RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 COG3Q96JB2 828 aa31.89■■■□□ 2.7
VLDLR-201ENST00000382096 HOXC9P31274 260 aa31.88■■■□□ 2.69
VLDLR-201ENST00000382096 NSD2O96028 1365 aa31.87■■■□□ 2.69
VLDLR-201ENST00000382096 MEGF6O75095 1541 aa31.86■■■□□ 2.69
VLDLR-201ENST00000382096 PNPLA7Q6ZV29 1317 aa31.86■■■□□ 2.69
VLDLR-201ENST00000382096 RTL1A6NKG5 1358 aa31.84■■■□□ 2.69
VLDLR-201ENST00000382096 PRIM1P49642 420 aaKnown RBP31.84■■■□□ 2.69
VLDLR-201ENST00000382096 AMPHP49418 695 aa31.83■■■□□ 2.69
VLDLR-201ENST00000382096 SYTL4Q96C24 671 aaPredicted RBP31.83■■■□□ 2.69
VLDLR-201ENST00000382096 ZCRB1Q8TBF4 217 aaKnown RBP31.81■■■□□ 2.68
VLDLR-201ENST00000382096 TFCP2L1Q9NZI6 479 aa31.81■■■□□ 2.68
VLDLR-201ENST00000382096 FBLN1P23142 703 aa31.8■■■□□ 2.68
VLDLR-201ENST00000382096 POLD1P28340 1107 aa31.8■■■□□ 2.68
VLDLR-201ENST00000382096 KIF20BQ96Q89 1820 aa31.79■■■□□ 2.68
VLDLR-201ENST00000382096 KCNQ4P56696 695 aa31.79■■■□□ 2.68
VLDLR-201ENST00000382096 C5P01031 1676 aa31.77■■■□□ 2.68
VLDLR-201ENST00000382096 GPR162Q16538 588 aa31.77■■■□□ 2.68
VLDLR-201ENST00000382096 USP47Q96K76 1375 aa31.76■■■□□ 2.67
VLDLR-201ENST00000382096 CGNL1Q0VF96 1302 aa31.75■■■□□ 2.67
VLDLR-201ENST00000382096 TAF1LQ8IZX4 1826 aa31.75■■■□□ 2.67
VLDLR-201ENST00000382096 NBPF6Q5VWK0 638 aa31.73■■■□□ 2.67
VLDLR-201ENST00000382096 KLHL34Q8N239 644 aa31.73■■■□□ 2.67
VLDLR-201ENST00000382096 NBPF4Q96M43 638 aa31.73■■■□□ 2.67
VLDLR-201ENST00000382096 CCNL1Q9UK58 526 aaPredicted RBP31.73■■■□□ 2.67
VLDLR-201ENST00000382096 SMG6Q86US8 1419 aaKnown RBP31.73■■■□□ 2.67
VLDLR-201ENST00000382096 RRS1Q15050 365 aaKnown RBP31.72■■■□□ 2.67
VLDLR-201ENST00000382096 TIMELESSQ9UNS1 1208 aa31.72■■■□□ 2.67
VLDLR-201ENST00000382096 FYB1O15117 783 aa31.71■■■□□ 2.67
VLDLR-201ENST00000382096 TMF1P82094 1093 aa31.71■■■□□ 2.67
VLDLR-201ENST00000382096 ITGB4P16144 1822 aa31.69■■■□□ 2.66
VLDLR-201ENST00000382096 CLSPNQ9HAW4 1339 aa31.69■■■□□ 2.66
VLDLR-201ENST00000382096 C1QTNF8P60827 252 aa31.68■■■□□ 2.66
VLDLR-201ENST00000382096 NLGN2Q8NFZ4 835 aa31.68■■■□□ 2.66
VLDLR-201ENST00000382096 GGNBP2Q9H3C7 697 aa31.68■■■□□ 2.66
VLDLR-201ENST00000382096 USHBP1Q8N6Y0 703 aa31.67■■■□□ 2.66
VLDLR-201ENST00000382096 RAPGEF4Q8WZA2 1011 aa31.67■■■□□ 2.66
VLDLR-201ENST00000382096 PKD1L3Q7Z443 1732 aa31.66■■■□□ 2.66
VLDLR-201ENST00000382096 TOGARAM1Q9Y4F4 1720 aa31.66■■■□□ 2.66
VLDLR-201ENST00000382096 INSRP06213 1382 aa31.66■■■□□ 2.66
VLDLR-201ENST00000382096 KIF24Q5T7B8 1368 aa31.65■■■□□ 2.66
VLDLR-201ENST00000382096 COL23A1Q86Y22 540 aaPredicted RBP31.64■■■□□ 2.66
VLDLR-201ENST00000382096 PELP1Q8IZL8 1130 aaKnown RBP31.63■■■□□ 2.65
VLDLR-201ENST00000382096 PCDH11XQ9BZA7 1347 aa31.63■■■□□ 2.65
VLDLR-201ENST00000382096 PCDH11YQ9BZA8 1340 aa31.63■■■□□ 2.65
VLDLR-201ENST00000382096 FLT4P35916 1363 aa31.63■■■□□ 2.65
VLDLR-201ENST00000382096 TATP17735 454 aaPredicted RBP31.62■■■□□ 2.65
VLDLR-201ENST00000382096 CDCA8Q53HL2 280 aa31.62■■■□□ 2.65
VLDLR-201ENST00000382096 ANKRD26Q9UPS8 1709 aa31.62■■■□□ 2.65
VLDLR-201ENST00000382096 SENP3-EIF4A1A0A087X0R7 540 aa31.61■■■□□ 2.65
VLDLR-201ENST00000382096 MSH5O43196 834 aa31.6■■■□□ 2.65
VLDLR-201ENST00000382096 HSP90AB2PQ58FF8 381 aa31.6■■■□□ 2.65
VLDLR-201ENST00000382096 C4BP0C0L5 1744 aa31.6■■■□□ 2.65
VLDLR-201ENST00000382096 UBR3Q6ZT12 1888 aa31.59■■■□□ 2.65
VLDLR-201ENST00000382096 PALLDQ8WX93 1383 aa31.57■■■□□ 2.64
VLDLR-201ENST00000382096 YBX3P16989 372 aaKnown RBP eCLIP31.57■■■□□ 2.64
VLDLR-201ENST00000382096 HMGB2P26583 209 aaKnown RBP31.57■■■□□ 2.64
VLDLR-201ENST00000382096 NCAPD2Q15021 1401 aa31.56■■■□□ 2.64
VLDLR-201ENST00000382096 GRIN3BO60391 1043 aa31.55■■■□□ 2.64
VLDLR-201ENST00000382096 GIGYF1O75420 1035 aaPredicted RBP31.55■■■□□ 2.64
VLDLR-201ENST00000382096 CYP27B1O15528 508 aa31.54■■■□□ 2.64
VLDLR-201ENST00000382096 MSL1Q68DK7 614 aa31.54■■■□□ 2.64
VLDLR-201ENST00000382096 FLAD1Q8NFF5 587 aa31.54■■■□□ 2.64
VLDLR-201ENST00000382096 MAP2P11137 1827 aaKnown RBP31.54■■■□□ 2.64
VLDLR-201ENST00000382096 PCGF6Q9BYE7 350 aa31.52■■■□□ 2.64
VLDLR-201ENST00000382096 MPRIPQ6WCQ1 1025 aa31.51■■■□□ 2.63
VLDLR-201ENST00000382096 CEP350Q5VT06 3117 aa31.51■■■□□ 2.63
VLDLR-201ENST00000382096 CD2APQ9Y5K6 639 aa31.49■■■□□ 2.63
VLDLR-201ENST00000382096 SMARCC1Q92922 1105 aaPredicted RBP31.48■■■□□ 2.63
VLDLR-201ENST00000382096 CARD14Q9BXL6 1004 aa31.48■■■□□ 2.63
VLDLR-201ENST00000382096 NSD3Q9BZ95 1437 aa31.48■■■□□ 2.63
VLDLR-201ENST00000382096 EMILIN1Q9Y6C2 1016 aa31.47■■■□□ 2.63
VLDLR-201ENST00000382096 NKX1-1Q15270 411 aaPredicted RBP31.44■■■□□ 2.62
VLDLR-201ENST00000382096 AK7Q96M32 723 aa31.43■■■□□ 2.62
VLDLR-201ENST00000382096 AMIGO3Q86WK7 504 aa31.42■■■□□ 2.62
VLDLR-201ENST00000382096 PIGBQ92521 554 aa31.42■■■□□ 2.62
VLDLR-201ENST00000382096 ATP10DQ9P241 1426 aa31.41■■■□□ 2.62
VLDLR-201ENST00000382096 SPG7Q9UQ90 795 aa31.4■■■□□ 2.62
VLDLR-201ENST00000382096 WASHC2AQ641Q2 1341 aa31.39■■■□□ 2.62
VLDLR-201ENST00000382096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.37■■■□□ 2.61
VLDLR-201ENST00000382096 ADCY9O60503 1353 aa31.37■■■□□ 2.61
VLDLR-201ENST00000382096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.36■■■□□ 2.61
VLDLR-201ENST00000382096 PPM1GO15355 546 aaPredicted RBP31.36■■■□□ 2.61
VLDLR-201ENST00000382096 SSFA2P28290 1259 aa31.36■■■□□ 2.61
VLDLR-201ENST00000382096 LOC102724428A0A0B4J2F2 783 aa31.35■■■□□ 2.61
VLDLR-201ENST00000382096 PHF14O94880 888 aa31.35■■■□□ 2.61
VLDLR-201ENST00000382096 SIK1P57059 783 aa31.35■■■□□ 2.61
VLDLR-201ENST00000382096 EYA1Q99502 592 aa31.34■■■□□ 2.61
VLDLR-201ENST00000382096 ZNF831Q5JPB2 1677 aa31.34■■■□□ 2.61
VLDLR-201ENST00000382096 KIF13BQ9NQT8 1826 aa31.33■■■□□ 2.61
VLDLR-201ENST00000382096 LINC00116Q8NCU8 138 aa31.33■■■□□ 2.61
VLDLR-201ENST00000382096 SMIM5Q71RC9 77 aa31.32■■■□□ 2.6
VLDLR-201ENST00000382096 TMOD3Q9NYL9 352 aa31.32■■■□□ 2.6
VLDLR-201ENST00000382096 PLEKHG2Q9H7P9 1386 aa31.31■■■□□ 2.6
VLDLR-201ENST00000382096 IGSF1Q8N6C5 1336 aa31.31■■■□□ 2.6
VLDLR-201ENST00000382096 PHKG2P15735 406 aa31.29■■■□□ 2.6
VLDLR-201ENST00000382096 POLKQ9UBT6 870 aa31.29■■■□□ 2.6
VLDLR-201ENST00000382096 ASAP1Q9ULH1 1129 aa31.29■■■□□ 2.6
VLDLR-201ENST00000382096 CICQ96RK0 1608 aaPredicted RBP31.28■■■□□ 2.6
VLDLR-201ENST00000382096 EIF4G2P78344 907 aaKnown RBP eCLIP31.28■■■□□ 2.6
VLDLR-201ENST00000382096 IFNL2Q8IZJ0 200 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms