RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 SRCIN1Q9C0H9 1055 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF39-201ENST00000378387 NRDCO43847 1150 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 CYP2E1P05181 493 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 UBE2HP62256 183 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 FOSBP53539 338 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 TFIP11Q9UBB9 837 aaKnown RBP12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 DDX41Q9UJV9 622 aaKnown RBP12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 PAXBP1Q9Y5B6 917 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 HNRNPH2P55795 449 aaKnown RBP12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 MAP3K11Q16584 847 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 KIF18AQ8NI77 898 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
ARHGEF39-201ENST00000378387 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
ARHGEF39-201ENST00000378387 FBLN1P23142 703 aa12.54□□□□□ -0.4
ARHGEF39-201ENST00000378387 GTF2A1P52655 376 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF39-201ENST00000378387 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
ARHGEF39-201ENST00000378387 GOLGA6L1Q8N7Z2 621 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 KCNF1Q9H3M0 494 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 STX6O43752 255 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 BMS1Q14692 1282 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 ANO6Q4KMQ2 910 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 ANKRD7Q92527 254 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 ARGLU1Q9NWB6 273 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 TROQ12816 1431 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
ARHGEF39-201ENST00000378387 KRBA2Q6ZNG9 492 aa12.52□□□□□ -0.4
ARHGEF39-201ENST00000378387 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.4
ARHGEF39-201ENST00000378387 NECTIN2Q92692 538 aa12.52□□□□□ -0.4
ARHGEF39-201ENST00000378387 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.4
ARHGEF39-201ENST00000378387 SPTLC3Q9NUV7 552 aa12.52□□□□□ -0.4
ARHGEF39-201ENST00000378387 PALD1Q9ULE6 856 aa12.52□□□□□ -0.4
ARHGEF39-201ENST00000378387 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 SOX12O15370 315 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 A2MP01023 1474 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 WDR7Q9Y4E6 1490 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 SKILP12757 684 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 ZNF165P49910 485 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 TMCO3Q6UWJ1 677 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 UBXN4Q92575 508 aa12.52□□□□□ -0.41
ARHGEF39-201ENST00000378387 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 ZSCAN22P10073 491 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 CPA1P15085 419 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 LMAN1P49257 510 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 DNAJC25Q9H1X3 360 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 RASSF4Q9H2L5 321 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
ARHGEF39-201ENST00000378387 TPM4P67936 248 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 FBXO38Q6PIJ6 1188 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 IQGAP2Q13576 1575 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 DNMT1P26358 1616 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 SYT1P21579 422 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 TYRO3Q06418 890 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-201ENST00000378387 KIF3BO15066 747 aa12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 GNAI1P63096 354 aa12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
ARHGEF39-201ENST00000378387 ARHGEF11O15085 1522 aa12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 KRT85P78386 507 aa12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 STK3Q13188 491 aa12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 SMC2O95347 1197 aa12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
ARHGEF39-201ENST00000378387 HSP90B1P14625 803 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 GJB2P29033 226 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 ARID5BQ14865 1188 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 NECAB1Q8N987 351 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 ADGRF5Q8IZF2 1346 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 AP5Z1O43299 807 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 F13A1P00488 732 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms