RNA–Protein interactions for RNA: ENST00000379817.6

APTX-204, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 2,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-204ENST00000379817 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
APTX-204ENST00000379817 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
APTX-204ENST00000379817 RLBP1P12271 317 aa13.32□□□□□ -0.28
APTX-204ENST00000379817 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
APTX-204ENST00000379817 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
APTX-204ENST00000379817 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
APTX-204ENST00000379817 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
APTX-204ENST00000379817 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 TRIM27P14373 513 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
APTX-204ENST00000379817 CRB1P82279 1406 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
APTX-204ENST00000379817 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
APTX-204ENST00000379817 C8orf58Q8NAV2 365 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
APTX-204ENST00000379817 ELL2O00472 640 aaPredicted RBP13.3□□□□□ -0.28
APTX-204ENST00000379817 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
APTX-204ENST00000379817 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
APTX-204ENST00000379817 USHBP1Q8N6Y0 703 aa13.3□□□□□ -0.28
APTX-204ENST00000379817 ARHGAP45Q92619 1136 aa13.3□□□□□ -0.28
APTX-204ENST00000379817 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
APTX-204ENST00000379817 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
APTX-204ENST00000379817 SPATA31A3Q5VYP0 1347 aa13.29□□□□□ -0.28
APTX-204ENST00000379817 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
APTX-204ENST00000379817 MRPL50Q8N5N7 158 aaKnown RBP13.29□□□□□ -0.28
APTX-204ENST00000379817 ANKRD24Q8TF21 1146 aa13.29□□□□□ -0.28
APTX-204ENST00000379817 PXDNQ92626 1479 aa13.29□□□□□ -0.28
APTX-204ENST00000379817 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
APTX-204ENST00000379817 MED1Q15648 1581 aaPredicted RBP13.28□□□□□ -0.28
APTX-204ENST00000379817 ZC3H6P61129 1189 aaKnown RBP13.28□□□□□ -0.28
APTX-204ENST00000379817 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
APTX-204ENST00000379817 DDX19BQ9UMR2 479 aa13.28□□□□□ -0.28
APTX-204ENST00000379817 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
APTX-204ENST00000379817 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
APTX-204ENST00000379817 BABAM1Q9NWV8 329 aa13.27□□□□□ -0.29
APTX-204ENST00000379817 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
APTX-204ENST00000379817 NCAPD2Q15021 1401 aa13.26□□□□□ -0.29
APTX-204ENST00000379817 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
APTX-204ENST00000379817 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
APTX-204ENST00000379817 IGHDP01880 384 aa13.25□□□□□ -0.29
APTX-204ENST00000379817 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
APTX-204ENST00000379817 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
APTX-204ENST00000379817 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
APTX-204ENST00000379817 ERBB3P21860 1342 aa13.24□□□□□ -0.29
APTX-204ENST00000379817 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
APTX-204ENST00000379817 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
APTX-204ENST00000379817 SOS2Q07890 1332 aaPredicted RBP13.24□□□□□ -0.29
APTX-204ENST00000379817 API5Q9BZZ5 524 aaKnown RBP13.24□□□□□ -0.29
APTX-204ENST00000379817 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
APTX-204ENST00000379817 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
APTX-204ENST00000379817 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
APTX-204ENST00000379817 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
APTX-204ENST00000379817 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
APTX-204ENST00000379817 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
APTX-204ENST00000379817 CPDO75976 1380 aa13.22□□□□□ -0.29
APTX-204ENST00000379817 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
APTX-204ENST00000379817 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
APTX-204ENST00000379817 ABCC6O95255 1503 aa13.22□□□□□ -0.29
APTX-204ENST00000379817 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
APTX-204ENST00000379817 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
APTX-204ENST00000379817 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
APTX-204ENST00000379817 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.29
APTX-204ENST00000379817 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.3
APTX-204ENST00000379817 ILDR1Q86SU0 546 aaPredicted RBP13.21□□□□□ -0.3
APTX-204ENST00000379817 BCL11AQ9H165 835 aa13.21□□□□□ -0.3
APTX-204ENST00000379817 ABCC4O15439 1325 aa13.2□□□□□ -0.3
APTX-204ENST00000379817 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
APTX-204ENST00000379817 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 PTPRCP08575 1304 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 COL18A1P39060 1754 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
APTX-204ENST00000379817 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
APTX-204ENST00000379817 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
APTX-204ENST00000379817 TEFQ10587 303 aa13.18□□□□□ -0.3
APTX-204ENST00000379817 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
APTX-204ENST00000379817 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
APTX-204ENST00000379817 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
APTX-204ENST00000379817 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
APTX-204ENST00000379817 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
APTX-204ENST00000379817 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
APTX-204ENST00000379817 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
APTX-204ENST00000379817 PDE4AP27815 886 aa13.17□□□□□ -0.3
APTX-204ENST00000379817 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
APTX-204ENST00000379817 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
APTX-204ENST00000379817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■□□□□ 10.8
APTX-204ENST00000379817 OVOS2A0A0G2JMS6 1433 aa13.17□□□□□ -0.3
APTX-204ENST00000379817 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
APTX-204ENST00000379817 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
APTX-204ENST00000379817 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
APTX-204ENST00000379817 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
APTX-204ENST00000379817 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
APTX-204ENST00000379817 BACH2Q9BYV9 841 aa13.15□□□□□ -0.3
APTX-204ENST00000379817 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms