RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 IFT57Q9NWB7 429 aa10.38□□□□□ -0.75
CRNKL1-202ENST00000377340 ANO2Q9NQ90 1003 aa10.38□□□□□ -0.75
CRNKL1-202ENST00000377340 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
CRNKL1-202ENST00000377340 KDM5DQ9BY66 1539 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 PI4KAP2A4QPH2 592 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 RBM5P52756 815 aaKnown RBP eCLIP10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 PI4KAP1Q8N8J0 262 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 SLKQ9H2G2 1235 aaPredicted RBP10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 CEP126Q9P2H0 1117 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 GOLGA6L4A6NEF3 574 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 ZNF622Q969S3 477 aaKnown RBP eCLIP10.37□□□□□ -0.754e-8■■□□□ 12.8
CRNKL1-202ENST00000377340 FANCIQ9NVI1 1328 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 LRRFIP1Q32MZ4 808 aaKnown RBP10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 ERICH6BQ5W0A0 696 aa10.37□□□□□ -0.75
CRNKL1-202ENST00000377340 AKAP4Q5JQC9 854 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 AMOTL1Q8IY63 956 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 STK11IPQ8N1F8 1099 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 PUS7Q96PZ0 661 aaKnown RBP10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 DHX16O60231 1041 aaKnown RBP10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 COPS6Q7L5N1 327 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 PRDM15P57071 1507 aaPredicted RBP10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 FKBP4Q02790 459 aaKnown RBP eCLIP10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
CRNKL1-202ENST00000377340 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 APBA3O96018 575 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 IGHMBP2P38935 993 aaKnown RBP10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 FLIIQ13045 1269 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 UBE3BQ7Z3V4 1068 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 FSD1Q9BTV5 496 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 COL17A1Q9UMD9 1497 aaPredicted RBP10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 ARHGEF10O15013 1369 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 TEX13AQ9BXU3 409 aaPredicted RBP10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 ERC2O15083 957 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 NBPF5PQ86XG9 351 aaPredicted RBP10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 DNAAF4Q8WXU2 420 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 ABCF2Q9UG63 623 aa10.35□□□□□ -0.75
CRNKL1-202ENST00000377340 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 CHPF2Q9P2E5 772 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 MAP3K2Q9Y2U5 619 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 NLRP1Q9C000 1473 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 DCAF5Q96JK2 942 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 PRR36Q9H6K5 1346 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 RPGRQ92834 1020 aaKnown RBP10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 KIAA0232Q92628 1395 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 GNPATO15228 680 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 METTL24Q5JXM2 366 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 FOXD4L4Q8WXT5 416 aaPredicted RBP10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
CRNKL1-202ENST00000377340 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 RTCBQ9Y3I0 505 aaKnown RBP10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 ABCC3O15438 1527 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 TTC39AQ5SRH9 613 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 C8orf58Q8NAV2 365 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
CRNKL1-202ENST00000377340 RARSP54136 660 aaKnown RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 GNL3LQ9NVN8 582 aaKnown RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 CDC42BPAQ5VT25 1732 aa10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 TRDNQ13061 729 aa10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 IFIT5Q13325 482 aaKnown RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 SETDB2Q96T68 719 aa10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 NIP7Q9Y221 180 aaKnown RBP eCLIP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 FOXD4L6Q3SYB3 417 aaPredicted RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 FOXD4L3Q6VB84 417 aaPredicted RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 AACSQ86V21 672 aa10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 CLSTN1O94985 981 aa10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 ZKSCAN1P17029 563 aaPredicted RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 CTDP1Q9Y5B0 961 aaPredicted RBP10.32□□□□□ -0.76
CRNKL1-202ENST00000377340 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 KCNQ4P56696 695 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 CCDC24Q8N4L8 307 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 TRPC5Q9UL62 973 aaPredicted RBP10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 PCDH11XQ9BZA7 1347 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 PCDH11YQ9BZA8 1340 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 CT47B1P0C2W7 299 aaPredicted RBP10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 HSP90AB3PQ58FF7 597 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 EDC4Q6P2E9 1401 aaKnown RBP10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 RXRBP28702 533 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 ZSCAN29Q8IWY8 852 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms