IGHV4-28-201ENST00000390612 SCN11AQ9UI33 1791 aa15.42■□□□□ 0.06
IGHV4-28-201ENST00000390612 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
IGHV4-28-201ENST00000390612 PIGBQ92521 554 aa15.42■□□□□ 0.06
IGHV4-28-201ENST00000390612 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
IGHV4-28-201ENST00000390612 PDGFDQ9GZP0 370 aaPredicted RBP15.42■□□□□ 0.06
IGHV4-28-201ENST00000390612 STK32BQ9NY57 414 aa15.42■□□□□ 0.06
IGHV4-28-201ENST00000390612 ZNF827Q17R98 1081 aa15.41■□□□□ 0.06
IGHV4-28-201ENST00000390612 MPRIPQ6WCQ1 1025 aa15.41■□□□□ 0.06
IGHV4-28-201ENST00000390612 C5P01031 1676 aa15.4■□□□□ 0.06
IGHV4-28-201ENST00000390612 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
IGHV4-28-201ENST00000390612 COL24A1Q17RW2 1714 aa15.4■□□□□ 0.06
IGHV4-28-201ENST00000390612 ERVV-2B6SEH9 535 aa15.39■□□□□ 0.05
IGHV4-28-201ENST00000390612 HSP90AB1P08238 724 aaKnown RBP15.39■□□□□ 0.05
IGHV4-28-201ENST00000390612 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
IGHV4-28-201ENST00000390612 KCNQ4P56696 695 aa15.39■□□□□ 0.05
IGHV4-28-201ENST00000390612 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
IGHV4-28-201ENST00000390612 DCAF5Q96JK2 942 aa15.39■□□□□ 0.05
IGHV4-28-201ENST00000390612 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
IGHV4-28-201ENST00000390612 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
IGHV4-28-201ENST00000390612 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
IGHV4-28-201ENST00000390612 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
IGHV4-28-201ENST00000390612 ZNF831Q5JPB2 1677 aa15.38■□□□□ 0.05
IGHV4-28-201ENST00000390612 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
IGHV4-28-201ENST00000390612 HMOX1P09601 288 aa15.37■□□□□ 0.05
IGHV4-28-201ENST00000390612 SPON1Q9HCB6 807 aa15.37■□□□□ 0.05
IGHV4-28-201ENST00000390612 TMOD3Q9NYL9 352 aa15.37■□□□□ 0.05
IGHV4-28-201ENST00000390612 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
IGHV4-28-201ENST00000390612 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
IGHV4-28-201ENST00000390612 UBR3Q6ZT12 1888 aa15.35■□□□□ 0.05
IGHV4-28-201ENST00000390612 PTGER2P43116 358 aa15.35■□□□□ 0.05
IGHV4-28-201ENST00000390612 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
IGHV4-28-201ENST00000390612 PNPLA7Q6ZV29 1317 aa15.35■□□□□ 0.05
IGHV4-28-201ENST00000390612 HMGB2P26583 209 aaKnown RBP15.34■□□□□ 0.05
IGHV4-28-201ENST00000390612 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
IGHV4-28-201ENST00000390612 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
IGHV4-28-201ENST00000390612 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
IGHV4-28-201ENST00000390612 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 ZBTB7AO95365 584 aa15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 SIK1P57059 783 aa15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 MTFR1LQ9H019 292 aa15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 MYH14Q7Z406 1995 aaKnown RBP15.33■□□□□ 0.04
IGHV4-28-201ENST00000390612 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
IGHV4-28-201ENST00000390612 SLC16A10Q8TF71 515 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms