RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 USP47Q96K76 1375 aa13.77□□□□□ -0.21
IFT88-203ENST00000389373 TUBGCP6Q96RT7 1819 aa13.76□□□□□ -0.21
IFT88-203ENST00000389373 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
IFT88-203ENST00000389373 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
IFT88-203ENST00000389373 SLC12A5Q9H2X9 1139 aa13.75□□□□□ -0.21
IFT88-203ENST00000389373 NSD2O96028 1365 aa13.74□□□□□ -0.21
IFT88-203ENST00000389373 SBNO2Q9Y2G9 1366 aa13.74□□□□□ -0.21
IFT88-203ENST00000389373 CEP350Q5VT06 3117 aa13.74□□□□□ -0.21
IFT88-203ENST00000389373 LTN1O94822 1766 aa13.74□□□□□ -0.21
IFT88-203ENST00000389373 AMPHP49418 695 aa13.74□□□□□ -0.21
IFT88-203ENST00000389373 FLAD1Q8NFF5 587 aa13.74□□□□□ -0.21
IFT88-203ENST00000389373 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
IFT88-203ENST00000389373 KIF3CO14782 793 aa13.73□□□□□ -0.21
IFT88-203ENST00000389373 FBLN1P23142 703 aa13.73□□□□□ -0.21
IFT88-203ENST00000389373 ADCY9O60503 1353 aa13.72□□□□□ -0.21
IFT88-203ENST00000389373 PHF14O94880 888 aa13.72□□□□□ -0.21
IFT88-203ENST00000389373 APLP1P51693 650 aa13.72□□□□□ -0.21
IFT88-203ENST00000389373 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
IFT88-203ENST00000389373 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
IFT88-203ENST00000389373 DOT1LQ8TEK3 1739 aa13.71□□□□□ -0.21
IFT88-203ENST00000389373 HOXC9P31274 260 aa13.71□□□□□ -0.21
IFT88-203ENST00000389373 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.21
IFT88-203ENST00000389373 AK7Q96M32 723 aa13.71□□□□□ -0.21
IFT88-203ENST00000389373 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
IFT88-203ENST00000389373 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
IFT88-203ENST00000389373 LY75O60449 1722 aa13.7□□□□□ -0.22
IFT88-203ENST00000389373 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
IFT88-203ENST00000389373 CAPN15O75808 1086 aa13.7□□□□□ -0.22
IFT88-203ENST00000389373 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
IFT88-203ENST00000389373 COG3Q96JB2 828 aa13.7□□□□□ -0.22
IFT88-203ENST00000389373 MAP3K19Q56UN5 1328 aa13.69□□□□□ -0.22
IFT88-203ENST00000389373 CD163L1Q9NR16 1453 aa13.69□□□□□ -0.22
IFT88-203ENST00000389373 RAPGEF4Q8WZA2 1011 aa13.69□□□□□ -0.22
IFT88-203ENST00000389373 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
IFT88-203ENST00000389373 GOLGB1Q14789 3259 aaKnown RBP13.69□□□□□ -0.22
IFT88-203ENST00000389373 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
IFT88-203ENST00000389373 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
IFT88-203ENST00000389373 NBPF6Q5VWK0 638 aa13.68□□□□□ -0.22
IFT88-203ENST00000389373 NBPF4Q96M43 638 aa13.68□□□□□ -0.22
IFT88-203ENST00000389373 MEGF6O75095 1541 aa13.68□□□□□ -0.22
IFT88-203ENST00000389373 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
IFT88-203ENST00000389373 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
IFT88-203ENST00000389373 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
IFT88-203ENST00000389373 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
IFT88-203ENST00000389373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
IFT88-203ENST00000389373 TOMM70O94826 608 aa13.66□□□□□ -0.22
IFT88-203ENST00000389373 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
IFT88-203ENST00000389373 USP54Q70EL1 1684 aa13.66□□□□□ -0.22
IFT88-203ENST00000389373 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
IFT88-203ENST00000389373 BCS1LQ9Y276 419 aa13.65□□□□□ -0.22
IFT88-203ENST00000389373 HTRA3P83110 453 aa13.64□□□□□ -0.23
IFT88-203ENST00000389373 ARHGAP27Q6ZUM4 889 aa13.64□□□□□ -0.23
IFT88-203ENST00000389373 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
IFT88-203ENST00000389373 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
IFT88-203ENST00000389373 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
IFT88-203ENST00000389373 COL13A1Q5TAT6 717 aaPredicted RBP13.63□□□□□ -0.23
IFT88-203ENST00000389373 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
IFT88-203ENST00000389373 RGPD2P0DJD1 1756 aa13.63□□□□□ -0.23
IFT88-203ENST00000389373 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
IFT88-203ENST00000389373 PCDH11XQ9BZA7 1347 aa13.63□□□□□ -0.23
IFT88-203ENST00000389373 PCDH11YQ9BZA8 1340 aa13.63□□□□□ -0.23
IFT88-203ENST00000389373 C5P01031 1676 aa13.63□□□□□ -0.23
IFT88-203ENST00000389373 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
IFT88-203ENST00000389373 SSFA2P28290 1259 aa13.61□□□□□ -0.23
IFT88-203ENST00000389373 GNPATO15228 680 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 CYP27B1O15528 508 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 MMP10P09238 476 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
IFT88-203ENST00000389373 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 PIGBQ92521 554 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
IFT88-203ENST00000389373 NSD3Q9BZ95 1437 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 LOC102724428A0A0B4J2F2 783 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 FCHSD2O94868 740 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 SIK1P57059 783 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 KLRG1Q96E93 195 aa13.59□□□□□ -0.23
IFT88-203ENST00000389373 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
IFT88-203ENST00000389373 TGFB2P61812 414 aa13.57□□□□□ -0.24
IFT88-203ENST00000389373 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
IFT88-203ENST00000389373 RBM46Q8TBY0 533 aaKnown RBP13.57□□□□□ -0.24
IFT88-203ENST00000389373 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
IFT88-203ENST00000389373 RTL1A6NKG5 1358 aa13.57□□□□□ -0.24
IFT88-203ENST00000389373 DPEP1P16444 411 aa13.56□□□□□ -0.24
IFT88-203ENST00000389373 ITPK1Q13572 414 aa13.56□□□□□ -0.24
IFT88-203ENST00000389373 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
IFT88-203ENST00000389373 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
IFT88-203ENST00000389373 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 FYB1O15117 783 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 TMF1P82094 1093 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 RRAGCQ9HB90 399 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
IFT88-203ENST00000389373 FSTL1Q12841 308 aa13.54□□□□□ -0.24
IFT88-203ENST00000389373 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
IFT88-203ENST00000389373 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
IFT88-203ENST00000389373 RTCBQ9Y3I0 505 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 249.4 ms