RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
KRT40-201ENST00000377755 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
KRT40-201ENST00000377755 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
KRT40-201ENST00000377755 MEGF6O75095 1541 aa17.02■□□□□ 0.32
KRT40-201ENST00000377755 SLIT2O94813 1529 aa17.02■□□□□ 0.32
KRT40-201ENST00000377755 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.31
KRT40-201ENST00000377755 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.31
KRT40-201ENST00000377755 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.31
KRT40-201ENST00000377755 NGLY1Q96IV0 654 aa17.02■□□□□ 0.31
KRT40-201ENST00000377755 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
KRT40-201ENST00000377755 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
KRT40-201ENST00000377755 NRAPQ86VF7 1730 aa17■□□□□ 0.31
KRT40-201ENST00000377755 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
KRT40-201ENST00000377755 MCM10Q7L590 875 aa17■□□□□ 0.31
KRT40-201ENST00000377755 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
KRT40-201ENST00000377755 E9PSI1 815 aa16.99■□□□□ 0.31
KRT40-201ENST00000377755 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
KRT40-201ENST00000377755 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
KRT40-201ENST00000377755 FNBP4Q8N3X1 1017 aaPredicted RBP16.98■□□□□ 0.31
KRT40-201ENST00000377755 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
KRT40-201ENST00000377755 IL2RBP14784 551 aa16.98■□□□□ 0.31
KRT40-201ENST00000377755 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
KRT40-201ENST00000377755 UNC5CLQ8IV45 518 aa16.98■□□□□ 0.31
KRT40-201ENST00000377755 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
KRT40-201ENST00000377755 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
KRT40-201ENST00000377755 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
KRT40-201ENST00000377755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.31
KRT40-201ENST00000377755 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.31
KRT40-201ENST00000377755 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
KRT40-201ENST00000377755 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
KRT40-201ENST00000377755 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
KRT40-201ENST00000377755 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
KRT40-201ENST00000377755 IL16Q14005 1332 aa16.96■□□□□ 0.31
KRT40-201ENST00000377755 FBXO41Q8TF61 875 aa16.96■□□□□ 0.3
KRT40-201ENST00000377755 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
KRT40-201ENST00000377755 PLEKHG2Q9H7P9 1386 aa16.95■□□□□ 0.3
KRT40-201ENST00000377755 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
KRT40-201ENST00000377755 C1orf141Q5JVX7 400 aa16.94■□□□□ 0.3
KRT40-201ENST00000377755 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
KRT40-201ENST00000377755 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
KRT40-201ENST00000377755 USP21Q9UK80 565 aa16.94■□□□□ 0.3
KRT40-201ENST00000377755 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
KRT40-201ENST00000377755 SPATA31A5Q5VU36 1347 aa16.94■□□□□ 0.3
KRT40-201ENST00000377755 SPATA31A7Q8IWB4 1347 aa16.94■□□□□ 0.3
KRT40-201ENST00000377755 CYP27B1O15528 508 aa16.93■□□□□ 0.3
KRT40-201ENST00000377755 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
KRT40-201ENST00000377755 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
KRT40-201ENST00000377755 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
KRT40-201ENST00000377755 ZNF853P0CG23 659 aa16.93■□□□□ 0.3
KRT40-201ENST00000377755 PHKG2P15735 406 aa16.93■□□□□ 0.3
KRT40-201ENST00000377755 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
KRT40-201ENST00000377755 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
KRT40-201ENST00000377755 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
KRT40-201ENST00000377755 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
KRT40-201ENST00000377755 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
KRT40-201ENST00000377755 VPS72Q15906 364 aa16.92■□□□□ 0.3
KRT40-201ENST00000377755 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
KRT40-201ENST00000377755 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
KRT40-201ENST00000377755 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
KRT40-201ENST00000377755 AFF2P51816 1311 aa16.91■□□□□ 0.3
KRT40-201ENST00000377755 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
KRT40-201ENST00000377755 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
KRT40-201ENST00000377755 GNAI1P63096 354 aa16.91■□□□□ 0.3
KRT40-201ENST00000377755 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
KRT40-201ENST00000377755 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
KRT40-201ENST00000377755 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
KRT40-201ENST00000377755 CHL1O00533 1208 aa16.89■□□□□ 0.29
KRT40-201ENST00000377755 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
KRT40-201ENST00000377755 MIS18AQ9NYP9 233 aa16.89■□□□□ 0.29
KRT40-201ENST00000377755 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
KRT40-201ENST00000377755 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
KRT40-201ENST00000377755 NEFLP07196 543 aa16.89■□□□□ 0.29
KRT40-201ENST00000377755 EXOSC9Q06265 439 aaKnown RBP16.88■□□□□ 0.29
KRT40-201ENST00000377755 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
KRT40-201ENST00000377755 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
KRT40-201ENST00000377755 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
KRT40-201ENST00000377755 SHANK3Q9BYB0 1731 aa16.88■□□□□ 0.29
KRT40-201ENST00000377755 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
KRT40-201ENST00000377755 EXOC5O00471 708 aa16.86■□□□□ 0.29
KRT40-201ENST00000377755 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
KRT40-201ENST00000377755 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
KRT40-201ENST00000377755 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
KRT40-201ENST00000377755 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
KRT40-201ENST00000377755 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
KRT40-201ENST00000377755 TEFQ10587 303 aa16.86■□□□□ 0.29
KRT40-201ENST00000377755 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
KRT40-201ENST00000377755 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
KRT40-201ENST00000377755 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
KRT40-201ENST00000377755 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
KRT40-201ENST00000377755 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
KRT40-201ENST00000377755 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
KRT40-201ENST00000377755 GJD4Q96KN9 370 aaPredicted RBP16.84■□□□□ 0.29
KRT40-201ENST00000377755 DDB1Q16531 1140 aa16.84■□□□□ 0.29
KRT40-201ENST00000377755 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
KRT40-201ENST00000377755 ATRNO75882 1429 aa16.83■□□□□ 0.29
KRT40-201ENST00000377755 SCN11AQ9UI33 1791 aa16.83■□□□□ 0.29
KRT40-201ENST00000377755 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 TSPYL6Q8N831 410 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 C8orf58Q8NAV2 365 aa16.82■□□□□ 0.28
KRT40-201ENST00000377755 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms