RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 TNS1Q9HBL0 1735 aaKnown RBP26.13■■□□□ 1.77
GTF3A-201ENST00000381140 IGSF1Q8N6C5 1336 aa26.13■■□□□ 1.77
GTF3A-201ENST00000381140 DIAPH1O60610 1272 aaKnown RBP26.12■■□□□ 1.77
GTF3A-201ENST00000381140 CCDC125Q86Z20 511 aa26.11■■□□□ 1.77
GTF3A-201ENST00000381140 CFAP53Q96M91 514 aa26.11■■□□□ 1.77
GTF3A-201ENST00000381140 COL3A1P02461 1466 aaPredicted RBP26.11■■□□□ 1.77
GTF3A-201ENST00000381140 PKD1L3Q7Z443 1732 aa26.11■■□□□ 1.77
GTF3A-201ENST00000381140 AEBP1Q8IUX7 1158 aa26.09■■□□□ 1.77
GTF3A-201ENST00000381140 SULT6B1Q6IMI4 303 aa26.08■■□□□ 1.77
GTF3A-201ENST00000381140 U2SURPO15042 1029 aaKnown RBP26.07■■□□□ 1.76
GTF3A-201ENST00000381140 HMOX1P09601 288 aa26.06■■□□□ 1.76
GTF3A-201ENST00000381140 RALBP1Q15311 655 aa26.06■■□□□ 1.76
GTF3A-201ENST00000381140 DEFB132Q7Z7B7 95 aa26.06■■□□□ 1.76
GTF3A-201ENST00000381140 ACSBG1Q96GR2 724 aa26.06■■□□□ 1.76
GTF3A-201ENST00000381140 DOT1LQ8TEK3 1739 aa26.05■■□□□ 1.76
GTF3A-201ENST00000381140 SPG7Q9UQ90 795 aa26.04■■□□□ 1.76
GTF3A-201ENST00000381140 PCDH11XQ9BZA7 1347 aa26.04■■□□□ 1.76
GTF3A-201ENST00000381140 PCDH11YQ9BZA8 1340 aa26.04■■□□□ 1.76
GTF3A-201ENST00000381140 NHSQ6T4R5 1651 aa26.03■■□□□ 1.76
GTF3A-201ENST00000381140 APBA3O96018 575 aa26.02■■□□□ 1.76
GTF3A-201ENST00000381140 BAG6P46379 1132 aa26.02■■□□□ 1.76
GTF3A-201ENST00000381140 PTF1AQ7RTS3 328 aa26.02■■□□□ 1.76
GTF3A-201ENST00000381140 BCL9O00512 1426 aa26.01■■□□□ 1.75
GTF3A-201ENST00000381140 KDRP35968 1356 aa25.99■■□□□ 1.75
GTF3A-201ENST00000381140 CYP27B1O15528 508 aa25.99■■□□□ 1.75
GTF3A-201ENST00000381140 KCNQ2O43526 872 aa25.99■■□□□ 1.75
GTF3A-201ENST00000381140 EN1Q05925 392 aaPredicted RBP25.99■■□□□ 1.75
GTF3A-201ENST00000381140 NUDCQ9Y266 331 aa25.99■■□□□ 1.75
GTF3A-201ENST00000381140 BTAF1O14981 1849 aa25.99■■□□□ 1.75
GTF3A-201ENST00000381140 MYBBP1AQ9BQG0 1328 aaKnown RBP25.98■■□□□ 1.75
GTF3A-201ENST00000381140 PLEKHO1Q53GL0 409 aaPredicted RBP25.98■■□□□ 1.75
GTF3A-201ENST00000381140 SYTL4Q96C24 671 aaPredicted RBP25.98■■□□□ 1.75
GTF3A-201ENST00000381140 BCL11BQ9C0K0 894 aaPredicted RBP25.98■■□□□ 1.75
GTF3A-201ENST00000381140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.97■■□□□ 1.751e-6■■□□□ 11.9
GTF3A-201ENST00000381140 PRKRIP1Q9H875 184 aaPredicted RBP25.96■■□□□ 1.75
GTF3A-201ENST00000381140 ITGB4P16144 1822 aa25.96■■□□□ 1.75
GTF3A-201ENST00000381140 ZNF530Q6P9A1 599 aaPredicted RBP25.95■■□□□ 1.75
GTF3A-201ENST00000381140 TOGARAM1Q9Y4F4 1720 aa25.95■■□□□ 1.74
GTF3A-201ENST00000381140 U2AF1L5P0DN76 240 aaPredicted RBP25.95■■□□□ 1.74
GTF3A-201ENST00000381140 U2AF1Q01081 240 aaKnown RBP eCLIP25.95■■□□□ 1.74
GTF3A-201ENST00000381140 PRIM1P49642 420 aaKnown RBP25.94■■□□□ 1.74
GTF3A-201ENST00000381140 AMOTQ4VCS5 1084 aa25.94■■□□□ 1.74
GTF3A-201ENST00000381140 IFNL2Q8IZJ0 200 aa25.94■■□□□ 1.74
GTF3A-201ENST00000381140 PHKG2P15735 406 aa25.93■■□□□ 1.74
GTF3A-201ENST00000381140 DIEXFQ68CQ4 756 aaKnown RBP25.93■■□□□ 1.74
GTF3A-201ENST00000381140 VIRMAQ69YN4 1812 aaKnown RBP25.92■■□□□ 1.74
GTF3A-201ENST00000381140 EZH2Q15910 746 aaKnown RBP25.92■■□□□ 1.74
GTF3A-201ENST00000381140 PLEKHG2Q9H7P9 1386 aa25.92■■□□□ 1.74
GTF3A-201ENST00000381140 C1orf141Q5JVX7 400 aa25.9■■□□□ 1.74
GTF3A-201ENST00000381140 RGPD3A6NKT7 1758 aaPredicted RBP25.88■■□□□ 1.73
GTF3A-201ENST00000381140 RGPD4Q7Z3J3 1758 aa25.88■■□□□ 1.73
GTF3A-201ENST00000381140 PRKAR2BP31323 418 aa25.88■■□□□ 1.73
GTF3A-201ENST00000381140 CAMKK2Q96RR4 588 aa25.88■■□□□ 1.73
GTF3A-201ENST00000381140 RREB1Q92766 1687 aa25.88■■□□□ 1.73
GTF3A-201ENST00000381140 NKX1-1Q15270 411 aaPredicted RBP25.86■■□□□ 1.73
GTF3A-201ENST00000381140 MPRIPQ6WCQ1 1025 aa25.86■■□□□ 1.73
GTF3A-201ENST00000381140 RSPH6AQ9H0K4 717 aa25.86■■□□□ 1.73
GTF3A-201ENST00000381140 ANP32CO43423 234 aa25.85■■□□□ 1.73
GTF3A-201ENST00000381140 MTHFSDQ2M296 383 aaKnown RBP25.85■■□□□ 1.73
GTF3A-201ENST00000381140 NUP188Q5SRE5 1749 aa25.85■■□□□ 1.73
GTF3A-201ENST00000381140 SCN11AQ9UI33 1791 aa25.85■■□□□ 1.73
GTF3A-201ENST00000381140 PLSCR1O15162 318 aa25.83■■□□□ 1.73
GTF3A-201ENST00000381140 HSP90AB1P08238 724 aaKnown RBP25.83■■□□□ 1.73
GTF3A-201ENST00000381140 FCHSD2O94868 740 aa25.82■■□□□ 1.72
GTF3A-201ENST00000381140 DCAF5Q96JK2 942 aa25.82■■□□□ 1.72
GTF3A-201ENST00000381140 PHACTR3Q96KR7 559 aa25.82■■□□□ 1.72
GTF3A-201ENST00000381140 KDM6AO15550 1401 aaPredicted RBP25.81■■□□□ 1.72
GTF3A-201ENST00000381140 AKAP4Q5JQC9 854 aa25.81■■□□□ 1.72
GTF3A-201ENST00000381140 TMOD3Q9NYL9 352 aa25.81■■□□□ 1.72
GTF3A-201ENST00000381140 TXNRD1Q16881 649 aa25.79■■□□□ 1.72
GTF3A-201ENST00000381140 GAS2L2Q8NHY3 880 aa25.79■■□□□ 1.72
GTF3A-201ENST00000381140 LY75O60449 1722 aa25.78■■□□□ 1.72
GTF3A-201ENST00000381140 WDR43Q15061 677 aaKnown RBP eCLIP25.78■■□□□ 1.72
GTF3A-201ENST00000381140 PIGBQ92521 554 aa25.78■■□□□ 1.72
GTF3A-201ENST00000381140 DLG5Q8TDM6 1919 aa25.77■■□□□ 1.72
GTF3A-201ENST00000381140 NEFMP07197 916 aa25.77■■□□□ 1.72
GTF3A-201ENST00000381140 CABP4P57796 275 aa25.76■■□□□ 1.71
GTF3A-201ENST00000381140 PROM2Q8N271 834 aa25.76■■□□□ 1.71
GTF3A-201ENST00000381140 MAP3K5Q99683 1374 aa25.75■■□□□ 1.71
GTF3A-201ENST00000381140 ERVV-2B6SEH9 535 aa25.75■■□□□ 1.71
GTF3A-201ENST00000381140 LGR6Q9HBX8 967 aa25.74■■□□□ 1.71
GTF3A-201ENST00000381140 GNAT3A8MTJ3 354 aa25.73■■□□□ 1.71
GTF3A-201ENST00000381140 RNMTO43148 476 aaKnown RBP25.73■■□□□ 1.71
GTF3A-201ENST00000381140 KCNQ4P56696 695 aa25.73■■□□□ 1.71
GTF3A-201ENST00000381140 CCDC184Q52MB2 194 aa25.73■■□□□ 1.71
GTF3A-201ENST00000381140 MAPK8IP3Q9UPT6 1336 aa25.72■■□□□ 1.71
GTF3A-201ENST00000381140 PSDA5PKW4 1024 aaPredicted RBP25.72■■□□□ 1.71
GTF3A-201ENST00000381140 PNNQ9H307 717 aaKnown RBP25.72■■□□□ 1.71
GTF3A-201ENST00000381140 PALLDQ8WX93 1383 aa25.72■■□□□ 1.71
GTF3A-201ENST00000381140 NBPF14Q5TI25 921 aa25.71■■□□□ 1.71
GTF3A-201ENST00000381140 ADAMTS7Q9UKP4 1686 aa25.71■■□□□ 1.71
GTF3A-201ENST00000381140 NFATC2IPQ8NCF5 419 aa25.7■■□□□ 1.71
GTF3A-201ENST00000381140 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.71
GTF3A-201ENST00000381140 ASAP1Q9ULH1 1129 aa25.7■■□□□ 1.71
GTF3A-201ENST00000381140 CCDC146Q8IYE0 955 aa25.69■■□□□ 1.7
GTF3A-201ENST00000381140 PLEKHF1Q96S99 279 aa25.69■■□□□ 1.7
GTF3A-201ENST00000381140 CCNL1Q9UK58 526 aaPredicted RBP25.69■■□□□ 1.7
GTF3A-201ENST00000381140 R3HDM1Q15032 1099 aaKnown RBP25.69■■□□□ 1.7
GTF3A-201ENST00000381140 LRRC4BQ9NT99 713 aa25.69■■□□□ 1.7
GTF3A-201ENST00000381140 MRS2Q9HD23 443 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms