RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 GPT2Q8TD30 523 aa22.16■■□□□ 1.14
GNE-201ENST00000377902 LMOD3Q0VAK6 560 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 MIS18AQ9NYP9 233 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 TSHZ3Q63HK5 1081 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 KIAA1211Q6ZU35 1233 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 ZSCAN30Q86W11 494 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 COG3Q96JB2 828 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 RGS12O14924 1447 aa22.15■■□□□ 1.14
GNE-201ENST00000377902 RRP9O43818 475 aaKnown RBP22.14■■□□□ 1.14
GNE-201ENST00000377902 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.14
GNE-201ENST00000377902 NSFL1CQ9UNZ2 370 aaKnown RBP22.14■■□□□ 1.14
GNE-201ENST00000377902 ATP7BP35670 1465 aa22.14■■□□□ 1.13
GNE-201ENST00000377902 ZNF445P59923 1031 aa22.14■■□□□ 1.13
GNE-201ENST00000377902 SULT6B1Q6IMI4 303 aa22.14■■□□□ 1.13
GNE-201ENST00000377902 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.13
GNE-201ENST00000377902 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
GNE-201ENST00000377902 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
GNE-201ENST00000377902 IBTKQ9P2D0 1353 aaPredicted RBP22.13■■□□□ 1.13
GNE-201ENST00000377902 CPSF1Q10570 1443 aaKnown RBP22.12■■□□□ 1.13
GNE-201ENST00000377902 CDK12Q9NYV4 1490 aaPredicted RBP22.12■■□□□ 1.13
GNE-201ENST00000377902 CPS1P31327 1500 aa22.12■■□□□ 1.13
GNE-201ENST00000377902 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
GNE-201ENST00000377902 VSIG10Q8N0Z9 540 aa22.12■■□□□ 1.13
GNE-201ENST00000377902 EDC4Q6P2E9 1401 aaKnown RBP22.11■■□□□ 1.13
GNE-201ENST00000377902 ST18O60284 1047 aa22.11■■□□□ 1.13
GNE-201ENST00000377902 NUDT16Q96DE0 195 aaKnown RBP22.11■■□□□ 1.13
GNE-201ENST00000377902 F6X3S4 739 aa22.1■■□□□ 1.13
GNE-201ENST00000377902 SLC4A10Q6U841 1118 aa22.1■■□□□ 1.13
GNE-201ENST00000377902 REREQ9P2R6 1566 aa22.1■■□□□ 1.13
GNE-201ENST00000377902 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
GNE-201ENST00000377902 SLC4A2P04920 1241 aa22.09■■□□□ 1.13
GNE-201ENST00000377902 MSNP26038 577 aaKnown RBP22.09■■□□□ 1.13
GNE-201ENST00000377902 EIF4A2Q14240 407 aaKnown RBP22.09■■□□□ 1.13
GNE-201ENST00000377902 CASC1Q6TDU7 716 aa22.09■■□□□ 1.13
GNE-201ENST00000377902 NEO1Q92859 1461 aa22.09■■□□□ 1.13
GNE-201ENST00000377902 CHL1O00533 1208 aa22.08■■□□□ 1.13
GNE-201ENST00000377902 NOL8Q76FK4 1167 aaKnown RBP22.08■■□□□ 1.13
GNE-201ENST00000377902 G2E3Q7L622 706 aa22.08■■□□□ 1.13
GNE-201ENST00000377902 TMEM63CQ9P1W3 806 aa22.08■■□□□ 1.13
GNE-201ENST00000377902 SOX12O15370 315 aa22.08■■□□□ 1.12
GNE-201ENST00000377902 CWC22Q9HCG8 908 aaKnown RBP22.08■■□□□ 1.12
GNE-201ENST00000377902 AATKQ6ZMQ8 1374 aa22.07■■□□□ 1.12
GNE-201ENST00000377902 SYCE3A1L190 88 aa22.07■■□□□ 1.12
GNE-201ENST00000377902 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.07■■□□□ 1.12
GNE-201ENST00000377902 ERC2O15083 957 aa22.06■■□□□ 1.12
GNE-201ENST00000377902 NEK4P51957 841 aa22.06■■□□□ 1.12
GNE-201ENST00000377902 GLIPR1L2Q4G1C9 344 aa22.06■■□□□ 1.12
GNE-201ENST00000377902 EXOC6BQ9Y2D4 811 aa22.06■■□□□ 1.12
GNE-201ENST00000377902 NUTM2FA1L443 756 aa22.05■■□□□ 1.12
GNE-201ENST00000377902 REC8O95072 547 aa22.05■■□□□ 1.12
GNE-201ENST00000377902 RICTORQ6R327 1708 aa22.05■■□□□ 1.12
GNE-201ENST00000377902 OFD1O75665 1012 aa22.05■■□□□ 1.12
GNE-201ENST00000377902 FOXD4L6Q3SYB3 417 aaPredicted RBP22.05■■□□□ 1.12
GNE-201ENST00000377902 FOXD4L3Q6VB84 417 aaPredicted RBP22.05■■□□□ 1.12
GNE-201ENST00000377902 METP08581 1390 aa22.05■■□□□ 1.12
GNE-201ENST00000377902 FOXO3O43524 673 aa22.04■■□□□ 1.12
GNE-201ENST00000377902 TPM2P07951 284 aa22.04■■□□□ 1.12
GNE-201ENST00000377902 PDE1AP54750 535 aa22.04■■□□□ 1.12
GNE-201ENST00000377902 XPCQ01831 940 aaPredicted RBP22.04■■□□□ 1.12
GNE-201ENST00000377902 TMX3Q96JJ7 454 aa22.04■■□□□ 1.12
GNE-201ENST00000377902 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
GNE-201ENST00000377902 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
GNE-201ENST00000377902 RNF214Q8ND24 703 aa22.03■■□□□ 1.12
GNE-201ENST00000377902 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.03■■□□□ 1.12
GNE-201ENST00000377902 RBM10P98175 930 aaKnown RBP22.03■■□□□ 1.12
GNE-201ENST00000377902 PALD1Q9ULE6 856 aa22.03■■□□□ 1.12
GNE-201ENST00000377902 MLECQ14165 292 aa22.02■■□□□ 1.12
GNE-201ENST00000377902 R3HCC1Q9Y3T6 440 aaKnown RBP22.02■■□□□ 1.12
GNE-201ENST00000377902 PDLIM2Q96JY6 352 aa22.01■■□□□ 1.11
GNE-201ENST00000377902 ZMYND15Q9H091 742 aa22.01■■□□□ 1.11
GNE-201ENST00000377902 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
GNE-201ENST00000377902 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
GNE-201ENST00000377902 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
GNE-201ENST00000377902 PRR36Q9H6K5 1346 aa22.01■■□□□ 1.11
GNE-201ENST00000377902 PTPRCP08575 1304 aa22■■□□□ 1.11
GNE-201ENST00000377902 A2ML1A8K2U0 1454 aa22■■□□□ 1.11
GNE-201ENST00000377902 NOL7Q9UMY1 257 aaKnown RBP22■■□□□ 1.11
GNE-201ENST00000377902 DLC1Q96QB1 1528 aa21.99■■□□□ 1.11
GNE-201ENST00000377902 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
GNE-201ENST00000377902 LRSAM1Q6UWE0 723 aa21.99■■□□□ 1.11
GNE-201ENST00000377902 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
GNE-201ENST00000377902 GDPD2Q9HCC8 539 aa21.98■■□□□ 1.11
GNE-201ENST00000377902 RILPL2Q969X0 211 aa21.97■■□□□ 1.11
GNE-201ENST00000377902 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.97■■□□□ 1.11
GNE-201ENST00000377902 HMMRO75330 724 aa21.96■■□□□ 1.11
GNE-201ENST00000377902 KIAA0232Q92628 1395 aa21.96■■□□□ 1.11
GNE-201ENST00000377902 PNMA6EA0A0J9YXQ4 647 aa21.96■■□□□ 1.11
GNE-201ENST00000377902 ESYT1Q9BSJ8 1104 aa21.96■■□□□ 1.11
GNE-201ENST00000377902 UPF3BQ9BZI7 483 aaKnown RBP21.96■■□□□ 1.11
GNE-201ENST00000377902 OSBPL3Q9H4L5 887 aa21.96■■□□□ 1.11
GNE-201ENST00000377902 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
GNE-201ENST00000377902 TPRNQ4KMQ1 711 aa21.95■■□□□ 1.11
GNE-201ENST00000377902 ANO2Q9NQ90 1003 aa21.95■■□□□ 1.11
GNE-201ENST00000377902 ZBTB7CA1YPR0 619 aa21.95■■□□□ 1.1
GNE-201ENST00000377902 TRIM6-TRIM34B2RNG4 842 aa21.95■■□□□ 1.1
GNE-201ENST00000377902 UNC5CLQ8IV45 518 aa21.95■■□□□ 1.1
GNE-201ENST00000377902 TSPYL4Q9UJ04 414 aa21.95■■□□□ 1.1
GNE-201ENST00000377902 CRB1P82279 1406 aa21.95■■□□□ 1.1
GNE-201ENST00000377902 HAP1P54257 671 aaPredicted RBP21.94■■□□□ 1.1
GNE-201ENST00000377902 MPNDQ8N594 471 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms