RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 CCDC125Q86Z20 511 aa23.58■■□□□ 1.37
CD9-202ENST00000382515 OVOS2A0A0G2JMS6 1433 aa23.58■■□□□ 1.36
CD9-202ENST00000382515 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
CD9-202ENST00000382515 THSD7AQ9UPZ6 1657 aa23.57■■□□□ 1.36
CD9-202ENST00000382515 MARCH10Q8NA82 808 aaPredicted RBP23.55■■□□□ 1.36
CD9-202ENST00000382515 BCL9O00512 1426 aa23.55■■□□□ 1.36
CD9-202ENST00000382515 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
CD9-202ENST00000382515 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
CD9-202ENST00000382515 TNS2Q63HR2 1409 aa23.54■■□□□ 1.36
CD9-202ENST00000382515 HMOX1P09601 288 aa23.54■■□□□ 1.36
CD9-202ENST00000382515 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
CD9-202ENST00000382515 AEBP1Q8IUX7 1158 aa23.54■■□□□ 1.36
CD9-202ENST00000382515 DDX54Q8TDD1 881 aaKnown RBP23.54■■□□□ 1.36
CD9-202ENST00000382515 NEFMP07197 916 aa23.52■■□□□ 1.36
CD9-202ENST00000382515 IFNL2Q8IZJ0 200 aa23.52■■□□□ 1.36
CD9-202ENST00000382515 MEGF6O75095 1541 aa23.52■■□□□ 1.36
CD9-202ENST00000382515 HSP90AB1P08238 724 aaKnown RBP23.51■■□□□ 1.35
CD9-202ENST00000382515 WDR43Q15061 677 aaKnown RBP eCLIP23.51■■□□□ 1.35
CD9-202ENST00000382515 PARP4Q9UKK3 1724 aaKnown RBP23.5■■□□□ 1.35
CD9-202ENST00000382515 NKX1-1Q15270 411 aaPredicted RBP23.5■■□□□ 1.35
CD9-202ENST00000382515 RSPH6AQ9H0K4 717 aa23.5■■□□□ 1.35
CD9-202ENST00000382515 CYP27B1O15528 508 aa23.48■■□□□ 1.35
CD9-202ENST00000382515 GAS2L2Q8NHY3 880 aa23.48■■□□□ 1.35
CD9-202ENST00000382515 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
CD9-202ENST00000382515 C1orf141Q5JVX7 400 aa23.47■■□□□ 1.35
CD9-202ENST00000382515 PHKG2P15735 406 aa23.46■■□□□ 1.35
CD9-202ENST00000382515 RGPD1P0DJD0 1748 aa23.45■■□□□ 1.34
CD9-202ENST00000382515 SF3B2Q13435 895 aaKnown RBP23.45■■□□□ 1.34
CD9-202ENST00000382515 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.34
CD9-202ENST00000382515 FAM182BQ5T319 152 aa23.45■■□□□ 1.34
CD9-202ENST00000382515 ZNF530Q6P9A1 599 aaPredicted RBP23.45■■□□□ 1.34
CD9-202ENST00000382515 UPF1Q92900 1129 aaKnown RBP eCLIP23.45■■□□□ 1.34
CD9-202ENST00000382515 BCL11BQ9C0K0 894 aaPredicted RBP23.45■■□□□ 1.34
CD9-202ENST00000382515 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
CD9-202ENST00000382515 DCAF5Q96JK2 942 aa23.44■■□□□ 1.34
CD9-202ENST00000382515 CCER2I3L3R5 266 aa23.43■■□□□ 1.34
CD9-202ENST00000382515 RGPD2P0DJD1 1756 aa23.42■■□□□ 1.34
CD9-202ENST00000382515 MTHFSDQ2M296 383 aaKnown RBP23.42■■□□□ 1.34
CD9-202ENST00000382515 PNISRQ8TF01 805 aaKnown RBP23.42■■□□□ 1.34
CD9-202ENST00000382515 PLEKHF1Q96S99 279 aa23.42■■□□□ 1.34
CD9-202ENST00000382515 ADAMTS8Q9UP79 889 aa23.42■■□□□ 1.34
CD9-202ENST00000382515 LRRC37A3O60309 1634 aa23.41■■□□□ 1.34
CD9-202ENST00000382515 ERVV-2B6SEH9 535 aa23.4■■□□□ 1.34
CD9-202ENST00000382515 HTATSF1O43719 755 aaKnown RBP23.4■■□□□ 1.34
CD9-202ENST00000382515 TRIM37O94972 964 aa23.4■■□□□ 1.34
CD9-202ENST00000382515 PHACTR3Q96KR7 559 aa23.4■■□□□ 1.34
CD9-202ENST00000382515 MAPK8IP3Q9UPT6 1336 aa23.39■■□□□ 1.34
CD9-202ENST00000382515 GNAT3A8MTJ3 354 aa23.38■■□□□ 1.33
CD9-202ENST00000382515 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
CD9-202ENST00000382515 CCDC184Q52MB2 194 aa23.37■■□□□ 1.33
CD9-202ENST00000382515 WNK3Q9BYP7 1800 aa23.37■■□□□ 1.33
CD9-202ENST00000382515 EP400Q96L91 3159 aa23.37■■□□□ 1.33
CD9-202ENST00000382515 BRWD3Q6RI45 1802 aa23.36■■□□□ 1.33
CD9-202ENST00000382515 PLSCR1O15162 318 aa23.36■■□□□ 1.33
CD9-202ENST00000382515 HMGB2P26583 209 aaKnown RBP23.36■■□□□ 1.33
CD9-202ENST00000382515 BAG6P46379 1132 aa23.36■■□□□ 1.33
CD9-202ENST00000382515 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
CD9-202ENST00000382515 APBA3O96018 575 aa23.34■■□□□ 1.33
CD9-202ENST00000382515 RTF1Q92541 710 aaKnown RBP23.34■■□□□ 1.33
CD9-202ENST00000382515 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
CD9-202ENST00000382515 KCNQ2O43526 872 aa23.33■■□□□ 1.33
CD9-202ENST00000382515 NFE2L2Q16236 605 aa23.33■■□□□ 1.33
CD9-202ENST00000382515 SYTL4Q96C24 671 aaPredicted RBP23.33■■□□□ 1.33
CD9-202ENST00000382515 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
CD9-202ENST00000382515 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
CD9-202ENST00000382515 RNMTO43148 476 aaKnown RBP23.31■■□□□ 1.32
CD9-202ENST00000382515 CABP4P57796 275 aa23.31■■□□□ 1.32
CD9-202ENST00000382515 LMOD3Q0VAK6 560 aa23.31■■□□□ 1.32
CD9-202ENST00000382515 NCBP3Q53F19 620 aaKnown RBP23.31■■□□□ 1.32
CD9-202ENST00000382515 TMOD3Q9NYL9 352 aa23.31■■□□□ 1.32
CD9-202ENST00000382515 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
CD9-202ENST00000382515 SMARCC1Q92922 1105 aaPredicted RBP23.3■■□□□ 1.32
CD9-202ENST00000382515 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
CD9-202ENST00000382515 MIER1Q8N108 512 aa23.28■■□□□ 1.32
CD9-202ENST00000382515 LGR6Q9HBX8 967 aa23.28■■□□□ 1.32
CD9-202ENST00000382515 RIPK4P57078 832 aa23.27■■□□□ 1.32
CD9-202ENST00000382515 NGEFQ8N5V2 710 aa23.27■■□□□ 1.32
CD9-202ENST00000382515 IL17REQ8NFR9 667 aa23.27■■□□□ 1.32
CD9-202ENST00000382515 PIGBQ92521 554 aa23.27■■□□□ 1.32
CD9-202ENST00000382515 SLC52A2Q9HAB3 445 aa23.27■■□□□ 1.32
CD9-202ENST00000382515 TEFQ10587 303 aa23.26■■□□□ 1.31
CD9-202ENST00000382515 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
CD9-202ENST00000382515 NFATC2IPQ8NCF5 419 aa23.26■■□□□ 1.31
CD9-202ENST00000382515 CAMKK2Q96RR4 588 aa23.25■■□□□ 1.31
CD9-202ENST00000382515 PTF1AQ7RTS3 328 aa23.24■■□□□ 1.31
CD9-202ENST00000382515 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
CD9-202ENST00000382515 CEMIPQ8WUJ3 1361 aa23.24■■□□□ 1.31
CD9-202ENST00000382515 KDM6AO15550 1401 aaPredicted RBP23.24■■□□□ 1.31
CD9-202ENST00000382515 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
CD9-202ENST00000382515 APAF1O14727 1248 aa23.22■■□□□ 1.31
CD9-202ENST00000382515 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
CD9-202ENST00000382515 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
CD9-202ENST00000382515 DEFB132Q7Z7B7 95 aa23.22■■□□□ 1.31
CD9-202ENST00000382515 TAF7Q15545 349 aaPredicted RBP23.2■■□□□ 1.3
CD9-202ENST00000382515 BABAM1Q9NWV8 329 aa23.2■■□□□ 1.3
CD9-202ENST00000382515 CALD1Q05682 793 aaKnown RBP23.19■■□□□ 1.3
CD9-202ENST00000382515 CCDC27Q2M243 656 aa23.19■■□□□ 1.3
CD9-202ENST00000382515 MCM10Q7L590 875 aa23.19■■□□□ 1.3
CD9-202ENST00000382515 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
CD9-202ENST00000382515 EZH2Q15910 746 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms