RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 BRPF1P55201 1214 aaPredicted RBP15.27■□□□□ 0.03
USP3-202ENST00000380324 ERICH6Q7L0X2 663 aa15.27■□□□□ 0.03
USP3-202ENST00000380324 RWDD1Q9H446 243 aaPredicted RBP15.27■□□□□ 0.03
USP3-202ENST00000380324 TMEM94Q12767 1356 aa15.27■□□□□ 0.03
USP3-202ENST00000380324 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
USP3-202ENST00000380324 FAM161AQ3B820 660 aa15.26■□□□□ 0.03
USP3-202ENST00000380324 C8orf34Q49A92 452 aa15.26■□□□□ 0.03
USP3-202ENST00000380324 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
USP3-202ENST00000380324 KCNH5Q8NCM2 988 aa15.25■□□□□ 0.03
USP3-202ENST00000380324 IP6K1Q92551 441 aa15.25■□□□□ 0.03
USP3-202ENST00000380324 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
USP3-202ENST00000380324 TSPYL4Q9UJ04 414 aa15.25■□□□□ 0.03
USP3-202ENST00000380324 PHRF1Q9P1Y6 1649 aaKnown RBP15.24■□□□□ 0.03
USP3-202ENST00000380324 PDZRN3Q9UPQ7 1066 aa15.24■□□□□ 0.03
USP3-202ENST00000380324 ATF3P18847 181 aa15.23■□□□□ 0.03
USP3-202ENST00000380324 SLIT3O75094 1523 aa15.23■□□□□ 0.03
USP3-202ENST00000380324 KRT28Q7Z3Y7 464 aa15.23■□□□□ 0.03
USP3-202ENST00000380324 IPO9Q96P70 1041 aaKnown RBP15.23■□□□□ 0.03
USP3-202ENST00000380324 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 ABCC4O15439 1325 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 GNAT3A8MTJ3 354 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 GCP02774 474 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 LRRC59Q96AG4 307 aaKnown RBP15.22■□□□□ 0.03
USP3-202ENST00000380324 MST1RQ04912 1400 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 MSH6P52701 1360 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 DDX17Q92841 729 aaKnown RBP15.22■□□□□ 0.03
USP3-202ENST00000380324 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 ANP32EQ9BTT0 268 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 C1orf115Q9H7X2 142 aa15.22■□□□□ 0.03
USP3-202ENST00000380324 NOP58Q9Y2X3 529 aaKnown RBP15.21■□□□□ 0.03
USP3-202ENST00000380324 ALS2Q96Q42 1657 aa15.21■□□□□ 0.02
USP3-202ENST00000380324 RGPD5Q99666 1765 aa15.21■□□□□ 0.02
USP3-202ENST00000380324 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
USP3-202ENST00000380324 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
USP3-202ENST00000380324 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
USP3-202ENST00000380324 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
USP3-202ENST00000380324 USP19O94966 1318 aa15.19■□□□□ 0.02
USP3-202ENST00000380324 ZBTB7BO15156 539 aaPredicted RBP15.18■□□□□ 0.02
USP3-202ENST00000380324 DCCP43146 1447 aa15.18■□□□□ 0.02
USP3-202ENST00000380324 RGS12O14924 1447 aa15.18■□□□□ 0.02
USP3-202ENST00000380324 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
USP3-202ENST00000380324 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
USP3-202ENST00000380324 FAM208AQ9UK61 1670 aaKnown RBP15.17■□□□□ 0.02
USP3-202ENST00000380324 XIRP1Q702N8 1843 aaKnown RBP15.17■□□□□ 0.02
USP3-202ENST00000380324 MED1Q15648 1581 aaPredicted RBP15.17■□□□□ 0.02
USP3-202ENST00000380324 ANKRD24Q8TF21 1146 aa15.16■□□□□ 0.02
USP3-202ENST00000380324 LMTK3Q96Q04 1460 aa15.16■□□□□ 0.02
USP3-202ENST00000380324 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
USP3-202ENST00000380324 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
USP3-202ENST00000380324 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
USP3-202ENST00000380324 SMC5Q8IY18 1101 aa15.15■□□□□ 0.02
USP3-202ENST00000380324 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
USP3-202ENST00000380324 AXIN2Q9Y2T1 843 aa15.15■□□□□ 0.02
USP3-202ENST00000380324 STRCQ7RTU9 1775 aa15.15■□□□□ 0.02
USP3-202ENST00000380324 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
USP3-202ENST00000380324 NECTIN2Q92692 538 aa15.15■□□□□ 0.02
USP3-202ENST00000380324 PXDNQ92626 1479 aa15.14■□□□□ 0.01
USP3-202ENST00000380324 LMO7Q8WWI1 1683 aa15.14■□□□□ 0.01
USP3-202ENST00000380324 PTPRCP08575 1304 aa15.13■□□□□ 0.01
USP3-202ENST00000380324 ZNF530Q6P9A1 599 aaPredicted RBP15.13■□□□□ 0.01
USP3-202ENST00000380324 CAMTA1Q9Y6Y1 1673 aa15.13■□□□□ 0.01
USP3-202ENST00000380324 NCOA3Q9Y6Q9 1424 aa15.13■□□□□ 0.01
USP3-202ENST00000380324 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
USP3-202ENST00000380324 TAF7Q15545 349 aaPredicted RBP15.12■□□□□ 0.01
USP3-202ENST00000380324 G2E3Q7L622 706 aa15.12■□□□□ 0.01
USP3-202ENST00000380324 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
USP3-202ENST00000380324 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
USP3-202ENST00000380324 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
USP3-202ENST00000380324 LNPKQ9C0E8 428 aa15.12■□□□□ 0.01
USP3-202ENST00000380324 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
USP3-202ENST00000380324 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 F6X3S4 739 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 SEC24BO95487 1268 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 SLC4A10Q6U841 1118 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 ERBB3P21860 1342 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 TNS3Q68CZ2 1445 aa15.11■□□□□ 0.01
USP3-202ENST00000380324 CACNA1FO60840 1977 aa15.1■□□□□ 0.01
USP3-202ENST00000380324 NCAPD2Q15021 1401 aa15.1■□□□□ 0.01
USP3-202ENST00000380324 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
USP3-202ENST00000380324 KDM3BQ7LBC6 1761 aa15.1■□□□□ 0.01
USP3-202ENST00000380324 NUCB1Q02818 461 aa15.1■□□□□ 0.01
USP3-202ENST00000380324 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
USP3-202ENST00000380324 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
USP3-202ENST00000380324 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
USP3-202ENST00000380324 C1orf141Q5JVX7 400 aa15.09■□□□□ 0.01
USP3-202ENST00000380324 CCDC30Q5VVM6 783 aa15.09■□□□□ 0.01
USP3-202ENST00000380324 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
USP3-202ENST00000380324 MEIS3Q99687 375 aa15.09■□□□□ 0.01
USP3-202ENST00000380324 ATP10DQ9P241 1426 aa15.08■□□□□ 0.01
USP3-202ENST00000380324 CRYBG1Q9Y4K1 1723 aa15.08■□□□□ 0
USP3-202ENST00000380324 TEFQ10587 303 aa15.08■□□□□ 0
USP3-202ENST00000380324 DDRGK1Q96HY6 314 aa15.08■□□□□ 0
USP3-202ENST00000380324 FLIIQ13045 1269 aa15.08■□□□□ 0
USP3-202ENST00000380324 FKBP5Q13451 457 aaPredicted RBP15.08■□□□□ 0
USP3-202ENST00000380324 ANKRD45Q5TZF3 282 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms