RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 USP19O94966 1318 aa12.53□□□□□ -0.4
CBWD1-204ENST00000377447 STRCP1A6NGW2 1772 aa12.52□□□□□ -0.41
CBWD1-204ENST00000377447 CHL1O00533 1208 aa12.52□□□□□ -0.41
CBWD1-204ENST00000377447 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
CBWD1-204ENST00000377447 ESCO1Q5FWF5 840 aa12.51□□□□□ -0.41
CBWD1-204ENST00000377447 TMEM94Q12767 1356 aa12.51□□□□□ -0.41
CBWD1-204ENST00000377447 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
CBWD1-204ENST00000377447 ANKRD45Q5TZF3 282 aa12.51□□□□□ -0.41
CBWD1-204ENST00000377447 API5Q9BZZ5 524 aaKnown RBP12.51□□□□□ -0.41
CBWD1-204ENST00000377447 CHMP4BQ9H444 224 aaKnown RBP12.5□□□□□ -0.41
CBWD1-204ENST00000377447 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
CBWD1-204ENST00000377447 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
CBWD1-204ENST00000377447 HOXC9P31274 260 aa12.5□□□□□ -0.41
CBWD1-204ENST00000377447 ABCC4O15439 1325 aa12.5□□□□□ -0.41
CBWD1-204ENST00000377447 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
CBWD1-204ENST00000377447 DEKP35659 375 aaKnown RBP12.49□□□□□ -0.41
CBWD1-204ENST00000377447 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
CBWD1-204ENST00000377447 NUCB1Q02818 461 aa12.49□□□□□ -0.41
CBWD1-204ENST00000377447 PSME1Q06323 249 aa12.49□□□□□ -0.41
CBWD1-204ENST00000377447 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
CBWD1-204ENST00000377447 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
CBWD1-204ENST00000377447 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
CBWD1-204ENST00000377447 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
CBWD1-204ENST00000377447 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
CBWD1-204ENST00000377447 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
CBWD1-204ENST00000377447 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
CBWD1-204ENST00000377447 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
CBWD1-204ENST00000377447 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
CBWD1-204ENST00000377447 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
CBWD1-204ENST00000377447 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
CBWD1-204ENST00000377447 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
CBWD1-204ENST00000377447 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
CBWD1-204ENST00000377447 KDRP35968 1356 aa12.46□□□□□ -0.41
CBWD1-204ENST00000377447 SLC4A10Q6U841 1118 aa12.46□□□□□ -0.41
CBWD1-204ENST00000377447 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.41
CBWD1-204ENST00000377447 CRB1P82279 1406 aa12.46□□□□□ -0.41
CBWD1-204ENST00000377447 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.42
CBWD1-204ENST00000377447 GCC1Q96CN9 775 aa12.46□□□□□ -0.42
CBWD1-204ENST00000377447 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.42
CBWD1-204ENST00000377447 BECN1Q14457 450 aa12.45□□□□□ -0.42
CBWD1-204ENST00000377447 SLKQ9H2G2 1235 aaPredicted RBP12.45□□□□□ -0.42
CBWD1-204ENST00000377447 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
CBWD1-204ENST00000377447 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
CBWD1-204ENST00000377447 KIAA0232Q92628 1395 aa12.45□□□□□ -0.42
CBWD1-204ENST00000377447 F6X3S4 739 aa12.44□□□□□ -0.42
CBWD1-204ENST00000377447 APBB1O00213 710 aa12.44□□□□□ -0.42
CBWD1-204ENST00000377447 NFKBIBQ15653 356 aa12.44□□□□□ -0.42
CBWD1-204ENST00000377447 ATF3P18847 181 aa12.43□□□□□ -0.42
CBWD1-204ENST00000377447 INTS3Q68E01 1043 aaKnown RBP12.43□□□□□ -0.42
CBWD1-204ENST00000377447 G2E3Q7L622 706 aa12.43□□□□□ -0.42
CBWD1-204ENST00000377447 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
CBWD1-204ENST00000377447 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
CBWD1-204ENST00000377447 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
CBWD1-204ENST00000377447 MSH6P52701 1360 aa12.43□□□□□ -0.42
CBWD1-204ENST00000377447 MEIS3Q99687 375 aa12.42□□□□□ -0.42
CBWD1-204ENST00000377447 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
CBWD1-204ENST00000377447 PTPRCP08575 1304 aa12.42□□□□□ -0.42
CBWD1-204ENST00000377447 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
CBWD1-204ENST00000377447 IL17REQ8NFR9 667 aa12.42□□□□□ -0.42
CBWD1-204ENST00000377447 LTN1O94822 1766 aa12.42□□□□□ -0.42
CBWD1-204ENST00000377447 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
CBWD1-204ENST00000377447 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
CBWD1-204ENST00000377447 LRRC59Q96AG4 307 aaKnown RBP12.41□□□□□ -0.42
CBWD1-204ENST00000377447 RGS12O14924 1447 aa12.41□□□□□ -0.42
CBWD1-204ENST00000377447 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.42
CBWD1-204ENST00000377447 FKBP5Q13451 457 aaPredicted RBP12.4□□□□□ -0.42
CBWD1-204ENST00000377447 IP6K1Q92551 441 aa12.4□□□□□ -0.42
CBWD1-204ENST00000377447 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
CBWD1-204ENST00000377447 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
CBWD1-204ENST00000377447 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
CBWD1-204ENST00000377447 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
CBWD1-204ENST00000377447 XIRP1Q702N8 1843 aaKnown RBP12.4□□□□□ -0.42
CBWD1-204ENST00000377447 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
CBWD1-204ENST00000377447 FRAT2O75474 233 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-204ENST00000377447 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
CBWD1-204ENST00000377447 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-204ENST00000377447 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
CBWD1-204ENST00000377447 C16orf71Q8IYS4 520 aaPredicted RBP12.39□□□□□ -0.43
CBWD1-204ENST00000377447 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
CBWD1-204ENST00000377447 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 ANKRD44Q8N8A2 993 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 DCTPP1Q9H773 170 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 GCP02774 474 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 FLIIQ13045 1269 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 RPAP2Q8IXW5 612 aaPredicted RBP12.38□□□□□ -0.43
CBWD1-204ENST00000377447 DDX17Q92841 729 aaKnown RBP12.38□□□□□ -0.43
CBWD1-204ENST00000377447 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
CBWD1-204ENST00000377447 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
CBWD1-204ENST00000377447 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-204ENST00000377447 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
CBWD1-204ENST00000377447 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
CBWD1-204ENST00000377447 ATP10DQ9P241 1426 aa12.36□□□□□ -0.43
CBWD1-204ENST00000377447 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
CBWD1-204ENST00000377447 C1orf167Q5SNV9 1468 aa12.36□□□□□ -0.43
CBWD1-204ENST00000377447 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
CBWD1-204ENST00000377447 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
CBWD1-204ENST00000377447 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
CBWD1-204ENST00000377447 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
CBWD1-204ENST00000377447 MST1RQ04912 1400 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms