RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 GCC1Q96CN9 775 aa14.55□□□□□ -0.08
RAPGEF3-201ENST00000389212 SMARCA5O60264 1052 aaPredicted RBP14.54□□□□□ -0.08
RAPGEF3-201ENST00000389212 CD2BP2O95400 341 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-201ENST00000389212 BMP2KLQ5H9B9 411 aa14.54□□□□□ -0.08
RAPGEF3-201ENST00000389212 PIK3R4Q99570 1358 aa14.54□□□□□ -0.08
RAPGEF3-201ENST00000389212 MON2Q7Z3U7 1717 aa14.54□□□□□ -0.08
RAPGEF3-201ENST00000389212 FAM13BQ9NYF5 915 aa14.54□□□□□ -0.08
RAPGEF3-201ENST00000389212 NECTIN2Q92692 538 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 AMOTL2Q9Y2J4 779 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 TECPR2O15040 1411 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 C3P01024 1663 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 F6X3S4 739 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 SLC4A10Q6U841 1118 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 NGDNQ8NEJ9 315 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 MAP3K19Q56UN5 1328 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 GSPT1P15170 499 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 MEIS3Q99687 375 aa14.53□□□□□ -0.08
RAPGEF3-201ENST00000389212 ITSN1Q15811 1721 aa14.52□□□□□ -0.08
RAPGEF3-201ENST00000389212 PTPRUQ92729 1446 aa14.52□□□□□ -0.08
RAPGEF3-201ENST00000389212 MCM4P33991 863 aa14.52□□□□□ -0.08
RAPGEF3-201ENST00000389212 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
RAPGEF3-201ENST00000389212 MTHFSDQ2M296 383 aaKnown RBP14.52□□□□□ -0.09
RAPGEF3-201ENST00000389212 G2E3Q7L622 706 aa14.52□□□□□ -0.09
RAPGEF3-201ENST00000389212 SIRT1Q96EB6 747 aa14.52□□□□□ -0.09
RAPGEF3-201ENST00000389212 CHMP5Q9NZZ3 219 aa14.52□□□□□ -0.09
RAPGEF3-201ENST00000389212 VGLL3A8MV65 326 aa14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 CHL1O00533 1208 aa14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 HSP90AB1P08238 724 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 USP6P35125 1406 aa14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 RBM25P49756 843 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 KIF2CQ99661 725 aa14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 MSH6P52701 1360 aa14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-201ENST00000389212 AKAP12Q02952 1782 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 AMPHP49418 695 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 PLEKHM2Q8IWE5 1019 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 OVOS2A0A0J9YW53 1432 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 OVOS2Q6IE36 1432 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 PLEKHG3A1L390 1219 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 TSPYL4Q9UJ04 414 aa14.5□□□□□ -0.09
RAPGEF3-201ENST00000389212 KNDC1Q76NI1 1749 aa14.49□□□□□ -0.09
RAPGEF3-201ENST00000389212 TRIM44Q96DX7 344 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF3-201ENST00000389212 PDCL3Q9H2J4 239 aa14.49□□□□□ -0.09
RAPGEF3-201ENST00000389212 EID1Q9Y6B2 187 aa14.49□□□□□ -0.09
RAPGEF3-201ENST00000389212 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
RAPGEF3-201ENST00000389212 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
RAPGEF3-201ENST00000389212 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 RIMS1Q86UR5 1692 aaKnown RBP14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 INTS3Q68E01 1043 aaKnown RBP14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 CEP85Q6P2H3 762 aa14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 EYA1Q99502 592 aa14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 DCTPP1Q9H773 170 aa14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 RGS12O14924 1447 aa14.48□□□□□ -0.09
RAPGEF3-201ENST00000389212 NLRP6P59044 892 aa14.47□□□□□ -0.09
RAPGEF3-201ENST00000389212 CDC45O75419 566 aa14.47□□□□□ -0.09
RAPGEF3-201ENST00000389212 ANKRD44Q8N8A2 993 aa14.47□□□□□ -0.09
RAPGEF3-201ENST00000389212 TSHZ3Q63HK5 1081 aa14.46□□□□□ -0.09
RAPGEF3-201ENST00000389212 PLEKHG1Q9ULL1 1385 aa14.46□□□□□ -0.09
RAPGEF3-201ENST00000389212 TRAK2O60296 914 aa14.46□□□□□ -0.09
RAPGEF3-201ENST00000389212 USHBP1Q8N6Y0 703 aa14.46□□□□□ -0.09
RAPGEF3-201ENST00000389212 ATP10DQ9P241 1426 aa14.45□□□□□ -0.1
RAPGEF3-201ENST00000389212 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
RAPGEF3-201ENST00000389212 RTL1A6NKG5 1358 aa14.45□□□□□ -0.1
RAPGEF3-201ENST00000389212 CRB1P82279 1406 aa14.45□□□□□ -0.1
RAPGEF3-201ENST00000389212 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 ANP32BQ92688 251 aaKnown RBP14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 PRDM4Q9UKN5 801 aa14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 NRKQ7Z2Y5 1582 aa14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 GAS2L2Q8NHY3 880 aa14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 SNX21Q969T3 373 aa14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 PANK2Q9BZ23 570 aa14.44□□□□□ -0.1
RAPGEF3-201ENST00000389212 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-201ENST00000389212 GOLGA6L3A6NEY3 463 aa14.43□□□□□ -0.1
RAPGEF3-201ENST00000389212 DHX37Q8IY37 1157 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-201ENST00000389212 EXOC6BQ9Y2D4 811 aa14.43□□□□□ -0.1
RAPGEF3-201ENST00000389212 USP31Q70CQ4 1352 aa14.43□□□□□ -0.1
RAPGEF3-201ENST00000389212 CEP170BQ9Y4F5 1589 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 KCNA6P17658 529 aa14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 SDSP20132 328 aa14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 FLT4P35916 1363 aa14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 DDIT3P35638 169 aa14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 RGPD8O14715 1765 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-201ENST00000389212 CLCN1P35523 988 aa14.41□□□□□ -0.1
RAPGEF3-201ENST00000389212 RPAP2Q8IXW5 612 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF3-201ENST00000389212 KIAA0232Q92628 1395 aa14.41□□□□□ -0.1
RAPGEF3-201ENST00000389212 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
RAPGEF3-201ENST00000389212 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF3-201ENST00000389212 XRCC6P12956 609 aaKnown RBP eCLIP14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 SSFA2P28290 1259 aa14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 ABTB2Q8N961 1025 aa14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 PTPRCP08575 1304 aa14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 SBNO1A3KN83 1393 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms