RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 EYA1Q99502 592 aa15.18■□□□□ 0.02
CAPRIN1-202ENST00000389645 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
CAPRIN1-202ENST00000389645 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
CAPRIN1-202ENST00000389645 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
CAPRIN1-202ENST00000389645 HOXC9P31274 260 aa15.16■□□□□ 0.02
CAPRIN1-202ENST00000389645 MCM10Q7L590 875 aa15.16■□□□□ 0.02
CAPRIN1-202ENST00000389645 ATF3P18847 181 aa15.16■□□□□ 0.02
CAPRIN1-202ENST00000389645 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
CAPRIN1-202ENST00000389645 TSPYL6Q8N831 410 aa15.16■□□□□ 0.02
CAPRIN1-202ENST00000389645 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
CAPRIN1-202ENST00000389645 FLT4P35916 1363 aa15.15■□□□□ 0.02
CAPRIN1-202ENST00000389645 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
CAPRIN1-202ENST00000389645 SBNO1A3KN83 1393 aa15.15■□□□□ 0.02
CAPRIN1-202ENST00000389645 KRT28Q7Z3Y7 464 aa15.15■□□□□ 0.02
CAPRIN1-202ENST00000389645 GLIPR1L2Q4G1C9 344 aa15.13■□□□□ 0.01
CAPRIN1-202ENST00000389645 MBIPQ9NS73 344 aa15.13■□□□□ 0.01
CAPRIN1-202ENST00000389645 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
CAPRIN1-202ENST00000389645 IL16Q14005 1332 aa15.13■□□□□ 0.01
CAPRIN1-202ENST00000389645 MTHFSDQ2M296 383 aaKnown RBP15.13■□□□□ 0.01
CAPRIN1-202ENST00000389645 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
CAPRIN1-202ENST00000389645 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
CAPRIN1-202ENST00000389645 HSCBQ8IWL3 235 aa15.12■□□□□ 0.01
CAPRIN1-202ENST00000389645 AAMPQ13685 434 aa15.12■□□□□ 0.01
CAPRIN1-202ENST00000389645 USP19O94966 1318 aa15.11■□□□□ 0.01
CAPRIN1-202ENST00000389645 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
CAPRIN1-202ENST00000389645 GCP02774 474 aa15.11■□□□□ 0.01
CAPRIN1-202ENST00000389645 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
CAPRIN1-202ENST00000389645 GNAI1P63096 354 aa15.11■□□□□ 0.01
CAPRIN1-202ENST00000389645 C8orf58Q8NAV2 365 aa15.11■□□□□ 0.01
CAPRIN1-202ENST00000389645 C1orf167Q5SNV9 1468 aa15.1■□□□□ 0.01
CAPRIN1-202ENST00000389645 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
CAPRIN1-202ENST00000389645 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
CAPRIN1-202ENST00000389645 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
CAPRIN1-202ENST00000389645 LRRC59Q96AG4 307 aaKnown RBP15.1■□□□□ 0.01
CAPRIN1-202ENST00000389645 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
CAPRIN1-202ENST00000389645 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
CAPRIN1-202ENST00000389645 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
CAPRIN1-202ENST00000389645 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
CAPRIN1-202ENST00000389645 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
CAPRIN1-202ENST00000389645 NECTIN2Q92692 538 aa15.09■□□□□ 0.01
CAPRIN1-202ENST00000389645 LMOD3Q0VAK6 560 aa15.08■□□□□ 0.01
CAPRIN1-202ENST00000389645 NBPF6Q5VWK0 638 aa15.08■□□□□ 0.01
CAPRIN1-202ENST00000389645 NBPF4Q96M43 638 aa15.08■□□□□ 0.01
CAPRIN1-202ENST00000389645 CFAP44Q96MT7 982 aa15.08■□□□□ 0.01
CAPRIN1-202ENST00000389645 IFT57Q9NWB7 429 aa15.08■□□□□ 0.01
CAPRIN1-202ENST00000389645 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0.01
CAPRIN1-202ENST00000389645 DLG5Q8TDM6 1919 aa15.08■□□□□ 0
CAPRIN1-202ENST00000389645 ZNF853P0CG23 659 aa15.08■□□□□ 0
CAPRIN1-202ENST00000389645 VAMP4O75379 141 aa15.08■□□□□ 0
CAPRIN1-202ENST00000389645 IP6K1Q92551 441 aa15.08■□□□□ 0
CAPRIN1-202ENST00000389645 ZBTB40Q9NUA8 1239 aa15.08■□□□□ 0
CAPRIN1-202ENST00000389645 NWD1Q149M9 1564 aa15.07■□□□□ 0
CAPRIN1-202ENST00000389645 MARF1Q9Y4F3 1742 aaKnown RBP15.07■□□□□ 0
CAPRIN1-202ENST00000389645 CHD1LQ86WJ1 897 aa15.07■□□□□ 0
CAPRIN1-202ENST00000389645 AXIN2Q9Y2T1 843 aa15.07■□□□□ 0
CAPRIN1-202ENST00000389645 ARHGEF10O15013 1369 aa15.06■□□□□ 0
CAPRIN1-202ENST00000389645 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
CAPRIN1-202ENST00000389645 KCNH5Q8NCM2 988 aa15.05■□□□□ 0
CAPRIN1-202ENST00000389645 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
CAPRIN1-202ENST00000389645 CADPS2Q86UW7 1296 aa15.05■□□□□ -0
CAPRIN1-202ENST00000389645 HDAC1Q13547 482 aaPredicted RBP15.04■□□□□ -0
CAPRIN1-202ENST00000389645 MST1RQ04912 1400 aa15.04■□□□□ -0
CAPRIN1-202ENST00000389645 ARHGEF25Q86VW2 580 aa15.04■□□□□ -0
CAPRIN1-202ENST00000389645 KDRP35968 1356 aa15.03■□□□□ -0
CAPRIN1-202ENST00000389645 ALDH1L2Q3SY69 923 aa15.03■□□□□ -0
CAPRIN1-202ENST00000389645 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
CAPRIN1-202ENST00000389645 CHMP4BQ9H444 224 aaKnown RBP15.03■□□□□ -0
CAPRIN1-202ENST00000389645 RGPD1P0DJD0 1748 aa15.03■□□□□ -0
CAPRIN1-202ENST00000389645 SMC5Q8IY18 1101 aa15.02■□□□□ -0
CAPRIN1-202ENST00000389645 CHL1O00533 1208 aa15.02■□□□□ -0
CAPRIN1-202ENST00000389645 MSH6P52701 1360 aa15.02■□□□□ -0
CAPRIN1-202ENST00000389645 MRPL50Q8N5N7 158 aaKnown RBP15.02□□□□□ -0.01
CAPRIN1-202ENST00000389645 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
CAPRIN1-202ENST00000389645 CHRNA2Q15822 529 aa15.01□□□□□ -0.01
CAPRIN1-202ENST00000389645 NFAT5O94916 1531 aa15.01□□□□□ -0.01
CAPRIN1-202ENST00000389645 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
CAPRIN1-202ENST00000389645 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
CAPRIN1-202ENST00000389645 LTN1O94822 1766 aa15□□□□□ -0.01
CAPRIN1-202ENST00000389645 IL17REQ8NFR9 667 aa15□□□□□ -0.01
CAPRIN1-202ENST00000389645 TSPYL4Q9UJ04 414 aa15□□□□□ -0.01
CAPRIN1-202ENST00000389645 NUCB1Q02818 461 aa15□□□□□ -0.01
CAPRIN1-202ENST00000389645 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
CAPRIN1-202ENST00000389645 ZBTB7BO15156 539 aaPredicted RBP15□□□□□ -0.01
CAPRIN1-202ENST00000389645 STRCQ7RTU9 1775 aa14.99□□□□□ -0.01
CAPRIN1-202ENST00000389645 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
CAPRIN1-202ENST00000389645 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
CAPRIN1-202ENST00000389645 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
CAPRIN1-202ENST00000389645 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
CAPRIN1-202ENST00000389645 KIF24Q5T7B8 1368 aa14.99□□□□□ -0.01
CAPRIN1-202ENST00000389645 CHMP5Q9NZZ3 219 aa14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 C16orf71Q8IYS4 520 aaPredicted RBP14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 LGR6Q9HBX8 967 aa14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 CRB1P82279 1406 aa14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 F6X3S4 739 aa14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
CAPRIN1-202ENST00000389645 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
CAPRIN1-202ENST00000389645 ARID3AQ99856 593 aa14.97□□□□□ -0.01
CAPRIN1-202ENST00000389645 RTL1A6NKG5 1358 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms