RNA–Protein interactions for RNA: ENST00000390433.1

TRAV12-1-201, Transcript of T cell receptor alpha variable 12-1, humanhuman

APPRIS P1 BASIC

Gene TRAV12-1, Length 340 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1-201ENST00000390433 MSL1Q68DK7 614 aa10.22□□□□□ -0.77
TRAV12-1-201ENST00000390433 JMYQ8N9B5 988 aa10.22□□□□□ -0.77
TRAV12-1-201ENST00000390433 PPIP5K1Q6PFW1 1433 aa10.22□□□□□ -0.77
TRAV12-1-201ENST00000390433 ABCC6O95255 1503 aa10.22□□□□□ -0.77
TRAV12-1-201ENST00000390433 SOX12O15370 315 aa10.21□□□□□ -0.77
TRAV12-1-201ENST00000390433 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
TRAV12-1-201ENST00000390433 COL23A1Q86Y22 540 aaPredicted RBP10.21□□□□□ -0.77
TRAV12-1-201ENST00000390433 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.78
TRAV12-1-201ENST00000390433 IL2RBP14784 551 aa10.2□□□□□ -0.78
TRAV12-1-201ENST00000390433 HTRA3P83110 453 aa10.2□□□□□ -0.78
TRAV12-1-201ENST00000390433 KCNH5Q8NCM2 988 aa10.2□□□□□ -0.78
TRAV12-1-201ENST00000390433 WWC3Q9ULE0 1092 aa10.2□□□□□ -0.78
TRAV12-1-201ENST00000390433 WASHC2AQ641Q2 1341 aa10.19□□□□□ -0.78
TRAV12-1-201ENST00000390433 TMF1P82094 1093 aa10.19□□□□□ -0.78
TRAV12-1-201ENST00000390433 LY75O60449 1722 aa10.19□□□□□ -0.78
TRAV12-1-201ENST00000390433 PIK3C2AO00443 1686 aa10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 IGSF1Q8N6C5 1336 aa10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 CDCA8Q53HL2 280 aa10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 SYTL4Q96C24 671 aaPredicted RBP10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 CABP2Q9NPB3 220 aa10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 NLRP2Q9NX02 1062 aa10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
TRAV12-1-201ENST00000390433 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
TRAV12-1-201ENST00000390433 CCNL1Q9UK58 526 aaPredicted RBP10.17□□□□□ -0.78
TRAV12-1-201ENST00000390433 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
TRAV12-1-201ENST00000390433 C16orf71Q8IYS4 520 aaPredicted RBP10.16□□□□□ -0.78
TRAV12-1-201ENST00000390433 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
TRAV12-1-201ENST00000390433 NMRK2Q9NPI5 230 aa10.16□□□□□ -0.78
TRAV12-1-201ENST00000390433 QRICH2Q9H0J4 1663 aa10.15□□□□□ -0.78
TRAV12-1-201ENST00000390433 PRIM1P49642 420 aaKnown RBP10.15□□□□□ -0.78
TRAV12-1-201ENST00000390433 EVC2Q86UK5 1308 aa10.14□□□□□ -0.79
TRAV12-1-201ENST00000390433 FLAD1Q8NFF5 587 aa10.14□□□□□ -0.79
TRAV12-1-201ENST00000390433 PCDH10Q9P2E7 1040 aa10.14□□□□□ -0.79
TRAV12-1-201ENST00000390433 ERBB3P21860 1342 aa10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 TTC21BQ7Z4L5 1316 aa10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 HSPA1AP0DMV8 641 aaKnown RBP10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 HSPA1BP0DMV9 641 aaKnown RBP10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 FSTL1Q12841 308 aa10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 ANKRD36BQ8N2N9 1353 aa10.13□□□□□ -0.79
TRAV12-1-201ENST00000390433 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
TRAV12-1-201ENST00000390433 NFAT5O94916 1531 aa10.12□□□□□ -0.79
TRAV12-1-201ENST00000390433 CICQ96RK0 1608 aaPredicted RBP10.11□□□□□ -0.79
TRAV12-1-201ENST00000390433 ANKRD24Q8TF21 1146 aa10.11□□□□□ -0.79
TRAV12-1-201ENST00000390433 LTN1O94822 1766 aa10.11□□□□□ -0.79
TRAV12-1-201ENST00000390433 TTC21AQ8NDW8 1320 aa10.1□□□□□ -0.79
TRAV12-1-201ENST00000390433 TAF1LQ8IZX4 1826 aa10.1□□□□□ -0.79
TRAV12-1-201ENST00000390433 C5P01031 1676 aa10.1□□□□□ -0.79
TRAV12-1-201ENST00000390433 HMGB2P26583 209 aaKnown RBP10.1□□□□□ -0.79
TRAV12-1-201ENST00000390433 ARHGAP27Q6ZUM4 889 aa10.1□□□□□ -0.79
TRAV12-1-201ENST00000390433 NSD2O96028 1365 aa10.1□□□□□ -0.79
TRAV12-1-201ENST00000390433 PER1O15534 1290 aaPredicted RBP10.09□□□□□ -0.79
TRAV12-1-201ENST00000390433 DDX10Q13206 875 aaKnown RBP10.09□□□□□ -0.79
TRAV12-1-201ENST00000390433 BCS1LQ9Y276 419 aa10.09□□□□□ -0.79
TRAV12-1-201ENST00000390433 USP54Q70EL1 1684 aa10.09□□□□□ -0.79
TRAV12-1-201ENST00000390433 PCNTO95613 3336 aa10.09□□□□□ -0.79
TRAV12-1-201ENST00000390433 DIEXFQ68CQ4 756 aaKnown RBP10.08□□□□□ -0.8
TRAV12-1-201ENST00000390433 N4BP2Q86UW6 1770 aaPredicted RBP10.08□□□□□ -0.8
TRAV12-1-201ENST00000390433 RRAGCQ9HB90 399 aa10.07□□□□□ -0.8
TRAV12-1-201ENST00000390433 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
TRAV12-1-201ENST00000390433 PHF14O94880 888 aa10.06□□□□□ -0.8
TRAV12-1-201ENST00000390433 C9orf131Q5VYM1 1079 aa10.06□□□□□ -0.8
TRAV12-1-201ENST00000390433 SMC1BQ8NDV3 1235 aa10.06□□□□□ -0.8
TRAV12-1-201ENST00000390433 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
TRAV12-1-201ENST00000390433 AK7Q96M32 723 aa10.06□□□□□ -0.8
TRAV12-1-201ENST00000390433 UBR3Q6ZT12 1888 aa10.06□□□□□ -0.8
TRAV12-1-201ENST00000390433 KTN1Q86UP2 1357 aaKnown RBP10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 PLEKHG2Q9H7P9 1386 aa10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 TGFB2P61812 414 aa10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 SLC12A5Q9H2X9 1139 aa10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 PANK3Q9H999 370 aa10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 KCPQ6ZWJ8 1503 aa10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 KIF13BQ9NQT8 1826 aa10.05□□□□□ -0.8
TRAV12-1-201ENST00000390433 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 A0A0G2JLW4 131 aa10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 FCHSD2O94868 740 aa10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 SMIM5Q71RC9 77 aa10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 PKD1L3Q7Z443 1732 aa10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
TRAV12-1-201ENST00000390433 NPC1L1Q9UHC9 1359 aa10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 TNRC6CQ9HCJ0 1690 aaKnown RBP10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 FAM208AQ9UK61 1670 aaKnown RBP10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 AMIGO3Q86WK7 504 aa10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 NSD3Q9BZ95 1437 aa10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 KIAA1551Q9HCM1 1747 aa10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 TOGARAM1Q9Y4F4 1720 aa10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
TRAV12-1-201ENST00000390433 USP31Q70CQ4 1352 aa10.02□□□□□ -0.8
TRAV12-1-201ENST00000390433 PALLDQ8WX93 1383 aa10.02□□□□□ -0.8
TRAV12-1-201ENST00000390433 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 MMP10P09238 476 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 NME9Q86XW9 330 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 IP6K1Q92551 441 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 TERF2IPQ9NYB0 399 aa10.02□□□□□ -0.81
TRAV12-1-201ENST00000390433 CD163L1Q9NR16 1453 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms