RNA–Protein interactions for RNA: ENST00000390360.3

TRBV6-4-201, Transcript of T cell receptor beta variable 6-4, humanhuman

APPRIS P1 BASIC

Gene TRBV6-4, Length 365 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4-201ENST00000390360 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
TRBV6-4-201ENST00000390360 RALBP1Q15311 655 aa13.35□□□□□ -0.27
TRBV6-4-201ENST00000390360 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
TRBV6-4-201ENST00000390360 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
TRBV6-4-201ENST00000390360 BAG6P46379 1132 aa13.34□□□□□ -0.27
TRBV6-4-201ENST00000390360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRBV6-4-201ENST00000390360 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
TRBV6-4-201ENST00000390360 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
TRBV6-4-201ENST00000390360 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
TRBV6-4-201ENST00000390360 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
TRBV6-4-201ENST00000390360 APBA3O96018 575 aa13.32□□□□□ -0.28
TRBV6-4-201ENST00000390360 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
TRBV6-4-201ENST00000390360 RGPD1P0DJD0 1748 aa13.31□□□□□ -0.28
TRBV6-4-201ENST00000390360 U2SURPO15042 1029 aaKnown RBP13.31□□□□□ -0.28
TRBV6-4-201ENST00000390360 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
TRBV6-4-201ENST00000390360 PLEKHO1Q53GL0 409 aaPredicted RBP13.31□□□□□ -0.28
TRBV6-4-201ENST00000390360 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
TRBV6-4-201ENST00000390360 KDRP35968 1356 aa13.31□□□□□ -0.28
TRBV6-4-201ENST00000390360 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
TRBV6-4-201ENST00000390360 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
TRBV6-4-201ENST00000390360 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
TRBV6-4-201ENST00000390360 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
TRBV6-4-201ENST00000390360 CYP27B1O15528 508 aa13.28□□□□□ -0.28
TRBV6-4-201ENST00000390360 HMOX1P09601 288 aa13.28□□□□□ -0.28
TRBV6-4-201ENST00000390360 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
TRBV6-4-201ENST00000390360 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
TRBV6-4-201ENST00000390360 KCNQ2O43526 872 aa13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 PHKG2P15735 406 aa13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.29
TRBV6-4-201ENST00000390360 PLSCR1O15162 318 aa13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
TRBV6-4-201ENST00000390360 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
TRBV6-4-201ENST00000390360 EZH2Q15910 746 aaKnown RBP13.25□□□□□ -0.29
TRBV6-4-201ENST00000390360 PTF1AQ7RTS3 328 aa13.25□□□□□ -0.29
TRBV6-4-201ENST00000390360 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
TRBV6-4-201ENST00000390360 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
TRBV6-4-201ENST00000390360 FCHSD2O94868 740 aa13.23□□□□□ -0.29
TRBV6-4-201ENST00000390360 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
TRBV6-4-201ENST00000390360 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 ANP32CO43423 234 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 NEFMP07197 916 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 AKAP4Q5JQC9 854 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
TRBV6-4-201ENST00000390360 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
TRBV6-4-201ENST00000390360 MTHFSDQ2M296 383 aaKnown RBP13.21□□□□□ -0.29
TRBV6-4-201ENST00000390360 GAS2L2Q8NHY3 880 aa13.21□□□□□ -0.29
TRBV6-4-201ENST00000390360 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.29
TRBV6-4-201ENST00000390360 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
TRBV6-4-201ENST00000390360 DOT1LQ8TEK3 1739 aa13.2□□□□□ -0.3
TRBV6-4-201ENST00000390360 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
TRBV6-4-201ENST00000390360 CABP4P57796 275 aa13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 SLC27A3Q5K4L6 730 aa13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 PIGBQ92521 554 aa13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
TRBV6-4-201ENST00000390360 BTAF1O14981 1849 aa13.18□□□□□ -0.3
TRBV6-4-201ENST00000390360 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRBV6-4-201ENST00000390360 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
TRBV6-4-201ENST00000390360 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
TRBV6-4-201ENST00000390360 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
TRBV6-4-201ENST00000390360 PROM2Q8N271 834 aa13.17□□□□□ -0.3
TRBV6-4-201ENST00000390360 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
TRBV6-4-201ENST00000390360 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
TRBV6-4-201ENST00000390360 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
TRBV6-4-201ENST00000390360 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
TRBV6-4-201ENST00000390360 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
TRBV6-4-201ENST00000390360 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
TRBV6-4-201ENST00000390360 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
TRBV6-4-201ENST00000390360 TOGARAM1Q9Y4F4 1720 aa13.15□□□□□ -0.3
TRBV6-4-201ENST00000390360 RREB1Q92766 1687 aa13.15□□□□□ -0.31
TRBV6-4-201ENST00000390360 NFATC2IPQ8NCF5 419 aa13.14□□□□□ -0.31
TRBV6-4-201ENST00000390360 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
TRBV6-4-201ENST00000390360 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
TRBV6-4-201ENST00000390360 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
TRBV6-4-201ENST00000390360 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 LRRC4BQ9NT99 713 aa13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 ITGB4P16144 1822 aa13.13□□□□□ -0.31
TRBV6-4-201ENST00000390360 TEFQ10587 303 aa13.12□□□□□ -0.31
TRBV6-4-201ENST00000390360 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
TRBV6-4-201ENST00000390360 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
TRBV6-4-201ENST00000390360 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
TRBV6-4-201ENST00000390360 SIK1P57059 783 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms