RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
CLCN4-201ENST00000380829 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
CLCN4-201ENST00000380829 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
CLCN4-201ENST00000380829 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
CLCN4-201ENST00000380829 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
CLCN4-201ENST00000380829 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
CLCN4-201ENST00000380829 KDM4FA0A1W2PPD8 638 aa18.09■□□□□ 0.49
CLCN4-201ENST00000380829 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
CLCN4-201ENST00000380829 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.49
CLCN4-201ENST00000380829 CHL1O00533 1208 aa18.07■□□□□ 0.48
CLCN4-201ENST00000380829 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
CLCN4-201ENST00000380829 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
CLCN4-201ENST00000380829 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
CLCN4-201ENST00000380829 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
CLCN4-201ENST00000380829 LTN1O94822 1766 aa18.06■□□□□ 0.48
CLCN4-201ENST00000380829 LMOD2Q6P5Q4 547 aa18.06■□□□□ 0.48
CLCN4-201ENST00000380829 CRB1P82279 1406 aa18.06■□□□□ 0.48
CLCN4-201ENST00000380829 NFAT5O94916 1531 aa18.05■□□□□ 0.48
CLCN4-201ENST00000380829 C8orf34Q49A92 452 aa18.05■□□□□ 0.48
CLCN4-201ENST00000380829 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
CLCN4-201ENST00000380829 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
CLCN4-201ENST00000380829 HSPA2P54652 639 aa18.04■□□□□ 0.48
CLCN4-201ENST00000380829 FAM161AQ3B820 660 aa18.04■□□□□ 0.48
CLCN4-201ENST00000380829 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
CLCN4-201ENST00000380829 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
CLCN4-201ENST00000380829 ZBTB40Q9NUA8 1239 aa18.04■□□□□ 0.48
CLCN4-201ENST00000380829 IP6K1Q92551 441 aa18.03■□□□□ 0.48
CLCN4-201ENST00000380829 ARHGAP45Q92619 1136 aa18.03■□□□□ 0.48
CLCN4-201ENST00000380829 DDRGK1Q96HY6 314 aa18.03■□□□□ 0.48
CLCN4-201ENST00000380829 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
CLCN4-201ENST00000380829 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.48
CLCN4-201ENST00000380829 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
CLCN4-201ENST00000380829 TSPYL4Q9UJ04 414 aa18.01■□□□□ 0.47
CLCN4-201ENST00000380829 TMEM94Q12767 1356 aa18.01■□□□□ 0.47
CLCN4-201ENST00000380829 KRT28Q7Z3Y7 464 aa18.01■□□□□ 0.47
CLCN4-201ENST00000380829 FAM43AQ8N2R8 423 aa18.01■□□□□ 0.47
CLCN4-201ENST00000380829 GCP02774 474 aa18■□□□□ 0.47
CLCN4-201ENST00000380829 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
CLCN4-201ENST00000380829 NBPF4Q96M43 638 aa18■□□□□ 0.47
CLCN4-201ENST00000380829 ABCC4O15439 1325 aa18■□□□□ 0.47
CLCN4-201ENST00000380829 KIAA0232Q92628 1395 aa17.99■□□□□ 0.47
CLCN4-201ENST00000380829 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
CLCN4-201ENST00000380829 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
CLCN4-201ENST00000380829 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
CLCN4-201ENST00000380829 STRCP1A6NGW2 1772 aa17.99■□□□□ 0.47
CLCN4-201ENST00000380829 ATF3P18847 181 aa17.99■□□□□ 0.47
CLCN4-201ENST00000380829 ZBTB7BO15156 539 aaPredicted RBP17.98■□□□□ 0.47
CLCN4-201ENST00000380829 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
CLCN4-201ENST00000380829 DDX17Q92841 729 aaKnown RBP17.98■□□□□ 0.47
CLCN4-201ENST00000380829 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
CLCN4-201ENST00000380829 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
CLCN4-201ENST00000380829 MSH6P52701 1360 aa17.97■□□□□ 0.47
CLCN4-201ENST00000380829 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
CLCN4-201ENST00000380829 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
CLCN4-201ENST00000380829 TRPM3Q9HCF6 1732 aaPredicted RBP17.97■□□□□ 0.47
CLCN4-201ENST00000380829 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
CLCN4-201ENST00000380829 IL17REQ8NFR9 667 aa17.96■□□□□ 0.47
CLCN4-201ENST00000380829 MST1RQ04912 1400 aa17.96■□□□□ 0.47
CLCN4-201ENST00000380829 HTATSF1O43719 755 aaKnown RBP17.96■□□□□ 0.46
CLCN4-201ENST00000380829 SLIT3O75094 1523 aa17.95■□□□□ 0.46
CLCN4-201ENST00000380829 KIF1AQ12756 1690 aa17.95■□□□□ 0.46
CLCN4-201ENST00000380829 USP19O94966 1318 aa17.94■□□□□ 0.46
CLCN4-201ENST00000380829 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
CLCN4-201ENST00000380829 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
CLCN4-201ENST00000380829 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
CLCN4-201ENST00000380829 SMC5Q8IY18 1101 aa17.93■□□□□ 0.46
CLCN4-201ENST00000380829 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
CLCN4-201ENST00000380829 AXIN2Q9Y2T1 843 aa17.92■□□□□ 0.46
CLCN4-201ENST00000380829 RGS12O14924 1447 aa17.92■□□□□ 0.46
CLCN4-201ENST00000380829 CHMP4BQ9H444 224 aaKnown RBP17.92■□□□□ 0.46
CLCN4-201ENST00000380829 ZC3H6P61129 1189 aaKnown RBP17.91■□□□□ 0.46
CLCN4-201ENST00000380829 ANKRD24Q8TF21 1146 aa17.91■□□□□ 0.46
CLCN4-201ENST00000380829 RRAGDQ9NQL2 400 aaPredicted RBP17.91■□□□□ 0.46
CLCN4-201ENST00000380829 DCCP43146 1447 aa17.9■□□□□ 0.46
CLCN4-201ENST00000380829 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
CLCN4-201ENST00000380829 G2E3Q7L622 706 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 PTPRCP08575 1304 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 SEC24BO95487 1268 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.45
CLCN4-201ENST00000380829 CADPS2Q86UW7 1296 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 VSIG10Q8N0Z9 540 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 LGR6Q9HBX8 967 aa17.89■□□□□ 0.45
CLCN4-201ENST00000380829 ALS2Q96Q42 1657 aa17.88■□□□□ 0.45
CLCN4-201ENST00000380829 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
CLCN4-201ENST00000380829 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
CLCN4-201ENST00000380829 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
CLCN4-201ENST00000380829 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
CLCN4-201ENST00000380829 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
CLCN4-201ENST00000380829 LNPKQ9C0E8 428 aa17.87■□□□□ 0.45
CLCN4-201ENST00000380829 NUCB1Q02818 461 aa17.87■□□□□ 0.45
CLCN4-201ENST00000380829 ZMYND15Q9H091 742 aa17.87■□□□□ 0.45
CLCN4-201ENST00000380829 F6X3S4 739 aa17.86■□□□□ 0.45
CLCN4-201ENST00000380829 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
CLCN4-201ENST00000380829 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
CLCN4-201ENST00000380829 STK31Q9BXU1 1019 aa17.86■□□□□ 0.45
CLCN4-201ENST00000380829 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
CLCN4-201ENST00000380829 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
CLCN4-201ENST00000380829 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
CLCN4-201ENST00000380829 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms