RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 HMGB2P26583 209 aaKnown RBP9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 RIPK4P57078 832 aa9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 OTUD7AQ8TE49 926 aaPredicted RBP9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 RXRBP28702 533 aa9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 VPS72Q15906 364 aa9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
GPCPD1-201ENST00000379019 ARID3AQ99856 593 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 ACEP12821 1306 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 AFF2P51816 1311 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 MPNDQ8N594 471 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 CDCA7Q9BWT1 371 aaPredicted RBP9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 NSD2O96028 1365 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 FOXO3O43524 673 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 UNC5CLQ8IV45 518 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 LMO7Q8WWI1 1683 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
GPCPD1-201ENST00000379019 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
GPCPD1-201ENST00000379019 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
GPCPD1-201ENST00000379019 MTHFSP49914 203 aa9.37□□□□□ -0.91
GPCPD1-201ENST00000379019 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
GPCPD1-201ENST00000379019 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
GPCPD1-201ENST00000379019 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
GPCPD1-201ENST00000379019 FAM177BA6PVY3 158 aa9.36□□□□□ -0.91
GPCPD1-201ENST00000379019 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
GPCPD1-201ENST00000379019 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
GPCPD1-201ENST00000379019 KRT24Q2M2I5 525 aa9.36□□□□□ -0.91
GPCPD1-201ENST00000379019 TNPO1Q92973 898 aaKnown RBP9.36□□□□□ -0.91
GPCPD1-201ENST00000379019 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
GPCPD1-201ENST00000379019 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 USP21Q9UK80 565 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 TRAK2O60296 914 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 THSD7AQ9UPZ6 1657 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 BCL9LQ86UU0 1499 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 IL25Q9H293 177 aa9.35□□□□□ -0.91
GPCPD1-201ENST00000379019 SSFA2P28290 1259 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 TMEM57Q8N5G2 664 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 NSD3Q9BZ95 1437 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 RBM10P98175 930 aaKnown RBP9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 ZDHHC9Q9Y397 364 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 TTC21BQ7Z4L5 1316 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 WDR43Q15061 677 aaKnown RBP eCLIP9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 LNPKQ9C0E8 428 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 BARGINQ6ZT62 677 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 PRDM4Q9UKN5 801 aa9.34□□□□□ -0.91
GPCPD1-201ENST00000379019 BCL9O00512 1426 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 KIF20BQ96Q89 1820 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 ANKRD26Q9UPS8 1709 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 NFAT5O94916 1531 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 PKNOX2Q96KN3 472 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 CD163L1Q9NR16 1453 aa9.33□□□□□ -0.92
GPCPD1-201ENST00000379019 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 WNK3Q9BYP7 1800 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 OVOS2A0A0J9YW53 1432 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 OVOS2Q6IE36 1432 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 PARP4Q9UKK3 1724 aaKnown RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 CGNL1Q0VF96 1302 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 ZGPATQ8N5A5 531 aaKnown RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 DDRGK1Q96HY6 314 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 COL3A1P02461 1466 aaPredicted RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 PLEKHG5O94827 1062 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 NUTM2BA6NNL0 878 aaPredicted RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 NUTM2EB1AL46 878 aaPredicted RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 NUTM2AQ8IVF1 878 aaPredicted RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 CABP2Q9NPB3 220 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
GPCPD1-201ENST00000379019 RGPD3A6NKT7 1758 aaPredicted RBP9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 RGPD4Q7Z3J3 1758 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 RGPD1P0DJD0 1748 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 CLCN1P35523 988 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 GLI3P10071 1580 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 NOB1Q9ULX3 412 aaKnown RBP9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 COL18A1P39060 1754 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 TSHZ3Q63HK5 1081 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 C22orf23Q9BZE7 217 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 RGS12O14924 1447 aa9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 C17orf53Q8N3J3 647 aaPredicted RBP9.31□□□□□ -0.92
GPCPD1-201ENST00000379019 CRB1P82279 1406 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 GRPEL1Q9HAV7 217 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 SPATA31A5Q5VU36 1347 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 SPATA31A7Q8IWB4 1347 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 TUBGCP6Q96RT7 1819 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms