RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TPM3P06753 285 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 ZNF853P0CG23 659 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 NFE2L2Q16236 605 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 C14orf37Q86TY3 774 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 CCDC94Q9BW85 323 aaPredicted RBP10.03□□□□□ -0.8
PTPRR-203ENST00000378778 SSH2Q76I76 1423 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRR-203ENST00000378778 MYRIPQ8NFW9 859 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 ERCC6L2Q5T890 1561 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 ATP7BP35670 1465 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 ANAPC15P60006 121 aa10.03□□□□□ -0.8
PTPRR-203ENST00000378778 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
PTPRR-203ENST00000378778 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
PTPRR-203ENST00000378778 OSBPL3Q9H4L5 887 aa10.02□□□□□ -0.81
PTPRR-203ENST00000378778 ANKRD44Q8N8A2 993 aa10.02□□□□□ -0.81
PTPRR-203ENST00000378778 GTPBP4Q9BZE4 634 aaKnown RBP10.02□□□□□ -0.81
PTPRR-203ENST00000378778 TSPY26PQ9H489 355 aa10.02□□□□□ -0.81
PTPRR-203ENST00000378778 CD163L1Q9NR16 1453 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 CDK12Q9NYV4 1490 aaPredicted RBP10.01□□□□□ -0.81
PTPRR-203ENST00000378778 AK9Q5TCS8 1911 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 CUL4AQ13619 759 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 FAM13BQ9NYF5 915 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 KNDC1Q76NI1 1749 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 DLC1Q96QB1 1528 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 ERC2O15083 957 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
PTPRR-203ENST00000378778 SIRT2Q8IXJ6 389 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 GPT2Q8TD30 523 aa10.01□□□□□ -0.81
PTPRR-203ENST00000378778 PTPRMP28827 1452 aa10□□□□□ -0.81
PTPRR-203ENST00000378778 FYB1O15117 783 aa10□□□□□ -0.81
PTPRR-203ENST00000378778 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
PTPRR-203ENST00000378778 MCCP23508 829 aa10□□□□□ -0.81
PTPRR-203ENST00000378778 BRD1O95696 1058 aa10□□□□□ -0.81
PTPRR-203ENST00000378778 TMEM87AQ8NBN3 555 aa10□□□□□ -0.81
PTPRR-203ENST00000378778 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
PTPRR-203ENST00000378778 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
PTPRR-203ENST00000378778 PIBF1Q8WXW3 757 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 AATKQ6ZMQ8 1374 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 PTPRCP08575 1304 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 HMMRO75330 724 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 XPCQ01831 940 aaPredicted RBP9.99□□□□□ -0.81
PTPRR-203ENST00000378778 DMTNQ08495 405 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 KIAA0232Q92628 1395 aa9.99□□□□□ -0.81
PTPRR-203ENST00000378778 DLG5Q8TDM6 1919 aa9.98□□□□□ -0.81
PTPRR-203ENST00000378778 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
PTPRR-203ENST00000378778 KIF20AO95235 890 aa9.98□□□□□ -0.81
PTPRR-203ENST00000378778 PDIA4P13667 645 aaKnown RBP9.98□□□□□ -0.81
PTPRR-203ENST00000378778 SPTLC3Q9NUV7 552 aa9.98□□□□□ -0.81
PTPRR-203ENST00000378778 TMEM63CQ9P1W3 806 aa9.98□□□□□ -0.81
PTPRR-203ENST00000378778 ZDHHC9Q9Y397 364 aa9.98□□□□□ -0.81
PTPRR-203ENST00000378778 PTMAP06454 111 aaKnown RBP9.97□□□□□ -0.81
PTPRR-203ENST00000378778 RBM10P98175 930 aaKnown RBP9.97□□□□□ -0.81
PTPRR-203ENST00000378778 TWISTNBQ3B726 338 aaPredicted RBP9.97□□□□□ -0.81
PTPRR-203ENST00000378778 RTL1A6NKG5 1358 aa9.97□□□□□ -0.81
PTPRR-203ENST00000378778 TAF3Q5VWG9 929 aa9.97□□□□□ -0.81
PTPRR-203ENST00000378778 MAP2P11137 1827 aaKnown RBP9.97□□□□□ -0.81
PTPRR-203ENST00000378778 ARHGEF40Q8TER5 1519 aa9.97□□□□□ -0.81
PTPRR-203ENST00000378778 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
PTPRR-203ENST00000378778 WDR33Q9C0J8 1336 aaKnown RBP9.96□□□□□ -0.81
PTPRR-203ENST00000378778 SIGLEC1Q9BZZ2 1709 aa9.96□□□□□ -0.81
PTPRR-203ENST00000378778 SYCP1Q15431 976 aa9.96□□□□□ -0.81
PTPRR-203ENST00000378778 DIAPH3Q9NSV4 1193 aa9.96□□□□□ -0.81
PTPRR-203ENST00000378778 SLC52A1Q9NWF4 448 aa9.96□□□□□ -0.81
PTPRR-203ENST00000378778 YTHDC2Q9H6S0 1430 aaKnown RBP9.96□□□□□ -0.81
PTPRR-203ENST00000378778 AOX1Q06278 1338 aa9.96□□□□□ -0.82
PTPRR-203ENST00000378778 SYCE3A1L190 88 aa9.96□□□□□ -0.82
PTPRR-203ENST00000378778 SDSP20132 328 aa9.96□□□□□ -0.82
PTPRR-203ENST00000378778 PRKAR2BP31323 418 aa9.96□□□□□ -0.82
PTPRR-203ENST00000378778 CABP2Q9NPB3 220 aa9.96□□□□□ -0.82
PTPRR-203ENST00000378778 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 RGS12O14924 1447 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 RIMS2Q9UQ26 1411 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 N4BP2Q86UW6 1770 aaPredicted RBP9.95□□□□□ -0.82
PTPRR-203ENST00000378778 ARHGEF10O15013 1369 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 CCDC183Q5T5S1 534 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 TMEM132EQ6IEE7 984 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 MBIPQ9NS73 344 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 USP25Q9UHP3 1055 aa9.95□□□□□ -0.82
PTPRR-203ENST00000378778 ITSN1Q15811 1721 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 SRPK2P78362 688 aaKnown RBP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 FKBP5Q13451 457 aaPredicted RBP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 EDC4Q6P2E9 1401 aaKnown RBP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 CHAF1AQ13111 956 aaPredicted RBP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRR-203ENST00000378778 CEP85Q6P2H3 762 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 KIF3AQ9Y496 699 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 ATP6V1DQ9Y5K8 247 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 TMEM131LA2VDJ0 1609 aa9.94□□□□□ -0.82
PTPRR-203ENST00000378778 GOLGA6L6A8MZA4 724 aa9.93□□□□□ -0.82
PTPRR-203ENST00000378778 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
PTPRR-203ENST00000378778 FEZ1Q99689 392 aa9.93□□□□□ -0.82
PTPRR-203ENST00000378778 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
PTPRR-203ENST00000378778 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms