RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 IL13P35225 146 aa21.9■■□□□ 1.1
MRPL28-202ENST00000389675 BAG6P46379 1132 aa21.9■■□□□ 1.1
MRPL28-202ENST00000389675 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-202ENST00000389675 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
MRPL28-202ENST00000389675 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.09
MRPL28-202ENST00000389675 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
MRPL28-202ENST00000389675 NCAPD2Q15021 1401 aa21.89■■□□□ 1.09
MRPL28-202ENST00000389675 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
MRPL28-202ENST00000389675 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
MRPL28-202ENST00000389675 COL3A1P02461 1466 aaPredicted RBP21.85■■□□□ 1.09
MRPL28-202ENST00000389675 TRIM37O94972 964 aa21.85■■□□□ 1.09
MRPL28-202ENST00000389675 SPG7Q9UQ90 795 aa21.85■■□□□ 1.09
MRPL28-202ENST00000389675 NUDCQ9Y266 331 aa21.85■■□□□ 1.09
MRPL28-202ENST00000389675 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
MRPL28-202ENST00000389675 PCDH11XQ9BZA7 1347 aa21.83■■□□□ 1.09
MRPL28-202ENST00000389675 PCDH11YQ9BZA8 1340 aa21.83■■□□□ 1.09
MRPL28-202ENST00000389675 MYBBP1AQ9BQG0 1328 aaKnown RBP21.82■■□□□ 1.08
MRPL28-202ENST00000389675 HMOX1P09601 288 aa21.82■■□□□ 1.08
MRPL28-202ENST00000389675 PRKRIP1Q9H875 184 aaPredicted RBP21.81■■□□□ 1.08
MRPL28-202ENST00000389675 RREB1Q92766 1687 aa21.81■■□□□ 1.08
MRPL28-202ENST00000389675 KDRP35968 1356 aa21.8■■□□□ 1.08
MRPL28-202ENST00000389675 EN1Q05925 392 aaPredicted RBP21.8■■□□□ 1.08
MRPL28-202ENST00000389675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.8■■□□□ 1.08
MRPL28-202ENST00000389675 BCL9O00512 1426 aa21.8■■□□□ 1.08
MRPL28-202ENST00000389675 PLEKHG2Q9H7P9 1386 aa21.79■■□□□ 1.08
MRPL28-202ENST00000389675 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
MRPL28-202ENST00000389675 ACSBG1Q96GR2 724 aa21.79■■□□□ 1.08
MRPL28-202ENST00000389675 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
MRPL28-202ENST00000389675 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
MRPL28-202ENST00000389675 SHANK3Q9BYB0 1731 aa21.78■■□□□ 1.08
MRPL28-202ENST00000389675 AMOTQ4VCS5 1084 aa21.78■■□□□ 1.08
MRPL28-202ENST00000389675 APBA3O96018 575 aa21.77■■□□□ 1.08
MRPL28-202ENST00000389675 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
MRPL28-202ENST00000389675 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.08
MRPL28-202ENST00000389675 NUP188Q5SRE5 1749 aa21.77■■□□□ 1.08
MRPL28-202ENST00000389675 CYP27B1O15528 508 aa21.76■■□□□ 1.07
MRPL28-202ENST00000389675 ANP32CO43423 234 aa21.76■■□□□ 1.07
MRPL28-202ENST00000389675 BCL11BQ9C0K0 894 aaPredicted RBP21.76■■□□□ 1.07
MRPL28-202ENST00000389675 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
MRPL28-202ENST00000389675 R3HDM1Q15032 1099 aaKnown RBP21.75■■□□□ 1.07
MRPL28-202ENST00000389675 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
MRPL28-202ENST00000389675 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
MRPL28-202ENST00000389675 SYTL4Q96C24 671 aaPredicted RBP21.75■■□□□ 1.07
MRPL28-202ENST00000389675 KCNQ2O43526 872 aa21.73■■□□□ 1.07
MRPL28-202ENST00000389675 C1orf141Q5JVX7 400 aa21.73■■□□□ 1.07
MRPL28-202ENST00000389675 PHKG2P15735 406 aa21.72■■□□□ 1.07
MRPL28-202ENST00000389675 NHSQ6T4R5 1651 aa21.72■■□□□ 1.07
MRPL28-202ENST00000389675 PRIM1P49642 420 aaKnown RBP21.71■■□□□ 1.07
MRPL28-202ENST00000389675 EZH2Q15910 746 aaKnown RBP21.71■■□□□ 1.07
MRPL28-202ENST00000389675 PTF1AQ7RTS3 328 aa21.71■■□□□ 1.07
MRPL28-202ENST00000389675 DOT1LQ8TEK3 1739 aa21.71■■□□□ 1.07
MRPL28-202ENST00000389675 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
MRPL28-202ENST00000389675 PRKAR2BP31323 418 aa21.7■■□□□ 1.06
MRPL28-202ENST00000389675 RSPH6AQ9H0K4 717 aa21.69■■□□□ 1.06
MRPL28-202ENST00000389675 FCHSD2O94868 740 aa21.68■■□□□ 1.06
MRPL28-202ENST00000389675 NEFMP07197 916 aa21.68■■□□□ 1.06
MRPL28-202ENST00000389675 NKX1-1Q15270 411 aaPredicted RBP21.68■■□□□ 1.06
MRPL28-202ENST00000389675 CAMKK2Q96RR4 588 aa21.67■■□□□ 1.06
MRPL28-202ENST00000389675 WDR43Q15061 677 aaKnown RBP eCLIP21.66■■□□□ 1.06
MRPL28-202ENST00000389675 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
MRPL28-202ENST00000389675 DCAF5Q96JK2 942 aa21.66■■□□□ 1.06
MRPL28-202ENST00000389675 AKAP4Q5JQC9 854 aa21.65■■□□□ 1.06
MRPL28-202ENST00000389675 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
MRPL28-202ENST00000389675 GAS2L2Q8NHY3 880 aa21.65■■□□□ 1.06
MRPL28-202ENST00000389675 PNNQ9H307 717 aaKnown RBP21.65■■□□□ 1.06
MRPL28-202ENST00000389675 BTAF1O14981 1849 aa21.64■■□□□ 1.06
MRPL28-202ENST00000389675 PLSCR1O15162 318 aa21.64■■□□□ 1.05
MRPL28-202ENST00000389675 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
MRPL28-202ENST00000389675 TOGARAM1Q9Y4F4 1720 aa21.63■■□□□ 1.05
MRPL28-202ENST00000389675 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
MRPL28-202ENST00000389675 RGPD3A6NKT7 1758 aaPredicted RBP21.61■■□□□ 1.05
MRPL28-202ENST00000389675 RGPD4Q7Z3J3 1758 aa21.61■■□□□ 1.05
MRPL28-202ENST00000389675 MAPK8IP3Q9UPT6 1336 aa21.61■■□□□ 1.05
MRPL28-202ENST00000389675 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
MRPL28-202ENST00000389675 CABP4P57796 275 aa21.6■■□□□ 1.05
MRPL28-202ENST00000389675 KDM6AO15550 1401 aaPredicted RBP21.6■■□□□ 1.05
MRPL28-202ENST00000389675 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
MRPL28-202ENST00000389675 ITGB4P16144 1822 aa21.59■■□□□ 1.05
MRPL28-202ENST00000389675 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.05
MRPL28-202ENST00000389675 PIGBQ92521 554 aa21.58■■□□□ 1.05
MRPL28-202ENST00000389675 TXNRD1Q16881 649 aa21.57■■□□□ 1.04
MRPL28-202ENST00000389675 MRS2Q9HD23 443 aa21.57■■□□□ 1.04
MRPL28-202ENST00000389675 RNMTO43148 476 aaKnown RBP21.56■■□□□ 1.04
MRPL28-202ENST00000389675 SMARCC1Q92922 1105 aaPredicted RBP21.56■■□□□ 1.04
MRPL28-202ENST00000389675 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
MRPL28-202ENST00000389675 PLEKHF1Q96S99 279 aa21.55■■□□□ 1.04
MRPL28-202ENST00000389675 LGR6Q9HBX8 967 aa21.55■■□□□ 1.04
MRPL28-202ENST00000389675 SCN11AQ9UI33 1791 aa21.54■■□□□ 1.04
MRPL28-202ENST00000389675 PALLDQ8WX93 1383 aa21.54■■□□□ 1.04
MRPL28-202ENST00000389675 YY1P25490 414 aa21.54■■□□□ 1.04
MRPL28-202ENST00000389675 CCDC184Q52MB2 194 aa21.54■■□□□ 1.04
MRPL28-202ENST00000389675 NBPF14Q5TI25 921 aa21.54■■□□□ 1.04
MRPL28-202ENST00000389675 ADAMTS8Q9UP79 889 aa21.54■■□□□ 1.04
MRPL28-202ENST00000389675 CCDC146Q8IYE0 955 aa21.53■■□□□ 1.04
MRPL28-202ENST00000389675 PROM2Q8N271 834 aa21.53■■□□□ 1.04
MRPL28-202ENST00000389675 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
MRPL28-202ENST00000389675 CASZ1Q86V15 1759 aa21.53■■□□□ 1.04
MRPL28-202ENST00000389675 TEFQ10587 303 aa21.52■■□□□ 1.04
MRPL28-202ENST00000389675 NFE2L2Q16236 605 aa21.52■■□□□ 1.04
MRPL28-202ENST00000389675 SLC27A3Q5K4L6 730 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms