RNA–Protein interactions for RNA: ENST00000383960.1

RNU1-109P-201, Transcript of RNA, U1 small nuclear 109, pseudogene, humanhuman

BASIC

Gene RNU1-109P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-109P-201ENST00000383960 RABGEF1Q9UJ41 708 aa3.38□□□□□ -1.87
RNU1-109P-201ENST00000383960 ATP1B4Q9UN42 357 aaPredicted RBP3.38□□□□□ -1.87
RNU1-109P-201ENST00000383960 SMC3Q9UQE7 1217 aa3.38□□□□□ -1.87
RNU1-109P-201ENST00000383960 SYNRGQ9UMZ2 1314 aa3.38□□□□□ -1.87
RNU1-109P-201ENST00000383960 FAM205CA6NFA0 338 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 NBPF26B4DH59 902 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 SMAPO00193 183 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 MPHOSPH10O00566 681 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 IPO8O15397 1037 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 PPP1R15AO75807 674 aaPredicted RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 PARNO95453 639 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 VDRP11473 427 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 DNAJB2P25686 324 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 GYS2P54840 703 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 HDLBPQ00341 1268 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 DMTNQ08495 405 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 KIAA2012Q0VF49 1180 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 SF3B2Q13435 895 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 RGL3Q3MIN7 710 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 HSP90B2PQ58FF3 399 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 SH3D19Q5HYK7 790 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 DNAJC14Q6Y2X3 702 aaPredicted RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 PDILTQ8N807 584 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 RNF217Q8TC41 542 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 VTI1AQ96AJ9 217 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 SCYL1Q96KG9 808 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 CFAP53Q96M91 514 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 GTPBP4Q9BZE4 634 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 KIAA1522Q9P206 1035 aaPredicted RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 PNMA3Q9UL41 463 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 VPS9D1Q9Y2B5 631 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 TMA7Q9Y2S6 64 aaKnown RBP3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 AXIN2Q9Y2T1 843 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 CEP83Q9Y592 693 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 WASHC2AQ641Q2 1341 aa3.37□□□□□ -1.87
RNU1-109P-201ENST00000383960 ZCCHC6Q5VYS8 1495 aaKnown RBP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 CFAP69A5D8W1 941 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 HMMRO75330 724 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 CD46P15529 392 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 TDO2P48775 406 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 PPP4CP60510 307 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 ZC3H6P61129 1189 aaKnown RBP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 HMGN5P82970 282 aaKnown RBP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 C11orf96Q7Z7L8 435 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 NGEFQ8N5V2 710 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 FAM163AQ96GL9 167 aaPredicted RBP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 BEGAINQ9BUH8 593 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 CCDC94Q9BW85 323 aaPredicted RBP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 RSPH9Q9H1X1 276 aaPredicted RBP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 FAM13BQ9NYF5 915 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 PDZRN3Q9UPQ7 1066 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 FAN1Q9Y2M0 1017 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 IVNS1ABPQ9Y6Y0 642 aa3.36□□□□□ -1.87
RNU1-109P-201ENST00000383960 TK2O00142 265 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 PES1O00541 588 aaKnown RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 PPP1R12AO14974 1030 aaPredicted RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 HRO43593 1189 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 IBSPP21815 317 aaPredicted RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 CASQ1P31415 396 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 FLT3P36888 993 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 CD151P48509 253 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 SKIV2LQ15477 1246 aaKnown RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 PTPROQ16827 1216 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 KLHL10Q6JEL2 608 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 PCGF5Q86SE9 256 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 CCDC146Q8IYE0 955 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 OGFOD1Q8N543 542 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 C1orf131Q8NDD1 294 aaKnown RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 GPATCH3Q96I76 525 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 NAP1L4Q99733 375 aaKnown RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 RANBP17Q9H2T7 1088 aaKnown RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 PNNQ9H307 717 aaKnown RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 EFCC1Q9HA90 598 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 CWC25Q9NXE8 425 aaPredicted RBP3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 CHPF2Q9P2E5 772 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 GABBR1Q9UBS5 961 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 SBNO2Q9Y2G9 1366 aa3.35□□□□□ -1.87
RNU1-109P-201ENST00000383960 CCDC180Q9P1Z9 1646 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 CCDC189A1A4V9 331 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 CTAGE5O15320 804 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 KIF1CO43896 1103 aaKnown RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 COQ9O75208 318 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 HSP90AB1P08238 724 aaKnown RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 SLC10A3P09131 477 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 CCDC172P0C7W6 258 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 ZNF853P0CG23 659 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 NAP1L1P55209 391 aaKnown RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 LSM11P83369 360 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 XPCQ01831 940 aaPredicted RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 PSME1Q06323 249 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 BIRC2Q13490 618 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 FAM98CQ17RN3 349 aaKnown RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 TUSC1Q2TAM9 212 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 NAALADL2Q58DX5 795 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 MYSM1Q5VVJ2 828 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 FBXO31Q5XUX0 539 aaPredicted RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 DPH6Q7L8W6 267 aa3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 NOP9Q86U38 636 aaKnown RBP3.34□□□□□ -1.87
RNU1-109P-201ENST00000383960 LAPTM4BQ86VI4 370 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms