RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 WNK3Q9BYP7 1800 aa29.96■■■□□ 2.39
CBWD1-203ENST00000377400 RGS12O14924 1447 aa29.96■■■□□ 2.39
CBWD1-203ENST00000377400 PRKAR2BP31323 418 aa29.95■■■□□ 2.39
CBWD1-203ENST00000377400 FCHSD2O94868 740 aa29.95■■■□□ 2.38
CBWD1-203ENST00000377400 PARP4Q9UKK3 1724 aaKnown RBP29.94■■■□□ 2.38
CBWD1-203ENST00000377400 ZCRB1Q8TBF4 217 aaKnown RBP29.94■■■□□ 2.38
CBWD1-203ENST00000377400 PNNQ9H307 717 aaKnown RBP29.94■■■□□ 2.38
CBWD1-203ENST00000377400 OVOS2A0A0G2JMS6 1433 aa29.94■■■□□ 2.38
CBWD1-203ENST00000377400 RSPH6AQ9H0K4 717 aa29.93■■■□□ 2.38
CBWD1-203ENST00000377400 SPG7Q9UQ90 795 aa29.93■■■□□ 2.38
CBWD1-203ENST00000377400 THSD7AQ9UPZ6 1657 aa29.93■■■□□ 2.38
CBWD1-203ENST00000377400 DDX54Q8TDD1 881 aaKnown RBP29.92■■■□□ 2.38
CBWD1-203ENST00000377400 ADAMTS8Q9UP79 889 aa29.92■■■□□ 2.38
CBWD1-203ENST00000377400 PLEKHO1Q53GL0 409 aaPredicted RBP29.92■■■□□ 2.38
CBWD1-203ENST00000377400 FAM9BQ8IZU0 186 aa29.92■■■□□ 2.38
CBWD1-203ENST00000377400 PNISRQ8TF01 805 aaKnown RBP29.9■■■□□ 2.38
CBWD1-203ENST00000377400 LRRC37A3O60309 1634 aa29.9■■■□□ 2.38
CBWD1-203ENST00000377400 TNS2Q63HR2 1409 aa29.9■■■□□ 2.38
CBWD1-203ENST00000377400 AMOTQ4VCS5 1084 aa29.9■■■□□ 2.38
CBWD1-203ENST00000377400 KRT27Q7Z3Y8 459 aa29.9■■■□□ 2.38
CBWD1-203ENST00000377400 MAPK8IP3Q9UPT6 1336 aa29.89■■■□□ 2.38
CBWD1-203ENST00000377400 CCDC146Q8IYE0 955 aa29.87■■■□□ 2.37
CBWD1-203ENST00000377400 PCDH11XQ9BZA7 1347 aa29.87■■■□□ 2.37
CBWD1-203ENST00000377400 PCDH11YQ9BZA8 1340 aa29.87■■■□□ 2.37
CBWD1-203ENST00000377400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.86■■■□□ 2.371e-6■■■■□ 25.6
CBWD1-203ENST00000377400 ZNF530Q6P9A1 599 aaPredicted RBP29.85■■■□□ 2.37
CBWD1-203ENST00000377400 C1orf141Q5JVX7 400 aa29.84■■■□□ 2.37
CBWD1-203ENST00000377400 FAM182BQ5T319 152 aa29.84■■■□□ 2.37
CBWD1-203ENST00000377400 PHACTR3Q96KR7 559 aa29.84■■■□□ 2.37
CBWD1-203ENST00000377400 PLEKHG2Q9H7P9 1386 aa29.83■■■□□ 2.37
CBWD1-203ENST00000377400 BRWD3Q6RI45 1802 aa29.82■■■□□ 2.36
CBWD1-203ENST00000377400 MTHFSDQ2M296 383 aaKnown RBP29.82■■■□□ 2.36
CBWD1-203ENST00000377400 MARCH10Q8NA82 808 aaPredicted RBP29.82■■■□□ 2.36
CBWD1-203ENST00000377400 IFNL2Q8IZJ0 200 aa29.81■■■□□ 2.36
CBWD1-203ENST00000377400 GAS2L2Q8NHY3 880 aa29.81■■■□□ 2.36
CBWD1-203ENST00000377400 PLEKHF1Q96S99 279 aa29.81■■■□□ 2.36
CBWD1-203ENST00000377400 RUNDC1Q96C34 613 aa29.8■■■□□ 2.36
CBWD1-203ENST00000377400 PKD1L3Q7Z443 1732 aa29.8■■■□□ 2.36
CBWD1-203ENST00000377400 CYP27B1O15528 508 aa29.79■■■□□ 2.36
CBWD1-203ENST00000377400 PHKG2P15735 406 aa29.77■■■□□ 2.36
CBWD1-203ENST00000377400 SHANK3Q9BYB0 1731 aa29.75■■■□□ 2.35
CBWD1-203ENST00000377400 AKAP4Q5JQC9 854 aa29.75■■■□□ 2.35
CBWD1-203ENST00000377400 HSP90AB1P08238 724 aaKnown RBP29.74■■■□□ 2.35
CBWD1-203ENST00000377400 FAM196AQ6ZSG2 479 aa29.74■■■□□ 2.35
CBWD1-203ENST00000377400 NEUROD2Q15784 382 aa29.73■■■□□ 2.35
CBWD1-203ENST00000377400 ILDR2Q71H61 639 aa29.72■■■□□ 2.35
CBWD1-203ENST00000377400 NFE2L2Q16236 605 aa29.72■■■□□ 2.35
CBWD1-203ENST00000377400 RRP7AQ9Y3A4 280 aaKnown RBP29.72■■■□□ 2.35
CBWD1-203ENST00000377400 GNAT3A8MTJ3 354 aa29.71■■■□□ 2.35
CBWD1-203ENST00000377400 MPRIPQ6WCQ1 1025 aa29.71■■■□□ 2.35
CBWD1-203ENST00000377400 RTF1Q92541 710 aaKnown RBP29.71■■■□□ 2.35
CBWD1-203ENST00000377400 ACSBG1Q96GR2 724 aa29.71■■■□□ 2.35
CBWD1-203ENST00000377400 SENP3-EIF4A1A0A087X0R7 540 aa29.7■■■□□ 2.35
CBWD1-203ENST00000377400 SYTL4Q96C24 671 aaPredicted RBP29.7■■■□□ 2.35
CBWD1-203ENST00000377400 MAP3K5Q99683 1374 aa29.7■■■□□ 2.35
CBWD1-203ENST00000377400 APAF1O14727 1248 aa29.69■■■□□ 2.34
CBWD1-203ENST00000377400 DCAF5Q96JK2 942 aa29.69■■■□□ 2.34
CBWD1-203ENST00000377400 RIPK4P57078 832 aa29.68■■■□□ 2.34
CBWD1-203ENST00000377400 TMPOP42166 694 aaKnown RBP29.67■■■□□ 2.34
CBWD1-203ENST00000377400 NKX1-1Q15270 411 aaPredicted RBP29.67■■■□□ 2.34
CBWD1-203ENST00000377400 KAT6BQ8WYB5 2073 aa29.66■■■□□ 2.34
CBWD1-203ENST00000377400 EP400Q96L91 3159 aa29.65■■■□□ 2.34
CBWD1-203ENST00000377400 TRIM37O94972 964 aa29.63■■■□□ 2.33
CBWD1-203ENST00000377400 PRIM1P49642 420 aaKnown RBP29.62■■■□□ 2.33
CBWD1-203ENST00000377400 LMOD3Q0VAK6 560 aa29.62■■■□□ 2.33
CBWD1-203ENST00000377400 LGR6Q9HBX8 967 aa29.62■■■□□ 2.33
CBWD1-203ENST00000377400 SALL2Q9Y467 1007 aaPredicted RBP29.62■■■□□ 2.33
CBWD1-203ENST00000377400 RNMTO43148 476 aaKnown RBP29.62■■■□□ 2.33
CBWD1-203ENST00000377400 MCM10Q7L590 875 aa29.62■■■□□ 2.33
CBWD1-203ENST00000377400 CABP4P57796 275 aa29.61■■■□□ 2.33
CBWD1-203ENST00000377400 DCTN1Q14203 1278 aa29.61■■■□□ 2.33
CBWD1-203ENST00000377400 BCL9O00512 1426 aa29.6■■■□□ 2.33
CBWD1-203ENST00000377400 KDM6AO15550 1401 aaPredicted RBP29.6■■■□□ 2.33
CBWD1-203ENST00000377400 DOT1LQ8TEK3 1739 aa29.6■■■□□ 2.33
CBWD1-203ENST00000377400 KCNQ2O43526 872 aa29.59■■■□□ 2.33
CBWD1-203ENST00000377400 HTATSF1O43719 755 aaKnown RBP29.59■■■□□ 2.33
CBWD1-203ENST00000377400 TMOD3Q9NYL9 352 aa29.59■■■□□ 2.33
CBWD1-203ENST00000377400 TEFQ10587 303 aa29.59■■■□□ 2.33
CBWD1-203ENST00000377400 ERVV-2B6SEH9 535 aa29.58■■■□□ 2.33
CBWD1-203ENST00000377400 IL17REQ8NFR9 667 aa29.58■■■□□ 2.33
CBWD1-203ENST00000377400 SF3B2Q13435 895 aaKnown RBP29.57■■■□□ 2.32
CBWD1-203ENST00000377400 DLG5Q8TDM6 1919 aa29.57■■■□□ 2.32
CBWD1-203ENST00000377400 BCL11BQ9C0K0 894 aaPredicted RBP29.56■■■□□ 2.32
CBWD1-203ENST00000377400 NFATC2IPQ8NCF5 419 aa29.55■■■□□ 2.32
CBWD1-203ENST00000377400 THUMPD2Q9BTF0 503 aaKnown RBP29.55■■■□□ 2.32
CBWD1-203ENST00000377400 TOGARAM1Q9Y4F4 1720 aa29.54■■■□□ 2.32
CBWD1-203ENST00000377400 SLC52A2Q9HAB3 445 aa29.54■■■□□ 2.32
CBWD1-203ENST00000377400 PTF1AQ7RTS3 328 aa29.53■■■□□ 2.32
CBWD1-203ENST00000377400 SCN11AQ9UI33 1791 aa29.53■■■□□ 2.32
CBWD1-203ENST00000377400 SBF2Q86WG5 1849 aa29.52■■■□□ 2.32
CBWD1-203ENST00000377400 TRIM35Q9UPQ4 493 aa29.52■■■□□ 2.32
CBWD1-203ENST00000377400 NHSQ6T4R5 1651 aa29.52■■■□□ 2.32
CBWD1-203ENST00000377400 PIGBQ92521 554 aa29.52■■■□□ 2.32
CBWD1-203ENST00000377400 APBA3O96018 575 aa29.5■■■□□ 2.31
CBWD1-203ENST00000377400 CEMIPQ8WUJ3 1361 aa29.5■■■□□ 2.31
CBWD1-203ENST00000377400 VIRMAQ69YN4 1812 aaKnown RBP29.49■■■□□ 2.31
CBWD1-203ENST00000377400 ITGB4P16144 1822 aa29.48■■■□□ 2.31
CBWD1-203ENST00000377400 HNRNPUQ00839 825 aaKnown RBP eCLIP29.47■■■□□ 2.31
CBWD1-203ENST00000377400 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
CBWD1-203ENST00000377400 CCDC125Q86Z20 511 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms