RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 ZNF771Q7L3S4 317 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA1-201ENST00000378105 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.25
PCDHGA1-201ENST00000378105 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA1-201ENST00000378105 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.26
PCDHGA1-201ENST00000378105 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
PCDHGA1-201ENST00000378105 PHLPP1O60346 1717 aa13.45□□□□□ -0.26
PCDHGA1-201ENST00000378105 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
PCDHGA1-201ENST00000378105 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
PCDHGA1-201ENST00000378105 TNRQ92752 1358 aa13.45□□□□□ -0.26
PCDHGA1-201ENST00000378105 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
PCDHGA1-201ENST00000378105 RIMS2Q9UQ26 1411 aa13.45□□□□□ -0.26
PCDHGA1-201ENST00000378105 MTHFSP49914 203 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 TMX1Q9H3N1 280 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 UQCRHLA0A096LP55 91 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 NPHP1O15259 732 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 UQCRHP07919 91 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 RCAN3Q9UKA8 241 aa13.44□□□□□ -0.26
PCDHGA1-201ENST00000378105 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
PCDHGA1-201ENST00000378105 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
PCDHGA1-201ENST00000378105 EVA1CP58658 441 aa13.43□□□□□ -0.26
PCDHGA1-201ENST00000378105 TSC1Q92574 1164 aa13.43□□□□□ -0.26
PCDHGA1-201ENST00000378105 MAP2P11137 1827 aaKnown RBP13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 PXDNQ92626 1479 aa13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 PSEN1P49768 467 aa13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 SLIT3O75094 1523 aa13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
PCDHGA1-201ENST00000378105 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 FAM135BQ49AJ0 1406 aa13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 PLEKHH1Q9ULM0 1364 aa13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 CASZ1Q86V15 1759 aa13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 APBB1O00213 710 aa13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
PCDHGA1-201ENST00000378105 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
PCDHGA1-201ENST00000378105 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
PCDHGA1-201ENST00000378105 KCNA4P22459 653 aa13.4□□□□□ -0.26
PCDHGA1-201ENST00000378105 HSPA2P54652 639 aa13.4□□□□□ -0.26
PCDHGA1-201ENST00000378105 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
PCDHGA1-201ENST00000378105 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
PCDHGA1-201ENST00000378105 FAM177BA6PVY3 158 aa13.39□□□□□ -0.27
PCDHGA1-201ENST00000378105 KIF20AO95235 890 aa13.39□□□□□ -0.27
PCDHGA1-201ENST00000378105 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
PCDHGA1-201ENST00000378105 SMC4Q9NTJ3 1288 aa13.39□□□□□ -0.27
PCDHGA1-201ENST00000378105 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 CICQ96RK0 1608 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 TOGARAM1Q9Y4F4 1720 aa13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 NLRP2Q9NX02 1062 aa13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
PCDHGA1-201ENST00000378105 PLIN1O60240 522 aa13.37□□□□□ -0.27
PCDHGA1-201ENST00000378105 PIP4K2BP78356 416 aa13.37□□□□□ -0.27
PCDHGA1-201ENST00000378105 YTHDC2Q9H6S0 1430 aaKnown RBP13.37□□□□□ -0.27
PCDHGA1-201ENST00000378105 IRF6O14896 467 aa13.37□□□□□ -0.27
PCDHGA1-201ENST00000378105 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
PCDHGA1-201ENST00000378105 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
PCDHGA1-201ENST00000378105 PTMSP20962 102 aa13.36□□□□□ -0.27
PCDHGA1-201ENST00000378105 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
PCDHGA1-201ENST00000378105 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
PCDHGA1-201ENST00000378105 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA1-201ENST00000378105 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
PCDHGA1-201ENST00000378105 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 FOXO3O43524 673 aa13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 SEMA3FQ13275 785 aa13.35□□□□□ -0.27
PCDHGA1-201ENST00000378105 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA1-201ENST00000378105 IQSEC2Q5JU85 1478 aa13.34□□□□□ -0.27
PCDHGA1-201ENST00000378105 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.27
PCDHGA1-201ENST00000378105 CCDC94Q9BW85 323 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA1-201ENST00000378105 STK31Q9BXU1 1019 aa13.33□□□□□ -0.28
PCDHGA1-201ENST00000378105 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
PCDHGA1-201ENST00000378105 TEFQ10587 303 aa13.33□□□□□ -0.28
PCDHGA1-201ENST00000378105 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.28
PCDHGA1-201ENST00000378105 TOMM22Q9NS69 142 aa13.33□□□□□ -0.28
PCDHGA1-201ENST00000378105 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 STRN4Q9NRL3 753 aa13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 C14orf93Q9H972 538 aaKnown RBP13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
PCDHGA1-201ENST00000378105 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
PCDHGA1-201ENST00000378105 EIF2S2P20042 333 aaKnown RBP13.31□□□□□ -0.28
PCDHGA1-201ENST00000378105 UBR2Q8IWV8 1755 aa13.31□□□□□ -0.28
PCDHGA1-201ENST00000378105 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms