RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 SRCAPQ6ZRS2 3230 aa9.93□□□□□ -0.82
TRAV38-1-201ENST00000390464 PLSCR1O15162 318 aa9.93□□□□□ -0.82
TRAV38-1-201ENST00000390464 CASZ1Q86V15 1759 aa9.93□□□□□ -0.82
TRAV38-1-201ENST00000390464 SHANK3Q9BYB0 1731 aa9.93□□□□□ -0.82
TRAV38-1-201ENST00000390464 MARCH10Q8NA82 808 aaPredicted RBP9.92□□□□□ -0.82
TRAV38-1-201ENST00000390464 IP6K1Q92551 441 aa9.92□□□□□ -0.82
TRAV38-1-201ENST00000390464 POLR3GLQ9BT43 218 aa9.92□□□□□ -0.82
TRAV38-1-201ENST00000390464 STK32BQ9NY57 414 aa9.92□□□□□ -0.82
TRAV38-1-201ENST00000390464 QSER1Q2KHR3 1735 aa9.92□□□□□ -0.82
TRAV38-1-201ENST00000390464 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
TRAV38-1-201ENST00000390464 SPON1Q9HCB6 807 aa9.91□□□□□ -0.82
TRAV38-1-201ENST00000390464 MAP3K19Q56UN5 1328 aa9.9□□□□□ -0.82
TRAV38-1-201ENST00000390464 HOXC9P31274 260 aa9.9□□□□□ -0.82
TRAV38-1-201ENST00000390464 GGNBP2Q9H3C7 697 aa9.9□□□□□ -0.82
TRAV38-1-201ENST00000390464 ITGB4P16144 1822 aa9.9□□□□□ -0.82
TRAV38-1-201ENST00000390464 LY75O60449 1722 aa9.9□□□□□ -0.83
TRAV38-1-201ENST00000390464 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.83
TRAV38-1-201ENST00000390464 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
TRAV38-1-201ENST00000390464 RAPGEF4Q8WZA2 1011 aa9.89□□□□□ -0.83
TRAV38-1-201ENST00000390464 ACSBG1Q96GR2 724 aa9.89□□□□□ -0.83
TRAV38-1-201ENST00000390464 TUBGCP6Q96RT7 1819 aa9.89□□□□□ -0.83
TRAV38-1-201ENST00000390464 FLT4P35916 1363 aa9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 CGNL1Q0VF96 1302 aa9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 CHD4Q14839 1912 aa9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 KCNQ2O43526 872 aa9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 TXNRD1Q16881 649 aa9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 SYTL4Q96C24 671 aaPredicted RBP9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
TRAV38-1-201ENST00000390464 PKD1L3Q7Z443 1732 aa9.87□□□□□ -0.83
TRAV38-1-201ENST00000390464 C5P01031 1676 aa9.87□□□□□ -0.83
TRAV38-1-201ENST00000390464 EIF4G2P78344 907 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRAV38-1-201ENST00000390464 RRS1Q15050 365 aaKnown RBP9.87□□□□□ -0.83
TRAV38-1-201ENST00000390464 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 FYB1O15117 783 aa9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 TATP17735 454 aaPredicted RBP9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 MEGF6O75095 1541 aa9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 INSRP06213 1382 aa9.86□□□□□ -0.83
TRAV38-1-201ENST00000390464 PCDH11XQ9BZA7 1347 aa9.85□□□□□ -0.83
TRAV38-1-201ENST00000390464 PCDH11YQ9BZA8 1340 aa9.85□□□□□ -0.83
TRAV38-1-201ENST00000390464 ZCRB1Q8TBF4 217 aaKnown RBP9.85□□□□□ -0.83
TRAV38-1-201ENST00000390464 ZBTB12Q9Y330 459 aaPredicted RBP9.85□□□□□ -0.83
TRAV38-1-201ENST00000390464 SLC15A2Q16348 729 aa9.84□□□□□ -0.83
TRAV38-1-201ENST00000390464 PTF1AQ7RTS3 328 aa9.84□□□□□ -0.83
TRAV38-1-201ENST00000390464 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
TRAV38-1-201ENST00000390464 VIRMAQ69YN4 1812 aaKnown RBP9.84□□□□□ -0.83
TRAV38-1-201ENST00000390464 ZBTB7AO95365 584 aa9.83□□□□□ -0.84
TRAV38-1-201ENST00000390464 SLC27A3Q5K4L6 730 aa9.83□□□□□ -0.84
TRAV38-1-201ENST00000390464 USHBP1Q8N6Y0 703 aa9.83□□□□□ -0.84
TRAV38-1-201ENST00000390464 TOGARAM1Q9Y4F4 1720 aa9.82□□□□□ -0.84
TRAV38-1-201ENST00000390464 FBLN1P23142 703 aa9.82□□□□□ -0.84
TRAV38-1-201ENST00000390464 MTFR1LQ9H019 292 aa9.82□□□□□ -0.84
TRAV38-1-201ENST00000390464 NSD2O96028 1365 aa9.81□□□□□ -0.84
TRAV38-1-201ENST00000390464 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
TRAV38-1-201ENST00000390464 NBPF6Q5VWK0 638 aa9.81□□□□□ -0.84
TRAV38-1-201ENST00000390464 NBPF4Q96M43 638 aa9.81□□□□□ -0.84
TRAV38-1-201ENST00000390464 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
TRAV38-1-201ENST00000390464 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
TRAV38-1-201ENST00000390464 HSPA5P11021 654 aaKnown RBP9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 POLD1P28340 1107 aa9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 PRIM1P49642 420 aaKnown RBP9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 PROM2Q8N271 834 aa9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 CCNL1Q9UK58 526 aaPredicted RBP9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 EMILIN1Q9Y6C2 1016 aa9.8□□□□□ -0.84
TRAV38-1-201ENST00000390464 COL24A1Q17RW2 1714 aa9.79□□□□□ -0.84
TRAV38-1-201ENST00000390464 CARD14Q9BXL6 1004 aa9.79□□□□□ -0.84
TRAV38-1-201ENST00000390464 UBR3Q6ZT12 1888 aa9.79□□□□□ -0.84
TRAV38-1-201ENST00000390464 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
TRAV38-1-201ENST00000390464 C4BP0C0L5 1744 aa9.78□□□□□ -0.84
TRAV38-1-201ENST00000390464 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
TRAV38-1-201ENST00000390464 YY1P25490 414 aa9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 MORC1Q86VD1 984 aa9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 ARXQ96QS3 562 aa9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
TRAV38-1-201ENST00000390464 PALLDQ8WX93 1383 aa9.76□□□□□ -0.85
TRAV38-1-201ENST00000390464 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
TRAV38-1-201ENST00000390464 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
TRAV38-1-201ENST00000390464 PANK3Q9H999 370 aa9.76□□□□□ -0.85
TRAV38-1-201ENST00000390464 PLEKHG2Q9H7P9 1386 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 NCAPD2Q15021 1401 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 FLAD1Q8NFF5 587 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 AK7Q96M32 723 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 FHDC1Q9C0D6 1143 aaPredicted RBP9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 LRRC4BQ9NT99 713 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 TMOD3Q9NYL9 352 aa9.75□□□□□ -0.85
TRAV38-1-201ENST00000390464 HSP90AB1P08238 724 aaKnown RBP9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 PTGER2P43116 358 aa9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 POLKQ9UBT6 870 aa9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 PNPLA7Q6ZV29 1317 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms