RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 KIF13AQ9H1H9 1805 aa10.78□□□□□ -0.68
TRIM6-203ENST00000380107 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.68
TRIM6-203ENST00000380107 CEP85Q6P2H3 762 aa10.77□□□□□ -0.68
TRIM6-203ENST00000380107 NOL8Q76FK4 1167 aaKnown RBP10.77□□□□□ -0.68
TRIM6-203ENST00000380107 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.68
TRIM6-203ENST00000380107 RICTORQ6R327 1708 aa10.77□□□□□ -0.69
TRIM6-203ENST00000380107 FOXO3O43524 673 aa10.77□□□□□ -0.69
TRIM6-203ENST00000380107 SKOR2Q2VWA4 1001 aaPredicted RBP10.77□□□□□ -0.69
TRIM6-203ENST00000380107 METP08581 1390 aa10.77□□□□□ -0.69
TRIM6-203ENST00000380107 GOLGA6L22H0YM25 854 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 EIF4A2Q14240 407 aaKnown RBP10.76□□□□□ -0.69
TRIM6-203ENST00000380107 ATP10DQ9P241 1426 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 HSP90AB2PQ58FF8 381 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 G2E3Q7L622 706 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 DIP2BQ9P265 1576 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 NEO1Q92859 1461 aa10.76□□□□□ -0.69
TRIM6-203ENST00000380107 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
TRIM6-203ENST00000380107 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
TRIM6-203ENST00000380107 RABEP1Q15276 862 aa10.75□□□□□ -0.69
TRIM6-203ENST00000380107 ATP7BP35670 1465 aa10.75□□□□□ -0.69
TRIM6-203ENST00000380107 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
TRIM6-203ENST00000380107 FOXD4L6Q3SYB3 417 aaPredicted RBP10.75□□□□□ -0.69
TRIM6-203ENST00000380107 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
TRIM6-203ENST00000380107 FOXD4L3Q6VB84 417 aaPredicted RBP10.75□□□□□ -0.69
TRIM6-203ENST00000380107 RGS12O14924 1447 aa10.75□□□□□ -0.69
TRIM6-203ENST00000380107 CPSF1Q10570 1443 aaKnown RBP10.75□□□□□ -0.69
TRIM6-203ENST00000380107 EDC4Q6P2E9 1401 aaKnown RBP10.75□□□□□ -0.69
TRIM6-203ENST00000380107 KLHL40Q2TBA0 621 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
TRIM6-203ENST00000380107 LMBRD1Q9NUN5 540 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
TRIM6-203ENST00000380107 ZDHHC9Q9Y397 364 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 PRR36Q9H6K5 1346 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 RTL1A6NKG5 1358 aa10.74□□□□□ -0.69
TRIM6-203ENST00000380107 ZSCAN23Q3MJ62 389 aa10.73□□□□□ -0.69
TRIM6-203ENST00000380107 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
TRIM6-203ENST00000380107 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
TRIM6-203ENST00000380107 RBSNQ9H1K0 784 aa10.73□□□□□ -0.69
TRIM6-203ENST00000380107 CHL1O00533 1208 aa10.72□□□□□ -0.69
TRIM6-203ENST00000380107 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
TRIM6-203ENST00000380107 GPT2Q8TD30 523 aa10.72□□□□□ -0.69
TRIM6-203ENST00000380107 A2ML1A8K2U0 1454 aa10.72□□□□□ -0.69
TRIM6-203ENST00000380107 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRIM6-203ENST00000380107 CYP2E1P05181 493 aaPredicted RBP10.72□□□□□ -0.69
TRIM6-203ENST00000380107 NEK4P51957 841 aa10.72□□□□□ -0.69
TRIM6-203ENST00000380107 RPAP2Q8IXW5 612 aaPredicted RBP10.72□□□□□ -0.69
TRIM6-203ENST00000380107 ST18O60284 1047 aa10.71□□□□□ -0.69
TRIM6-203ENST00000380107 CCDC173Q0VFZ6 552 aa10.71□□□□□ -0.69
TRIM6-203ENST00000380107 HSP90AA2PQ14568 343 aaPredicted RBP10.71□□□□□ -0.69
TRIM6-203ENST00000380107 TSPOAP1O95153 1857 aa10.71□□□□□ -0.7
TRIM6-203ENST00000380107 ZBTB7CA1YPR0 619 aa10.71□□□□□ -0.7
TRIM6-203ENST00000380107 DTNBO60941 627 aa10.71□□□□□ -0.7
TRIM6-203ENST00000380107 NUCB2P80303 420 aa10.71□□□□□ -0.7
TRIM6-203ENST00000380107 CASC1Q6TDU7 716 aa10.71□□□□□ -0.7
TRIM6-203ENST00000380107 PALD1Q9ULE6 856 aa10.71□□□□□ -0.7
TRIM6-203ENST00000380107 AATKQ6ZMQ8 1374 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 PDE1AP54750 535 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 FAM69CQ0P6D2 419 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 CLEC17AQ6ZS10 378 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 RNF214Q8ND24 703 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 ANP32BQ92688 251 aaKnown RBP10.7□□□□□ -0.7
TRIM6-203ENST00000380107 RILPL2Q969X0 211 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 RIMS1Q86UR5 1692 aaKnown RBP10.7□□□□□ -0.7
TRIM6-203ENST00000380107 SYCE3A1L190 88 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 ERC2O15083 957 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 PTMSP20962 102 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 KIAA1211Q6ZU35 1233 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
TRIM6-203ENST00000380107 SETD1AO15047 1707 aaKnown RBP10.69□□□□□ -0.7
TRIM6-203ENST00000380107 MTHFSDQ2M296 383 aaKnown RBP10.69□□□□□ -0.7
TRIM6-203ENST00000380107 PPP1R9BQ96SB3 815 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 ACEP12821 1306 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 PNMA6EA0A0J9YXQ4 647 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 REC8O95072 547 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 MAP4K4O95819 1239 aaPredicted RBP10.69□□□□□ -0.7
TRIM6-203ENST00000380107 MPNDQ8N594 471 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 TMX3Q96JJ7 454 aa10.69□□□□□ -0.7
TRIM6-203ENST00000380107 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
TRIM6-203ENST00000380107 MAP3K19Q56UN5 1328 aa10.68□□□□□ -0.7
TRIM6-203ENST00000380107 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
TRIM6-203ENST00000380107 ZSCAN30Q86W11 494 aa10.68□□□□□ -0.7
TRIM6-203ENST00000380107 UNC5CLQ8IV45 518 aa10.68□□□□□ -0.7
TRIM6-203ENST00000380107 MSNP26038 577 aaKnown RBP10.68□□□□□ -0.7
TRIM6-203ENST00000380107 ZNF445P59923 1031 aa10.68□□□□□ -0.7
TRIM6-203ENST00000380107 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
TRIM6-203ENST00000380107 ANO2Q9NQ90 1003 aa10.68□□□□□ -0.7
TRIM6-203ENST00000380107 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
TRIM6-203ENST00000380107 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
TRIM6-203ENST00000380107 IL25Q9H293 177 aa10.67□□□□□ -0.7
TRIM6-203ENST00000380107 KIF24Q5T7B8 1368 aa10.67□□□□□ -0.7
TRIM6-203ENST00000380107 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
TRIM6-203ENST00000380107 PTPRCP08575 1304 aa10.67□□□□□ -0.7
TRIM6-203ENST00000380107 ROBO2Q9HCK4 1378 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms