RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 PRIM1P49642 420 aaKnown RBP9.17□□□□□ -0.94
TRAV1-2-201ENST00000390423 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
TRAV1-2-201ENST00000390423 KCNH5Q8NCM2 988 aa9.17□□□□□ -0.94
TRAV1-2-201ENST00000390423 DDX54Q8TDD1 881 aaKnown RBP9.17□□□□□ -0.94
TRAV1-2-201ENST00000390423 CCNL1Q9UK58 526 aaPredicted RBP9.17□□□□□ -0.94
TRAV1-2-201ENST00000390423 PCNTO95613 3336 aa9.17□□□□□ -0.94
TRAV1-2-201ENST00000390423 SMIM5Q71RC9 77 aa9.16□□□□□ -0.94
TRAV1-2-201ENST00000390423 AMIGO3Q86WK7 504 aa9.16□□□□□ -0.94
TRAV1-2-201ENST00000390423 LTN1O94822 1766 aa9.16□□□□□ -0.94
TRAV1-2-201ENST00000390423 C5P01031 1676 aa9.16□□□□□ -0.94
TRAV1-2-201ENST00000390423 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
TRAV1-2-201ENST00000390423 ANKRD36BQ8N2N9 1353 aa9.15□□□□□ -0.94
TRAV1-2-201ENST00000390423 TOGARAM1Q9Y4F4 1720 aa9.15□□□□□ -0.94
TRAV1-2-201ENST00000390423 CENPJQ9HC77 1338 aaPredicted RBP9.14□□□□□ -0.95
TRAV1-2-201ENST00000390423 ANKRD24Q8TF21 1146 aa9.14□□□□□ -0.95
TRAV1-2-201ENST00000390423 KIAA1210Q9ULL0 1709 aa9.14□□□□□ -0.95
TRAV1-2-201ENST00000390423 RAB3GAP2Q9H2M9 1393 aa9.13□□□□□ -0.95
TRAV1-2-201ENST00000390423 KIAA1551Q9HCM1 1747 aa9.12□□□□□ -0.95
TRAV1-2-201ENST00000390423 RBM46Q8TBY0 533 aaKnown RBP9.12□□□□□ -0.95
TRAV1-2-201ENST00000390423 TAF1LQ8IZX4 1826 aa9.12□□□□□ -0.95
TRAV1-2-201ENST00000390423 TTC21AQ8NDW8 1320 aa9.11□□□□□ -0.95
TRAV1-2-201ENST00000390423 NME9Q86XW9 330 aa9.11□□□□□ -0.95
TRAV1-2-201ENST00000390423 MON2Q7Z3U7 1717 aa9.11□□□□□ -0.95
TRAV1-2-201ENST00000390423 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 PXDNLA1KZ92 1463 aa9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 N4BP2Q86UW6 1770 aaPredicted RBP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 PHF14O94880 888 aa9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 HSPA1AP0DMV8 641 aaKnown RBP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 HSPA1BP0DMV9 641 aaKnown RBP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 LTV1Q96GA3 475 aaPredicted RBP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 C4BP0C0L5 1744 aa9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 USP47Q96K76 1375 aa9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 MEGF6O75095 1541 aa9.1□□□□□ -0.95
TRAV1-2-201ENST00000390423 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
TRAV1-2-201ENST00000390423 UBR3Q6ZT12 1888 aa9.09□□□□□ -0.95
TRAV1-2-201ENST00000390423 KCPQ6ZWJ8 1503 aa9.09□□□□□ -0.95
TRAV1-2-201ENST00000390423 USP31Q70CQ4 1352 aa9.09□□□□□ -0.95
TRAV1-2-201ENST00000390423 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
TRAV1-2-201ENST00000390423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 FSTL1Q12841 308 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 ARHGAP27Q6ZUM4 889 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 C16orf71Q8IYS4 520 aaPredicted RBP9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 BCS1LQ9Y276 419 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 PKD1L3Q7Z443 1732 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 PALLDQ8WX93 1383 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 SBNO2Q9Y2G9 1366 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 KIF13BQ9NQT8 1826 aa9.07□□□□□ -0.96
TRAV1-2-201ENST00000390423 EVC2Q86UK5 1308 aa9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 A0A0G2JLW4 131 aa9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 C9orf131Q5VYM1 1079 aa9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 ZCRB1Q8TBF4 217 aaKnown RBP9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 AK7Q96M32 723 aa9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 CD163L1Q9NR16 1453 aa9.06□□□□□ -0.96
TRAV1-2-201ENST00000390423 RRAGCQ9HB90 399 aa9.05□□□□□ -0.96
TRAV1-2-201ENST00000390423 BRCA1P38398 1863 aaKnown RBP9.04□□□□□ -0.96
TRAV1-2-201ENST00000390423 MMP10P09238 476 aa9.04□□□□□ -0.96
TRAV1-2-201ENST00000390423 IP6K1Q92551 441 aa9.04□□□□□ -0.96
TRAV1-2-201ENST00000390423 C10orf71Q711Q0 1435 aa9.04□□□□□ -0.96
TRAV1-2-201ENST00000390423 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
TRAV1-2-201ENST00000390423 DPEP1P16444 411 aa9.03□□□□□ -0.96
TRAV1-2-201ENST00000390423 FBLN1P23142 703 aa9.03□□□□□ -0.96
TRAV1-2-201ENST00000390423 MPRIPQ6WCQ1 1025 aa9.03□□□□□ -0.96
TRAV1-2-201ENST00000390423 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
TRAV1-2-201ENST00000390423 LINC00116Q8NCU8 138 aa9.03□□□□□ -0.96
TRAV1-2-201ENST00000390423 MAP2P11137 1827 aaKnown RBP9.03□□□□□ -0.96
TRAV1-2-201ENST00000390423 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
TRAV1-2-201ENST00000390423 FCHSD2O94868 740 aa9.02□□□□□ -0.97
TRAV1-2-201ENST00000390423 SMC1BQ8NDV3 1235 aa9.02□□□□□ -0.97
TRAV1-2-201ENST00000390423 ITGB4P16144 1822 aa9.02□□□□□ -0.97
TRAV1-2-201ENST00000390423 MAP3K19Q56UN5 1328 aa9.02□□□□□ -0.97
TRAV1-2-201ENST00000390423 SSFA2P28290 1259 aa9.01□□□□□ -0.97
TRAV1-2-201ENST00000390423 HOXC9P31274 260 aa9.01□□□□□ -0.97
TRAV1-2-201ENST00000390423 FAM161AQ3B820 660 aa9.01□□□□□ -0.97
TRAV1-2-201ENST00000390423 RNF181Q9P0P0 153 aa9.01□□□□□ -0.97
TRAV1-2-201ENST00000390423 KDM2BQ8NHM5 1336 aa9.01□□□□□ -0.97
TRAV1-2-201ENST00000390423 ARFGEF1Q9Y6D6 1849 aa9.01□□□□□ -0.97
TRAV1-2-201ENST00000390423 GNPATO15228 680 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 KCNA3P22001 575 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 TGFB2P61812 414 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 ITPK1Q13572 414 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 NBPF6Q5VWK0 638 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 NBPF4Q96M43 638 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 C4AP0C0L4 1744 aa9□□□□□ -0.97
TRAV1-2-201ENST00000390423 NSD3Q9BZ95 1437 aa8.99□□□□□ -0.97
TRAV1-2-201ENST00000390423 FOXN1O15353 648 aa8.99□□□□□ -0.97
TRAV1-2-201ENST00000390423 PIGBQ92521 554 aa8.99□□□□□ -0.97
TRAV1-2-201ENST00000390423 SBF1O95248 1867 aa8.99□□□□□ -0.97
TRAV1-2-201ENST00000390423 EDC4Q6P2E9 1401 aaKnown RBP8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 LOC102724428A0A0B4J2F2 783 aa8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 CYP27B1O15528 508 aa8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 SIK1P57059 783 aa8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 SLC12A5Q9H2X9 1139 aa8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 A0A1W2PP64 1363 aa8.98□□□□□ -0.97
TRAV1-2-201ENST00000390423 AMPHP49418 695 aa8.97□□□□□ -0.97
TRAV1-2-201ENST00000390423 RASSF7Q02833 373 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms