RNA–Protein interactions for RNA: ENST00000379649.5

UFM1-202, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 4 BASIC

Gene UFM1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-202ENST00000379649 CHD4Q14839 1912 aa19.88■□□□□ 0.77
UFM1-202ENST00000379649 KCNQ4P56696 695 aa19.87■□□□□ 0.77
UFM1-202ENST00000379649 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
UFM1-202ENST00000379649 USP47Q96K76 1375 aa19.86■□□□□ 0.77
UFM1-202ENST00000379649 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
UFM1-202ENST00000379649 NBPF6Q5VWK0 638 aa19.86■□□□□ 0.77
UFM1-202ENST00000379649 NBPF4Q96M43 638 aa19.86■□□□□ 0.77
UFM1-202ENST00000379649 USHBP1Q8N6Y0 703 aa19.85■□□□□ 0.77
UFM1-202ENST00000379649 RTL1A6NKG5 1358 aa19.84■□□□□ 0.77
UFM1-202ENST00000379649 GOLGB1Q14789 3259 aaKnown RBP19.84■□□□□ 0.77
UFM1-202ENST00000379649 SLC24A1O60721 1099 aa19.84■□□□□ 0.77
UFM1-202ENST00000379649 ZCRB1Q8TBF4 217 aaKnown RBP19.84■□□□□ 0.77
UFM1-202ENST00000379649 ARXQ96QS3 562 aa19.84■□□□□ 0.77
UFM1-202ENST00000379649 TMF1P82094 1093 aa19.83■□□□□ 0.77
UFM1-202ENST00000379649 SLC27A3Q5K4L6 730 aa19.83■□□□□ 0.77
UFM1-202ENST00000379649 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
UFM1-202ENST00000379649 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
UFM1-202ENST00000379649 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
UFM1-202ENST00000379649 ITGB4P16144 1822 aa19.8■□□□□ 0.76
UFM1-202ENST00000379649 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
UFM1-202ENST00000379649 CARD14Q9BXL6 1004 aa19.79■□□□□ 0.76
UFM1-202ENST00000379649 MAP3K5Q99683 1374 aa19.79■□□□□ 0.76
UFM1-202ENST00000379649 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
UFM1-202ENST00000379649 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
UFM1-202ENST00000379649 MAP2P11137 1827 aaKnown RBP19.78■□□□□ 0.76
UFM1-202ENST00000379649 INSRP06213 1382 aa19.77■□□□□ 0.76
UFM1-202ENST00000379649 C5P01031 1676 aa19.77■□□□□ 0.76
UFM1-202ENST00000379649 SLC16A10Q8TF71 515 aa19.76■□□□□ 0.75
UFM1-202ENST00000379649 TFCP2L1Q9NZI6 479 aa19.76■□□□□ 0.75
UFM1-202ENST00000379649 PKD1L3Q7Z443 1732 aa19.76■□□□□ 0.75
UFM1-202ENST00000379649 ANKRD26Q9UPS8 1709 aa19.76■□□□□ 0.75
UFM1-202ENST00000379649 CCNL1Q9UK58 526 aaPredicted RBP19.75■□□□□ 0.75
UFM1-202ENST00000379649 SMG6Q86US8 1419 aaKnown RBP19.75■□□□□ 0.75
UFM1-202ENST00000379649 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
UFM1-202ENST00000379649 FLT4P35916 1363 aa19.74■□□□□ 0.75
UFM1-202ENST00000379649 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
UFM1-202ENST00000379649 ZNF784Q8NCA9 323 aaPredicted RBP19.74■□□□□ 0.75
UFM1-202ENST00000379649 RAPGEF4Q8WZA2 1011 aa19.74■□□□□ 0.75
UFM1-202ENST00000379649 EMILIN1Q9Y6C2 1016 aa19.74■□□□□ 0.75
UFM1-202ENST00000379649 NSD3Q9BZ95 1437 aa19.74■□□□□ 0.75
UFM1-202ENST00000379649 CYP27B1O15528 508 aa19.72■□□□□ 0.75
UFM1-202ENST00000379649 KIF24Q5T7B8 1368 aa19.71■□□□□ 0.75
UFM1-202ENST00000379649 CDCA8Q53HL2 280 aa19.71■□□□□ 0.75
UFM1-202ENST00000379649 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
UFM1-202ENST00000379649 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
UFM1-202ENST00000379649 NCAPD2Q15021 1401 aa19.7■□□□□ 0.74
UFM1-202ENST00000379649 POLD1P28340 1107 aa19.7■□□□□ 0.74
UFM1-202ENST00000379649 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
UFM1-202ENST00000379649 PCDH11XQ9BZA7 1347 aa19.69■□□□□ 0.74
UFM1-202ENST00000379649 PCDH11YQ9BZA8 1340 aa19.69■□□□□ 0.74
UFM1-202ENST00000379649 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
UFM1-202ENST00000379649 GPR162Q16538 588 aa19.67■□□□□ 0.74
UFM1-202ENST00000379649 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
UFM1-202ENST00000379649 C4BP0C0L5 1744 aa19.67■□□□□ 0.74
UFM1-202ENST00000379649 MSH5O43196 834 aa19.66■□□□□ 0.74
UFM1-202ENST00000379649 MSL1Q68DK7 614 aa19.66■□□□□ 0.74
UFM1-202ENST00000379649 PALLDQ8WX93 1383 aa19.66■□□□□ 0.74
UFM1-202ENST00000379649 PPM1GO15355 546 aaPredicted RBP19.64■□□□□ 0.73
UFM1-202ENST00000379649 AMIGO3Q86WK7 504 aa19.64■□□□□ 0.73
UFM1-202ENST00000379649 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
UFM1-202ENST00000379649 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
UFM1-202ENST00000379649 PIGBQ92521 554 aa19.63■□□□□ 0.73
UFM1-202ENST00000379649 EYA1Q99502 592 aa19.63■□□□□ 0.73
UFM1-202ENST00000379649 NKX1-1Q15270 411 aaPredicted RBP19.62■□□□□ 0.73
UFM1-202ENST00000379649 SMIM5Q71RC9 77 aa19.62■□□□□ 0.73
UFM1-202ENST00000379649 POLKQ9UBT6 870 aa19.62■□□□□ 0.73
UFM1-202ENST00000379649 YBX3P16989 372 aaKnown RBP eCLIP19.61■□□□□ 0.73
UFM1-202ENST00000379649 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
UFM1-202ENST00000379649 SMARCC1Q92922 1105 aaPredicted RBP19.58■□□□□ 0.72
UFM1-202ENST00000379649 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
UFM1-202ENST00000379649 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
UFM1-202ENST00000379649 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
UFM1-202ENST00000379649 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
UFM1-202ENST00000379649 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
UFM1-202ENST00000379649 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
UFM1-202ENST00000379649 FLAD1Q8NFF5 587 aa19.56■□□□□ 0.72
UFM1-202ENST00000379649 PHKG2P15735 406 aa19.55■□□□□ 0.72
UFM1-202ENST00000379649 AK7Q96M32 723 aa19.55■□□□□ 0.72
UFM1-202ENST00000379649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.55■□□□□ 0.72
UFM1-202ENST00000379649 ASAP1Q9ULH1 1129 aa19.55■□□□□ 0.72
UFM1-202ENST00000379649 LOC102724428A0A0B4J2F2 783 aa19.54■□□□□ 0.72
UFM1-202ENST00000379649 PHF14O94880 888 aa19.54■□□□□ 0.72
UFM1-202ENST00000379649 SIK1P57059 783 aa19.54■□□□□ 0.72
UFM1-202ENST00000379649 C1QTNF8P60827 252 aa19.54■□□□□ 0.72
UFM1-202ENST00000379649 ITPK1Q13572 414 aa19.54■□□□□ 0.72
UFM1-202ENST00000379649 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
UFM1-202ENST00000379649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.53■□□□□ 0.72
UFM1-202ENST00000379649 TMOD3Q9NYL9 352 aa19.53■□□□□ 0.72
UFM1-202ENST00000379649 CD2APQ9Y5K6 639 aa19.53■□□□□ 0.72
UFM1-202ENST00000379649 CEP350Q5VT06 3117 aa19.52■□□□□ 0.72
UFM1-202ENST00000379649 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.72
UFM1-202ENST00000379649 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
UFM1-202ENST00000379649 ATG3Q9NT62 314 aa19.52■□□□□ 0.72
UFM1-202ENST00000379649 PANK3Q9H999 370 aa19.51■□□□□ 0.71
UFM1-202ENST00000379649 GRIN3BO60391 1043 aa19.5■□□□□ 0.71
UFM1-202ENST00000379649 COL5A3P25940 1745 aaPredicted RBP19.5■□□□□ 0.71
UFM1-202ENST00000379649 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
UFM1-202ENST00000379649 HMGB2P26583 209 aaKnown RBP19.49■□□□□ 0.71
UFM1-202ENST00000379649 SSFA2P28290 1259 aa19.49■□□□□ 0.71
UFM1-202ENST00000379649 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms